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The map label for this gene is dppC [H]

Identifier: 94310872

GI number: 94310872

Start: 2103010

End: 2103897

Strand: Direct

Name: dppC [H]

Synonym: Rmet_1934

Alternate gene names: 94310872

Gene position: 2103010-2103897 (Clockwise)

Preceding gene: 94310871

Following gene: 94310873

Centisome position: 53.54

GC content: 62.61

Gene sequence:

>888_bases
ATGGAAATGACATTGAACAAGGCCGTGGCACCGCTTCCCGTGGAGCGTTCACCCGGATACTGGACCACGGTCTGCCGCCG
GCTGCTGCGCAACAAGCTCGCGATGCTGGCCGCACTGATCCTGATCGTGCTTGTCCTGACGGCGATCTTCGCGCCGGCGC
TGATGCCTGCCGACCCCTATGCGTCGTCGATTCTCAAGCGATTGAAGCCGATCGGCTTCGACGGTCACCTGCTTGGCACC
GACGAACTGGGCCGCGACATGCTGTCGCGCCTGATGCTTGGCGGGCGGTTGTCGCTATTCATGGGCATCACGCCGGTACT
GCTCGCCTTCCTGATCGGCAGCACGATCGGCATCGTCGCCGGTTATGCGGGTGGCTGGACGAACACCGTCATCATGCGGC
TCACCGACATCCTCTATGCGTTTCCCTCGGTACTGCTGGCCATCGCGCTATCCGGCACACTGGGCGCGGGGGTTGGCAAC
GCATTGTTATCGTTGACCATCGTGTTCGTGCCGCAGATCGTTCGCGTCGCCGAAAGCGTGACCACGCAGGTACGCAACCG
GGAATTCGTCGATGCCGCCCGCGCCTCGGGCGCATCGTCGCTGACCATCGTGCGCGTGCATGTCCTCAACAACGTGCTCG
GCCCAATCTTCGTTTATGCCACGAGCCTGATCTCGGTCTCGATGATCCTGGCTTCCGGGCTGTCGTTCCTGGGGCTTGGC
GTCAAGCCACCGGAGCCCGAATGGGGCCTGATGCTGAACACCCTGCGCACCGCCATCTACACCCAGCCATGGGTGGCCGC
GTTGCCCGGCGCGATGATCTTCCTGACCTCGATCTCGTTCAACCTGCTGGCCGATGGCATTCGCTCGGCCATGGAAATCA
AGGAGTAA

Upstream 100 bases:

>100_bases
ATTCTCGTCCTGGCCGTGTTCTTCGTGATGCTGAACCTGCTGGTCGACGCGTTGCAGACATTGTTCGACCCCCGTATCCA
ACGCAACTGAGGACGCCACG

Downstream 100 bases:

>100_bases
GCATGGTTGAAACGCATGCCCCCCTGCCTACCGCCCCCACAGATGTCGGCGGCCGGGCGCAGCCACTGCTCATCGCGCGC
CAGTTGGTCAAGCACTTTCC

Product: putative peptide transporter permease subunit: membrane component of ABC superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MEMTLNKAVAPLPVERSPGYWTTVCRRLLRNKLAMLAALILIVLVLTAIFAPALMPADPYASSILKRLKPIGFDGHLLGT
DELGRDMLSRLMLGGRLSLFMGITPVLLAFLIGSTIGIVAGYAGGWTNTVIMRLTDILYAFPSVLLAIALSGTLGAGVGN
ALLSLTIVFVPQIVRVAESVTTQVRNREFVDAARASGASSLTIVRVHVLNNVLGPIFVYATSLISVSMILASGLSFLGLG
VKPPEPEWGLMLNTLRTAIYTQPWVAALPGAMIFLTSISFNLLADGIRSAMEIKE

Sequences:

>Translated_295_residues
MEMTLNKAVAPLPVERSPGYWTTVCRRLLRNKLAMLAALILIVLVLTAIFAPALMPADPYASSILKRLKPIGFDGHLLGT
DELGRDMLSRLMLGGRLSLFMGITPVLLAFLIGSTIGIVAGYAGGWTNTVIMRLTDILYAFPSVLLAIALSGTLGAGVGN
ALLSLTIVFVPQIVRVAESVTTQVRNREFVDAARASGASSLTIVRVHVLNNVLGPIFVYATSLISVSMILASGLSFLGLG
VKPPEPEWGLMLNTLRTAIYTQPWVAALPGAMIFLTSISFNLLADGIRSAMEIKE
>Mature_295_residues
MEMTLNKAVAPLPVERSPGYWTTVCRRLLRNKLAMLAALILIVLVLTAIFAPALMPADPYASSILKRLKPIGFDGHLLGT
DELGRDMLSRLMLGGRLSLFMGITPVLLAFLIGSTIGIVAGYAGGWTNTVIMRLTDILYAFPSVLLAIALSGTLGAGVGN
ALLSLTIVFVPQIVRVAESVTTQVRNREFVDAARASGASSLTIVRVHVLNNVLGPIFVYATSLISVSMILASGLSFLGLG
VKPPEPEWGLMLNTLRTAIYTQPWVAALPGAMIFLTSISFNLLADGIRSAMEIKE

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=40.5017921146953, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=38.9312977099237, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1789964, Length=299, Percent_Identity=37.4581939799331, Blast_Score=167, Evalue=6e-43,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=37.2384937238494, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1787498, Length=294, Percent_Identity=32.6530612244898, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787549, Length=285, Percent_Identity=32.280701754386, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI1788505, Length=220, Percent_Identity=26.8181818181818, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31507; Mature: 31507

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMTLNKAVAPLPVERSPGYWTTVCRRLLRNKLAMLAALILIVLVLTAIFAPALMPADPY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ASSILKRLKPIGFDGHLLGTDELGRDMLSRLMLGGRLSLFMGITPVLLAFLIGSTIGIVA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYAGGWTNTVIMRLTDILYAFPSVLLAIALSGTLGAGVGNALLSLTIVFVPQIVRVAESV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TTQVRNREFVDAARASGASSLTIVRVHVLNNVLGPIFVYATSLISVSMILASGLSFLGLG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
VKPPEPEWGLMLNTLRTAIYTQPWVAALPGAMIFLTSISFNLLADGIRSAMEIKE
CCCCCCCHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEMTLNKAVAPLPVERSPGYWTTVCRRLLRNKLAMLAALILIVLVLTAIFAPALMPADPY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ASSILKRLKPIGFDGHLLGTDELGRDMLSRLMLGGRLSLFMGITPVLLAFLIGSTIGIVA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYAGGWTNTVIMRLTDILYAFPSVLLAIALSGTLGAGVGNALLSLTIVFVPQIVRVAESV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TTQVRNREFVDAARASGASSLTIVRVHVLNNVLGPIFVYATSLISVSMILASGLSFLGLG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
VKPPEPEWGLMLNTLRTAIYTQPWVAALPGAMIFLTSISFNLLADGIRSAMEIKE
CCCCCCCHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA