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The map label for this gene is ygbL [H]

Identifier: 94310775

GI number: 94310775

Start: 1991619

End: 1992257

Strand: Direct

Name: ygbL [H]

Synonym: Rmet_1837

Alternate gene names: 94310775

Gene position: 1991619-1992257 (Clockwise)

Preceding gene: 94310774

Following gene: 335055550

Centisome position: 50.7

GC content: 65.57

Gene sequence:

>639_bases
ATGAGCAACGAGAGCGCATTGCGCGAAGAGATCTGCCGCGTCGGCGCCAGCCTGTTCCAGCGTGGCTACACGGTGGGCAC
GGCGGGCAATATCAGCGCACGGCTCGACGACGGCTGGCTGATTACGCCCACTGACGCCTGCCTGGGCACGCTCGATCCGG
CCAGGGTCGCCAAGGTGTCGCCCGATGGCGGCTGGGTGTCGGGCGACAAGCCGTCGAAGACGTTGACGCTGCACCGTTGC
GTCTACGACAACAACCCGAACGCGCACGGCGTGGTGCATACGCATTCCACGCATCTGGTGGCCCTGACGCTGGCCGGTGT
CTGGCATCCGGACGACGTACTGCCCCCGATCACGCCGTACTACGTGATGAAGGTCGGCCATATCCCGCTGATTCCGTATC
ACCGCCCCGGCGACCCGGCGGTAGCCGCGCGCGTGGCCCAACTGGCCAATGAGGTGCGCGGTGTGCTGCTGGCACGGCTA
GGGCCGGTGGTGTGGGAAGACAGTGTGTCACGCGCTGCCTATGCGCTCGAAGAGCTCGAAGAAACGGCGAAGCTTTGGAT
GATGCTCGGCGAAAAACCTGCCCCGCTGGACGAGGCCGCGCTGACGGAACTGCGCGATACGTTCAAGTCGAGGTGGTGA

Upstream 100 bases:

>100_bases
TCACGCTGGACGATGCGCCGCTGGGACTGGCACTGAAATCCGGCAACTTCGGCGGCGAGAACTTCTTCGATGAAGCGCTG
CAAGCGCTGGGAGCACCGCA

Downstream 100 bases:

>100_bases
CACACGACTGATTTGTTTTTCCCCTTTCCCGCACAGTGGGAGAGGGGCCGGGGAGAGAGACAGCGCACCCCCAGGGCAAC
TCCGCAAAACAAAGCCCCTG

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSNESALREEICRVGASLFQRGYTVGTAGNISARLDDGWLITPTDACLGTLDPARVAKVSPDGGWVSGDKPSKTLTLHRC
VYDNNPNAHGVVHTHSTHLVALTLAGVWHPDDVLPPITPYYVMKVGHIPLIPYHRPGDPAVAARVAQLANEVRGVLLARL
GPVVWEDSVSRAAYALEELEETAKLWMMLGEKPAPLDEAALTELRDTFKSRW

Sequences:

>Translated_212_residues
MSNESALREEICRVGASLFQRGYTVGTAGNISARLDDGWLITPTDACLGTLDPARVAKVSPDGGWVSGDKPSKTLTLHRC
VYDNNPNAHGVVHTHSTHLVALTLAGVWHPDDVLPPITPYYVMKVGHIPLIPYHRPGDPAVAARVAQLANEVRGVLLARL
GPVVWEDSVSRAAYALEELEETAKLWMMLGEKPAPLDEAALTELRDTFKSRW
>Mature_211_residues
SNESALREEICRVGASLFQRGYTVGTAGNISARLDDGWLITPTDACLGTLDPARVAKVSPDGGWVSGDKPSKTLTLHRCV
YDNNPNAHGVVHTHSTHLVALTLAGVWHPDDVLPPITPYYVMKVGHIPLIPYHRPGDPAVAARVAQLANEVRGVLLARLG
PVVWEDSVSRAAYALEELEETAKLWMMLGEKPAPLDEAALTELRDTFKSRW

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=204, Percent_Identity=50, Blast_Score=202, Evalue=1e-53,
Organism=Escherichia coli, GI1789164, Length=185, Percent_Identity=28.1081081081081, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23107; Mature: 22975

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNESALREEICRVGASLFQRGYTVGTAGNISARLDDGWLITPTDACLGTLDPARVAKVS
CCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCEEECCHHHHHCCCCHHHEEEEC
PDGGWVSGDKPSKTLTLHRCVYDNNPNAHGVVHTHSTHLVALTLAGVWHPDDVLPPITPY
CCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCHH
YVMKVGHIPLIPYHRPGDPAVAARVAQLANEVRGVLLARLGPVVWEDSVSRAAYALEELE
HHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ETAKLWMMLGEKPAPLDEAALTELRDTFKSRW
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNESALREEICRVGASLFQRGYTVGTAGNISARLDDGWLITPTDACLGTLDPARVAKVS
CCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCEEECCHHHHHCCCCHHHEEEEC
PDGGWVSGDKPSKTLTLHRCVYDNNPNAHGVVHTHSTHLVALTLAGVWHPDDVLPPITPY
CCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCHH
YVMKVGHIPLIPYHRPGDPAVAARVAQLANEVRGVLLARLGPVVWEDSVSRAAYALEELE
HHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ETAKLWMMLGEKPAPLDEAALTELRDTFKSRW
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]