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The map label for this gene is ygbK [C]

Identifier: 94310774

GI number: 94310774

Start: 1990354

End: 1991622

Strand: Direct

Name: ygbK [C]

Synonym: Rmet_1836

Alternate gene names: 94310774

Gene position: 1990354-1991622 (Clockwise)

Preceding gene: 94310773

Following gene: 94310775

Centisome position: 50.67

GC content: 68.09

Gene sequence:

>1269_bases
ATGAATCGTCCTCTGCTCGGCTGTATCGCCGACGATTTCACCGGCGCCACGGATCTGGCCAACACGCTAGTCCGCAATGG
CATGCGGACCGTGCAGACGATCGGCGTGCCGGCGTCCGCCGTGGAAGCCGATGCCATCGTCGTGGCACTGAAATCGCGCA
CGATCCCGGCCAGCAACGCGGTGGCGCAGTCGCTCGCCGCACTGCGCTGGCTGCGCGAACAAGGCTGCCGCCAGTTCGTG
TTCAAGTACTGCTCGACGTTCGACTCCACCGACGCCGGCAATATCGGCCCCGTGGCCGAAGCCCTGCTCGACGCGCTCGG
CAGCGACTTTACGATTGCCTGCCCGGCCTTTCCGGAGAACGGCCGCACGATCTTCCGCGGCCATCTGTTCGTGGCGGACG
CGCTGCTCAACGAATCGGGCATGGAGCACCATCCGCTTACGCCGATGACCGACGCCAACCTCGTGCGGGTGTTGCAGGGC
CAGAGCCAGGCCAAGGTCGGTCTGTTGCGCTACGACACCGTCGCGCAGGGCGCAAATGCCGTGCGCGCGCGCATTGACGC
GTTGCGTGGCGAGGGCGTGAAGCTGGCGATCGCCGATGCCATTTCCGATACCGACCTGTTCGCGCTGGGCGAAGGTTGCG
CCGCGCTGCCGCTGATCACGGGCGGCTCGGGCATCGCGCTGGGCCTGCCCGAGAACTTCCGTCGCGCCGGACTGCTACCT
GCGCGCACCGACGCCGCAGAAGTCCCGCCCGTGCATGGTCATGGCGTGGTGCTGGCGGGCAGCGCATCGCGTGCCACGAA
CGGCCAGGTGGCGCACTGGATCGCGCAGAAGCGCCCCGCCCTGCGGATCGATCCTCTGCGTCTGGCGCGTGGAGACACGG
TCGTGGAGAACGCACTGGCCTTCGCGGGCAATCACGACGAGCCGGTGCTGATCTATGCCACCGCCCAACCCGATGAAGTC
AAGGCCGTGCAGGCCGAACTCGGCGTCGCACGCGCGGGCGAGTTGGTCGAGCACGCGCTGGCGAGCATCGCCGCCAGCCT
CAAGGCACGCGGCACGCGGCGCTTCGTGGTGGCCGGCGGCGAAACCTCCGGTTCCGTGGTGCAGGCGCTGGGCGTGCAGT
CGTTGCGTATCGGTCCGCAGATCGCGCCAGGCGTGCCGGCGACGGTCACGCTGGACGATGCGCCGCTGGGACTGGCACTG
AAATCCGGCAACTTCGGCGGCGAGAACTTCTTCGATGAAGCGCTGCAAGCGCTGGGAGCACCGCAATGA

Upstream 100 bases:

>100_bases
GGGCACGGCGGCGAAGACGATTCGGCCGTGATCAAGATCTTCCCGGGCATCGACCTGCCCGGCCCGAAGGCCAGGTAACC
CAAGGCAAAGGAGTCAGACG

Downstream 100 bases:

>100_bases
GCAACGAGAGCGCATTGCGCGAAGAGATCTGCCGCGTCGGCGCCAGCCTGTTCCAGCGTGGCTACACGGTGGGCACGGCG
GGCAATATCAGCGCACGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNRPLLGCIADDFTGATDLANTLVRNGMRTVQTIGVPASAVEADAIVVALKSRTIPASNAVAQSLAALRWLREQGCRQFV
FKYCSTFDSTDAGNIGPVAEALLDALGSDFTIACPAFPENGRTIFRGHLFVADALLNESGMEHHPLTPMTDANLVRVLQG
QSQAKVGLLRYDTVAQGANAVRARIDALRGEGVKLAIADAISDTDLFALGEGCAALPLITGGSGIALGLPENFRRAGLLP
ARTDAAEVPPVHGHGVVLAGSASRATNGQVAHWIAQKRPALRIDPLRLARGDTVVENALAFAGNHDEPVLIYATAQPDEV
KAVQAELGVARAGELVEHALASIAASLKARGTRRFVVAGGETSGSVVQALGVQSLRIGPQIAPGVPATVTLDDAPLGLAL
KSGNFGGENFFDEALQALGAPQ

Sequences:

>Translated_422_residues
MNRPLLGCIADDFTGATDLANTLVRNGMRTVQTIGVPASAVEADAIVVALKSRTIPASNAVAQSLAALRWLREQGCRQFV
FKYCSTFDSTDAGNIGPVAEALLDALGSDFTIACPAFPENGRTIFRGHLFVADALLNESGMEHHPLTPMTDANLVRVLQG
QSQAKVGLLRYDTVAQGANAVRARIDALRGEGVKLAIADAISDTDLFALGEGCAALPLITGGSGIALGLPENFRRAGLLP
ARTDAAEVPPVHGHGVVLAGSASRATNGQVAHWIAQKRPALRIDPLRLARGDTVVENALAFAGNHDEPVLIYATAQPDEV
KAVQAELGVARAGELVEHALASIAASLKARGTRRFVVAGGETSGSVVQALGVQSLRIGPQIAPGVPATVTLDDAPLGLAL
KSGNFGGENFFDEALQALGAPQ
>Mature_422_residues
MNRPLLGCIADDFTGATDLANTLVRNGMRTVQTIGVPASAVEADAIVVALKSRTIPASNAVAQSLAALRWLREQGCRQFV
FKYCSTFDSTDAGNIGPVAEALLDALGSDFTIACPAFPENGRTIFRGHLFVADALLNESGMEHHPLTPMTDANLVRVLQG
QSQAKVGLLRYDTVAQGANAVRARIDALRGEGVKLAIADAISDTDLFALGEGCAALPLITGGSGIALGLPENFRRAGLLP
ARTDAAEVPPVHGHGVVLAGSASRATNGQVAHWIAQKRPALRIDPLRLARGDTVVENALAFAGNHDEPVLIYATAQPDEV
KAVQAELGVARAGELVEHALASIAASLKARGTRRFVVAGGETSGSVVQALGVQSLRIGPQIAPGVPATVTLDDAPLGLAL
KSGNFGGENFFDEALQALGAPQ

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=389, Percent_Identity=46.7866323907455, Blast_Score=330, Evalue=9e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 43757; Mature: 43757

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPLLGCIADDFTGATDLANTLVRNGMRTVQTIGVPASAVEADAIVVALKSRTIPASNA
CCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHCCCEEEEEEECCCCCCHHH
VAQSLAALRWLREQGCRQFVFKYCSTFDSTDAGNIGPVAEALLDALGSDFTIACPAFPEN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCC
GRTIFRGHLFVADALLNESGMEHHPLTPMTDANLVRVLQGQSQAKVGLLRYDTVAQGANA
CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHHHHCCHHH
VRARIDALRGEGVKLAIADAISDTDLFALGEGCAALPLITGGSGIALGLPENFRRAGLLP
HHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCEEEECCCHHHHHCCCCC
ARTDAAEVPPVHGHGVVLAGSASRATNGQVAHWIAQKRPALRIDPLRLARGDTVVENALA
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEECCHHHCCCCHHHHHHHH
FAGNHDEPVLIYATAQPDEVKAVQAELGVARAGELVEHALASIAASLKARGTRRFVVAGG
HCCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
ETSGSVVQALGVQSLRIGPQIAPGVPATVTLDDAPLGLALKSGNFGGENFFDEALQALGA
CCCCHHHHHHCCHHEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCC
PQ
CC
>Mature Secondary Structure
MNRPLLGCIADDFTGATDLANTLVRNGMRTVQTIGVPASAVEADAIVVALKSRTIPASNA
CCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHCCCEEEEEEECCCCCCHHH
VAQSLAALRWLREQGCRQFVFKYCSTFDSTDAGNIGPVAEALLDALGSDFTIACPAFPEN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCC
GRTIFRGHLFVADALLNESGMEHHPLTPMTDANLVRVLQGQSQAKVGLLRYDTVAQGANA
CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHHHHCCHHH
VRARIDALRGEGVKLAIADAISDTDLFALGEGCAALPLITGGSGIALGLPENFRRAGLLP
HHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCEEEECCCHHHHHCCCCC
ARTDAAEVPPVHGHGVVLAGSASRATNGQVAHWIAQKRPALRIDPLRLARGDTVVENALA
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEECCHHHCCCCHHHHHHHH
FAGNHDEPVLIYATAQPDEVKAVQAELGVARAGELVEHALASIAASLKARGTRRFVVAGG
HCCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
ETSGSVVQALGVQSLRIGPQIAPGVPATVTLDDAPLGLALKSGNFGGENFFDEALQALGA
CCCCHHHHHHCCHHEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCC
PQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]