| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94310848
Identifier: 94310848
GI number: 94310848
Start: 2079344
End: 2080279
Strand: Reverse
Name: 94310848
Synonym: Rmet_1910
Alternate gene names: NA
Gene position: 2080279-2079344 (Counterclockwise)
Preceding gene: 94310849
Following gene: 94310847
Centisome position: 52.96
GC content: 65.28
Gene sequence:
>936_bases ATGGCGGGCGCCAGCTCGGCTGATTCCTTTTCTTCTCAGTTCAACGTATCCATGCACGCACGCAAGACCATCATCACCTG CGCGGTGACCGGCAATATCGTCAAGCCAGACCAGCATCCCGGTCTGCCCATCACACCGGAACAGATCGCCAACGCCGCGC TCGAAGCGGCCGACGCTGGCGCTGCCGTCGCGCACATCCATGTACGCGATCCGGAAACGGGCAAGCCGTCGATGCGTCTC GATTACTACGCCGACGTGATCGACCGCATCCGCGCGCGCAACCGTGCGCTGATCATCAACCTGACCACGGGCCCCGGCGG GCGCTTTGTGCCCGACGAGGACGAGCCGCGCGTGGCTGCGGCGGGTACCACGCTGCTGCATCCGCTCAAGCGCGTCGAGC ACATCGCCGCATTGCGTCCCGACGTGTGCTCACTCGACCTCAACACGATGAACTCGGGCGCCGACGTGGTGATCAACACG CCGGGCAACGTCCGCAAGATGGCCGAGGTGATTCGCGCCGCAGGCGTGATGCCGGAGCTCGAGATCTTCGATTCAGGCGA TCTGAACATGGCGCTCGACTTCATGCGTGATGGCGTGCTTGAAGGCCCGGGGCTGTGGACTTTCGTGCTGGGCGTGAAGT ATGGCTTCGCACCCACGCCGGAAACGATCTTCTACGCCCGCAACATGCTGCCACCGGGCGCGCACTGGTCGGCGTTCGGC ATCGGCCGCGCGGAGTTCCCGATCGTCGCGCAGGCCTGGCTGGCGGGTGGCCACGTCCGAGTCGGCCTGGAAGACAACAT CTATCTCGAAAAAGGCGTGCTGGCGCCGAGCAACGCCGCGTTGGTCGCCAAGGCGCGCGACATCGTGAAGTCGCTCGGTG GCGACATCGCTTCATCCGCCGATGCGCGCCGCACGCTCGGACTGCGCGAAGTCTGA
Upstream 100 bases:
>100_bases ACACCGCTGCGGCGGATCGGCCAGGCGCAGGACGTGGCTGACGCCATCGTCGCGTGCGCCACATCGCTTCGCTTTGCCAC GGGCACCACCATCGTCGTCG
Downstream 100 bases:
>100_bases TTCCTTCTCTACTGCATGCCAATCATCATGAACACTATCCAGGTCAAACGAAAAGCCGCGAACATCGACGAACTCGATCT CACCCTGTTGGGGGTGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAGASSADSFSSQFNVSMHARKTIITCAVTGNIVKPDQHPGLPITPEQIANAALEAADAGAAVAHIHVRDPETGKPSMRL DYYADVIDRIRARNRALIINLTTGPGGRFVPDEDEPRVAAAGTTLLHPLKRVEHIAALRPDVCSLDLNTMNSGADVVINT PGNVRKMAEVIRAAGVMPELEIFDSGDLNMALDFMRDGVLEGPGLWTFVLGVKYGFAPTPETIFYARNMLPPGAHWSAFG IGRAEFPIVAQAWLAGGHVRVGLEDNIYLEKGVLAPSNAALVAKARDIVKSLGGDIASSADARRTLGLREV
Sequences:
>Translated_311_residues MAGASSADSFSSQFNVSMHARKTIITCAVTGNIVKPDQHPGLPITPEQIANAALEAADAGAAVAHIHVRDPETGKPSMRL DYYADVIDRIRARNRALIINLTTGPGGRFVPDEDEPRVAAAGTTLLHPLKRVEHIAALRPDVCSLDLNTMNSGADVVINT PGNVRKMAEVIRAAGVMPELEIFDSGDLNMALDFMRDGVLEGPGLWTFVLGVKYGFAPTPETIFYARNMLPPGAHWSAFG IGRAEFPIVAQAWLAGGHVRVGLEDNIYLEKGVLAPSNAALVAKARDIVKSLGGDIASSADARRTLGLREV >Mature_310_residues AGASSADSFSSQFNVSMHARKTIITCAVTGNIVKPDQHPGLPITPEQIANAALEAADAGAAVAHIHVRDPETGKPSMRLD YYADVIDRIRARNRALIINLTTGPGGRFVPDEDEPRVAAAGTTLLHPLKRVEHIAALRPDVCSLDLNTMNSGADVVINTP GNVRKMAEVIRAAGVMPELEIFDSGDLNMALDFMRDGVLEGPGLWTFVLGVKYGFAPTPETIFYARNMLPPGAHWSAFGI GRAEFPIVAQAWLAGGHVRVGLEDNIYLEKGVLAPSNAALVAKARDIVKSLGGDIASSADARRTLGLREV
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33119; Mature: 32988
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASSADSFSSQFNVSMHARKTIITCAVTGNIVKPDQHPGLPITPEQIANAALEAADAG CCCCCCCCCHHHHEEEEEECCEEEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHCCCC AAVAHIHVRDPETGKPSMRLDYYADVIDRIRARNRALIINLTTGPGGRFVPDEDEPRVAA CEEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEE AGTTLLHPLKRVEHIAALRPDVCSLDLNTMNSGADVVINTPGNVRKMAEVIRAAGVMPEL CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCE EIFDSGDLNMALDFMRDGVLEGPGLWTFVLGVKYGFAPTPETIFYARNMLPPGAHWSAFG EEECCCCCHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHCCCCCCCCCEEE IGRAEFPIVAQAWLAGGHVRVGLEDNIYLEKGVLAPSNAALVAKARDIVKSLGGDIASSA CCCCCCCHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHCCC DARRTLGLREV HHHHCCCCCCC >Mature Secondary Structure AGASSADSFSSQFNVSMHARKTIITCAVTGNIVKPDQHPGLPITPEQIANAALEAADAG CCCCCCCCHHHHEEEEEECCEEEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHCCCC AAVAHIHVRDPETGKPSMRLDYYADVIDRIRARNRALIINLTTGPGGRFVPDEDEPRVAA CEEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEE AGTTLLHPLKRVEHIAALRPDVCSLDLNTMNSGADVVINTPGNVRKMAEVIRAAGVMPEL CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCE EIFDSGDLNMALDFMRDGVLEGPGLWTFVLGVKYGFAPTPETIFYARNMLPPGAHWSAFG EEECCCCCHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHCCCCCCCCCEEE IGRAEFPIVAQAWLAGGHVRVGLEDNIYLEKGVLAPSNAALVAKARDIVKSLGGDIASSA CCCCCCCHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHCCC DARRTLGLREV HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA