| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is livK [C]
Identifier: 94310800
GI number: 94310800
Start: 2018338
End: 2019588
Strand: Reverse
Name: livK [C]
Synonym: Rmet_1862
Alternate gene names: 94310800
Gene position: 2019588-2018338 (Counterclockwise)
Preceding gene: 94310801
Following gene: 94310799
Centisome position: 51.41
GC content: 60.59
Gene sequence:
>1251_bases ATGACCAAGTTGCGTCCGCTGGTAACCGGGGTGGCGGCAGTTGTGGCACTGGGTTCCGCGCTGGTATCGGGAGTGGCTGC AGCCGATACGGTGAAGATCGCGTTTATCGATCCGCTTTCGGGTTTGATGGCCCCCGTGGGCCAGAACCAGCTCAAGAGCT GGCAGTACGTGGCCGACGTGGCTAACCAGAAGAACTGGGCGGGCGCGCACAAGTTCGAGGTAGTGGGGTTTGACAACAAG CTGTCGCCGCAGGAAAGCCTGACCATCCTCAAGCAGGCCGTGGACCAGAACATCCGCTATATCGTCCAGGGCAACGGCTC CGCCGTGGGGCTGGCGCTGGAAGACGCGGTGGCCAAGCACAACGAGCGCAATCCGGGCAAGGAAATCGTCTACCTGAATT ACGCCGCGGTGGACCCGGACATGACCAACAGCAAGTGCAATTACTGGCATTTCCGGCTCGACGCGAACTCCGACATGAAG ATGGAGGCGCTGACGACGTATCTGGCCAAGGACCCGAACGTCAAAAAGGTCTACCTGATCAACCAGAACTACTCGTTTGG CCACCAGGTGGCGCGCGCGGCAAAGGAATACCTGAAGCGCAAGCGTCCTGACATCCAGATCGTCGGCGAGGATCTGCACC CGCTGGCGCAGGTCAAGGACTTCGCGCCGTATGCGGCCAAGATCAAAGCGTCTGGCGCCGATACGGTGATCACCGGCAAC TGGGGTAGCGACCTTGCGCTGCTGATCAAGGCGGGCAAGGATGCCGGCCTGCCGGTCAACTACTACACGTACTACGCGGC CACCACCGGGGTGCCGACGGCGATGGGTGCCTCCGGCGCCGAGCACGTGAAGTACGTCGGCTACTACAACCCGAACAATC CCACCTTCAAGGGTGGCGACATCGTCGAAGGCTTCAAGAAGAAGTACAACGACGACTTCTATGTGATGGCGGCCTACTCG GGCGTTGCCTTCCTTGCCAAGGCCATGAAGGACACTGGTTCCACGGACCCGGTCAAGGTGGCCAAGGCGATGGAGGGCAT GAAGGTCGAGAGCATGAACGGGACGGTGGAAATGCGTAACACCGACCACCAGGCCCAGCAACCGCTGGTGGTGGCCACCT GGACCAAGGTCAACGGCAAGGACATCAAGTTTGACCAGGAAAACACCGGCTATGGCTGGAAGACCAACGCGCAGCTCGAC CAGTTCGTGGCCGCGCAGCCGACTTCCTGTCAGATGAAACGGCCGAACTAA
Upstream 100 bases:
>100_bases CGCGGGCTCAGGGAAAGGAGTCCGCGCGCCGGTGACCGGCCACGCGAGGAGGGTGTGGCCGGTCACTCATCGCCAATGAC AACAAGTGAAGGAGACAGGT
Downstream 100 bases:
>100_bases GTCGGGAAGACAAAGAGAAGGAAGGGCAGATCAGGGTTCCCGTTCGCGCGGGAACCCTGGACAATGCGGATTTTGTCGGG CCATGCTCCGGTGCCGAGGA
Product: HAAT family ABC transporter periplasmic protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTKLRPLVTGVAAVVALGSALVSGVAAADTVKIAFIDPLSGLMAPVGQNQLKSWQYVADVANQKNWAGAHKFEVVGFDNK LSPQESLTILKQAVDQNIRYIVQGNGSAVGLALEDAVAKHNERNPGKEIVYLNYAAVDPDMTNSKCNYWHFRLDANSDMK MEALTTYLAKDPNVKKVYLINQNYSFGHQVARAAKEYLKRKRPDIQIVGEDLHPLAQVKDFAPYAAKIKASGADTVITGN WGSDLALLIKAGKDAGLPVNYYTYYAATTGVPTAMGASGAEHVKYVGYYNPNNPTFKGGDIVEGFKKKYNDDFYVMAAYS GVAFLAKAMKDTGSTDPVKVAKAMEGMKVESMNGTVEMRNTDHQAQQPLVVATWTKVNGKDIKFDQENTGYGWKTNAQLD QFVAAQPTSCQMKRPN
Sequences:
