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The map label for this gene is ugpA [H]

Identifier: 94310992

GI number: 94310992

Start: 2225307

End: 2226188

Strand: Reverse

Name: ugpA [H]

Synonym: Rmet_2054

Alternate gene names: 94310992

Gene position: 2226188-2225307 (Counterclockwise)

Preceding gene: 94310993

Following gene: 94310991

Centisome position: 56.67

GC content: 60.32

Gene sequence:

>882_bases
ATGGAAAAGCGCGTCGTCTTTCGCTCTCCGTGGTTGCCGTATCTGCTGGTGCTGCCGCAGATCGCCATCACGCTGATCTT
CTTCTTTTTGCCCGCCGGGCAAGCGCTGTGGCAGTCGATGCTGCAGCAAGATGCCTTCGGCATCAATCTCGAGTTCGTCG
GGCTCGATAACTTCGTTACGCTGTGGAAGGACCCGCAGTACATCGAGTCCTTCCAGACCACTGCGATCTTCGCCATTGGC
GTGACGGTGGTGGGCCTGTCCGTGGCGTTGCTGCTGGCGTACTTCGCCGATCGCGTCATACGCGCCGCCACTGGCTACAA
GACCCTGCTGATCTGGCCGTACGCGGTGGCGCCTGCCGTGGCCGGCGTGCTCTGGATGTTCATGTTCAACCCAACCCTGG
GCGTGGTGTCCTACGCGCTGCGCAAAGCAGGCGTGGACTGGAACTTCCTGCTCAATGGCAACCAGGCACTGCTGCTGGTG
GTGCTGGCGGCCGCATGGAAGCAGGTCAGCTACAACTTCCTGTTCTTCCTGGCCGGGCTACAGAGCATTCCGAAATCGCT
GATCGAGGCCGCTGCCATCGACGGCGCGGGCCCGTGGAAGCGCTTCTGGTCGATCGTGTTCCCGCTGCTGTCGCCCACCA
CCTTCTTCCTGCTCGTGATCAACATGGTCTACGCCTTCTTCGATACCTTTGCGATCATCGATGCGGTGACCCACGGCGGC
CCGTTCAACTCGACGAACACGCTCGTCTACAAAGTGTTCCATGATGGCTTCCGTGGCATGGATATTGGTGGCTCGGCCGC
ACAGTCGGTGGTGCTGATGGTGATCGTGATCGCGCTGACAGTGGTGCAGTTCCGATTCGTGGAACGCAAGGTCCAGTATT
GA

Upstream 100 bases:

>100_bases
TTCCAGAAGACCGCCAGGGAATAAGCCCCTGCGGTGATGGAGCTGAAGCGGGCGGCGGCACAATCGTCGCCCGTTTGCGT
TTGTTTTGGGAACCCCCTCG

Downstream 100 bases:

>100_bases
GGAGCCAGCCATGGTAGAACGACGTCCCGTACTCGACTTTATTACTCACCTCGTGCTGATCGTCGGTATCGCGATCGTGG
CATTTCCGGTGTACCTGACC

Product: glycerol-3-phosphate ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEKRVVFRSPWLPYLLVLPQIAITLIFFFLPAGQALWQSMLQQDAFGINLEFVGLDNFVTLWKDPQYIESFQTTAIFAIG
VTVVGLSVALLLAYFADRVIRAATGYKTLLIWPYAVAPAVAGVLWMFMFNPTLGVVSYALRKAGVDWNFLLNGNQALLLV
VLAAAWKQVSYNFLFFLAGLQSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLLVINMVYAFFDTFAIIDAVTHGG
PFNSTNTLVYKVFHDGFRGMDIGGSAAQSVVLMVIVIALTVVQFRFVERKVQY

Sequences:

>Translated_293_residues
MEKRVVFRSPWLPYLLVLPQIAITLIFFFLPAGQALWQSMLQQDAFGINLEFVGLDNFVTLWKDPQYIESFQTTAIFAIG
VTVVGLSVALLLAYFADRVIRAATGYKTLLIWPYAVAPAVAGVLWMFMFNPTLGVVSYALRKAGVDWNFLLNGNQALLLV
VLAAAWKQVSYNFLFFLAGLQSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLLVINMVYAFFDTFAIIDAVTHGG
PFNSTNTLVYKVFHDGFRGMDIGGSAAQSVVLMVIVIALTVVQFRFVERKVQY
>Mature_293_residues
MEKRVVFRSPWLPYLLVLPQIAITLIFFFLPAGQALWQSMLQQDAFGINLEFVGLDNFVTLWKDPQYIESFQTTAIFAIG
VTVVGLSVALLLAYFADRVIRAATGYKTLLIWPYAVAPAVAGVLWMFMFNPTLGVVSYALRKAGVDWNFLLNGNQALLLV
VLAAAWKQVSYNFLFFLAGLQSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLLVINMVYAFFDTFAIIDAVTHGG
PFNSTNTLVYKVFHDGFRGMDIGGSAAQSVVLMVIVIALTVVQFRFVERKVQY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=59.9315068493151, Blast_Score=340, Evalue=9e-95,
Organism=Escherichia coli, GI1787570, Length=258, Percent_Identity=34.1085271317829, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=25.8823529411765, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32680; Mature: 32680

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRVVFRSPWLPYLLVLPQIAITLIFFFLPAGQALWQSMLQQDAFGINLEFVGLDNFVT
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCE
LWKDPQYIESFQTTAIFAIGVTVVGLSVALLLAYFADRVIRAATGYKTLLIWPYAVAPAV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
AGVLWMFMFNPTLGVVSYALRKAGVDWNFLLNGNQALLLVVLAAAWKQVSYNFLFFLAGL
HHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLLVINMVYAFFDTFAIIDAVTHGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFNSTNTLVYKVFHDGFRGMDIGGSAAQSVVLMVIVIALTVVQFRFVERKVQY
CCCCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKRVVFRSPWLPYLLVLPQIAITLIFFFLPAGQALWQSMLQQDAFGINLEFVGLDNFVT
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCE
LWKDPQYIESFQTTAIFAIGVTVVGLSVALLLAYFADRVIRAATGYKTLLIWPYAVAPAV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
AGVLWMFMFNPTLGVVSYALRKAGVDWNFLLNGNQALLLVVLAAAWKQVSYNFLFFLAGL
HHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIPKSLIEAAAIDGAGPWKRFWSIVFPLLSPTTFFLLVINMVYAFFDTFAIIDAVTHGG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFNSTNTLVYKVFHDGFRGMDIGGSAAQSVVLMVIVIALTVVQFRFVERKVQY
CCCCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]