>Translated_416_residues MTKLRPLVTGVAAVVALGSALVSGVAAADTVKIAFIDPLSGLMAPVGQNQLKSWQYVADVANQKNWAGAHKFEVVGFDNK LSPQESLTILKQAVDQNIRYIVQGNGSAVGLALEDAVAKHNERNPGKEIVYLNYAAVDPDMTNSKCNYWHFRLDANSDMK MEALTTYLAKDPNVKKVYLINQNYSFGHQVARAAKEYLKRKRPDIQIVGEDLHPLAQVKDFAPYAAKIKASGADTVITGN WGSDLALLIKAGKDAGLPVNYYTYYAATTGVPTAMGASGAEHVKYVGYYNPNNPTFKGGDIVEGFKKKYNDDFYVMAAYS GVAFLAKAMKDTGSTDPVKVAKAMEGMKVESMNGTVEMRNTDHQAQQPLVVATWTKVNGKDIKFDQENTGYGWKTNAQLD QFVAAQPTSCQMKRPN >Mature_415_residues TKLRPLVTGVAAVVALGSALVSGVAAADTVKIAFIDPLSGLMAPVGQNQLKSWQYVADVANQKNWAGAHKFEVVGFDNKL SPQESLTILKQAVDQNIRYIVQGNGSAVGLALEDAVAKHNERNPGKEIVYLNYAAVDPDMTNSKCNYWHFRLDANSDMKM EALTTYLAKDPNVKKVYLINQNYSFGHQVARAAKEYLKRKRPDIQIVGEDLHPLAQVKDFAPYAAKIKASGADTVITGNW GSDLALLIKAGKDAGLPVNYYTYYAATTGVPTAMGASGAEHVKYVGYYNPNNPTFKGGDIVEGFKKKYNDDFYVMAAYSG VAFLAKAMKDTGSTDPVKVAKAMEGMKVESMNGTVEMRNTDHQAQQPLVVATWTKVNGKDIKFDQENTGYGWKTNAQLDQ FVAAQPTSCQMKRPN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=342, Percent_Identity=21.3450292397661, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI48994941, Length=352, Percent_Identity=21.5909090909091, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45373; Mature: 45242
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLRPLVTGVAAVVALGSALVSGVAAADTVKIAFIDPLSGLMAPVGQNQLKSWQYVADV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHCCCCHHHHHHHHHHHHH ANQKNWAGAHKFEVVGFDNKLSPQESLTILKQAVDQNIRYIVQGNGSAVGLALEDAVAKH HCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHHHHC NERNPGKEIVYLNYAAVDPDMTNSKCNYWHFRLDANSDMKMEALTTYLAKDPNVKKVYLI CCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEE NQNYSFGHQVARAAKEYLKRKRPDIQIVGEDLHPLAQVKDFAPYAAKIKASGADTVITGN ECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCEEEECC WGSDLALLIKAGKDAGLPVNYYTYYAATTGVPTAMGASGAEHVKYVGYYNPNNPTFKGGD CCCCEEEEEECCCCCCCCEEEEEEEEECCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCH IVEGFKKKYNDDFYVMAAYSGVAFLAKAMKDTGSTDPVKVAKAMEGMKVESMNGTVEMRN HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCEEEECC TDHQAQQPLVVATWTKVNGKDIKFDQENTGYGWKTNAQLDQFVAAQPTSCQMKRPN CCHHHHCCEEEEEEEECCCCEEEECCCCCCCCEECCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TKLRPLVTGVAAVVALGSALVSGVAAADTVKIAFIDPLSGLMAPVGQNQLKSWQYVADV CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHCCCCHHHHHHHHHHHHH ANQKNWAGAHKFEVVGFDNKLSPQESLTILKQAVDQNIRYIVQGNGSAVGLALEDAVAKH HCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHHHHC NERNPGKEIVYLNYAAVDPDMTNSKCNYWHFRLDANSDMKMEALTTYLAKDPNVKKVYLI CCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEE NQNYSFGHQVARAAKEYLKRKRPDIQIVGEDLHPLAQVKDFAPYAAKIKASGADTVITGN ECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCEEEECC WGSDLALLIKAGKDAGLPVNYYTYYAATTGVPTAMGASGAEHVKYVGYYNPNNPTFKGGD CCCCEEEEEECCCCCCCCEEEEEEEEECCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCH IVEGFKKKYNDDFYVMAAYSGVAFLAKAMKDTGSTDPVKVAKAMEGMKVESMNGTVEMRN HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCEEEECC TDHQAQQPLVVATWTKVNGKDIKFDQENTGYGWKTNAQLDQFVAAQPTSCQMKRPN CCHHHHCCEEEEEEEECCCCEEEECCCCCCCCEECCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA