| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yoaE [H]
Identifier: 94310700
GI number: 94310700
Start: 1913194
End: 1914786
Strand: Reverse
Name: yoaE [H]
Synonym: Rmet_1762
Alternate gene names: 94310700
Gene position: 1914786-1913194 (Counterclockwise)
Preceding gene: 94310703
Following gene: 94310698
Centisome position: 48.75
GC content: 63.59
Gene sequence:
>1593_bases ATGGAATGGTTGACCGACCCCTCGATCTGGATCGGACTGGTCACGCTGGTCGTGCTCGAGATCGTCCTCGGCATCGACAA CCTTATCTTCGTGGCGATTCTCGCGGACAAACTGCCGCCGAGCCAGCGCGACAAGGCGCGGGTGGTTGGCCTGTCGCTGG CGATGTTCATGCGGCTTGGCTTGCTGTCGGTGATGTCGTGGCTCATCACGCTCACCCGGCCGCTGTTCTCCATTGGGCCG CTCTCGATGTCGGCCCGGGACCTGATCCTGGCGGTAGGCGGCTTCTTCCTGTTGCTCAAGGCCACGCTCGAGCTTCATGA GCGCCTGGAGGGCATGCCACATATGGAGGGGGGCAAGACCGAGTACGCCGGCTTCTGGGTGGTAGTGACCCAGATCGTGA TTCTCGACGCGGTGTTCTCGCTGGACGCCGTGATCACTGCGGTGGGGGTGGCCGACCATCTCGGCGTGATGATGGCCGCC GTCGTGATCGCGGTCGGCGTCATGCTGATTGCTTCCAAGCCGCTGACCCGATTCGTGAATGCGCACCCGACGGTGGTGGT GCTGTGTCTCAGCTTCCTGCTGATGATCGGCATGAGCCTGGTGGCGGAGGGGCTCGGCTTCCATATTCCGAAGGGCTACC TGTATTCGGCGATCGGATTCTCGGTGCTGATCGAGGCATTCAACCAGGTCGCGCAGCGCAACTTTCTGCGTCATATGGCG CGGGTGCCGATGCGGCAGAGGACAGCCGATGCCGTATTGCGCCTGCTCGGCGACCGGCGCGCCAATGCATCGGAGACGCC AGAAGGCGGGGCCGTGAAGCGGGATGAACCGCTGCCGTTCGCGCCGGAAGAGCGCAGCATGGTGAGTGGCGTGATGACCC TGGCCGAACGATCCGTCCACTCCCTGATGACGCCGCGCGCCGATATCTCATATCTGGACGTGAACGCCGATGGCGGAACG CTGCGCAAACAGATTCTTGATGACCCGCACAGTTTCTTCCCGGTATGCCGCGGCGAACTGGACAACGTGATTGGCGTCGT GCGCGGCAAGGATGCGCTCGGAGACCTGTTCGACAAGGGCGCCATCGACGAGACACAGAGCCTGCGCGAGCCGATCGTGG TCCACGAGTCGATCAATATCCTGCGTTTGATCGATACGCTGAAGGACTCGCATTCGCGCGGCCGTCTGGTGCTGGTGGCG GACGAGTATGGCGCGATCGTTGGGCTGGTGACACCGATCGACATCCTCGAAGCCATTGCGGGAGAGTTTCCCGACGAGGA CGAGACCGCCACGATCACGAAGATCGACGAAGGGCACTGGCTCATGGATGGCGCTGCGGATCTGCACGGCGTGGCGCAGG CGCTCGGCCTGGACCCCGCCTGGGTGAGTTCGGCGAAAGGCGCCGCATCGCTGGGTGGCTTGCTGCTCGAACACTTCGGC ATGGTGCCGAAACCACGGATGACGCTCGATCTGGAGGGCTATCGTTTCACGGTCACGGAGGTGAGCGATCGCCGGATCGA GCGCGTCGACGTTCAGGCCGTGGGAAGGGCTACCGCCGATGCCGAGGGCGCGCCCATTGACTCGGGTGCCTGA
Upstream 100 bases:
>100_bases GGTCAAGTCGCCCGAGAGTCAACGTGGGCTCACGGCTGCCGTGCTGTGGCAGCCTGTCATTTCCGGCTACAGTGCACGTT TCCCCACGTGAAATCCTGTC
Downstream 100 bases:
>100_bases GCGCACCTGCCGGATACCGCCGGCGGCACGGTTGGCGCCCTTAGTTCAGCGTTGCCCTGCGGCTTTCGGTGGCGCGCAGC AGCGCACGGCATCAATGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MEWLTDPSIWIGLVTLVVLEIVLGIDNLIFVAILADKLPPSQRDKARVVGLSLAMFMRLGLLSVMSWLITLTRPLFSIGP LSMSARDLILAVGGFFLLLKATLELHERLEGMPHMEGGKTEYAGFWVVVTQIVILDAVFSLDAVITAVGVADHLGVMMAA VVIAVGVMLIASKPLTRFVNAHPTVVVLCLSFLLMIGMSLVAEGLGFHIPKGYLYSAIGFSVLIEAFNQVAQRNFLRHMA RVPMRQRTADAVLRLLGDRRANASETPEGGAVKRDEPLPFAPEERSMVSGVMTLAERSVHSLMTPRADISYLDVNADGGT LRKQILDDPHSFFPVCRGELDNVIGVVRGKDALGDLFDKGAIDETQSLREPIVVHESINILRLIDTLKDSHSRGRLVLVA DEYGAIVGLVTPIDILEAIAGEFPDEDETATITKIDEGHWLMDGAADLHGVAQALGLDPAWVSSAKGAASLGGLLLEHFG MVPKPRMTLDLEGYRFTVTEVSDRRIERVDVQAVGRATADAEGAPIDSGA
Sequences:
>Translated_530_residues MEWLTDPSIWIGLVTLVVLEIVLGIDNLIFVAILADKLPPSQRDKARVVGLSLAMFMRLGLLSVMSWLITLTRPLFSIGP LSMSARDLILAVGGFFLLLKATLELHERLEGMPHMEGGKTEYAGFWVVVTQIVILDAVFSLDAVITAVGVADHLGVMMAA VVIAVGVMLIASKPLTRFVNAHPTVVVLCLSFLLMIGMSLVAEGLGFHIPKGYLYSAIGFSVLIEAFNQVAQRNFLRHMA RVPMRQRTADAVLRLLGDRRANASETPEGGAVKRDEPLPFAPEERSMVSGVMTLAERSVHSLMTPRADISYLDVNADGGT LRKQILDDPHSFFPVCRGELDNVIGVVRGKDALGDLFDKGAIDETQSLREPIVVHESINILRLIDTLKDSHSRGRLVLVA DEYGAIVGLVTPIDILEAIAGEFPDEDETATITKIDEGHWLMDGAADLHGVAQALGLDPAWVSSAKGAASLGGLLLEHFG MVPKPRMTLDLEGYRFTVTEVSDRRIERVDVQAVGRATADAEGAPIDSGA >Mature_530_residues MEWLTDPSIWIGLVTLVVLEIVLGIDNLIFVAILADKLPPSQRDKARVVGLSLAMFMRLGLLSVMSWLITLTRPLFSIGP LSMSARDLILAVGGFFLLLKATLELHERLEGMPHMEGGKTEYAGFWVVVTQIVILDAVFSLDAVITAVGVADHLGVMMAA VVIAVGVMLIASKPLTRFVNAHPTVVVLCLSFLLMIGMSLVAEGLGFHIPKGYLYSAIGFSVLIEAFNQVAQRNFLRHMA RVPMRQRTADAVLRLLGDRRANASETPEGGAVKRDEPLPFAPEERSMVSGVMTLAERSVHSLMTPRADISYLDVNADGGT LRKQILDDPHSFFPVCRGELDNVIGVVRGKDALGDLFDKGAIDETQSLREPIVVHESINILRLIDTLKDSHSRGRLVLVA DEYGAIVGLVTPIDILEAIAGEFPDEDETATITKIDEGHWLMDGAADLHGVAQALGLDPAWVSSAKGAASLGGLLLEHFG MVPKPRMTLDLEGYRFTVTEVSDRRIERVDVQAVGRATADAEGAPIDSGA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=519, Percent_Identity=57.0327552986513, Blast_Score=562, Evalue=1e-161, Organism=Escherichia coli, GI87082033, Length=519, Percent_Identity=47.3988439306358, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1789197, Length=232, Percent_Identity=51.2931034482759, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1790664, Length=246, Percent_Identity=25.2032520325203, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1786879, Length=232, Percent_Identity=30.6034482758621, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI145693175, Length=276, Percent_Identity=25.3623188405797, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 57347; Mature: 57347
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWLTDPSIWIGLVTLVVLEIVLGIDNLIFVAILADKLPPSQRDKARVVGLSLAMFMRLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LLSVMSWLITLTRPLFSIGPLSMSARDLILAVGGFFLLLKATLELHERLEGMPHMEGGKT HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EYAGFWVVVTQIVILDAVFSLDAVITAVGVADHLGVMMAAVVIAVGVMLIASKPLTRFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC AHPTVVVLCLSFLLMIGMSLVAEGLGFHIPKGYLYSAIGFSVLIEAFNQVAQRNFLRHMA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVPMRQRTADAVLRLLGDRRANASETPEGGAVKRDEPLPFAPEERSMVSGVMTLAERSVH HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SLMTPRADISYLDVNADGGTLRKQILDDPHSFFPVCRGELDNVIGVVRGKDALGDLFDKG HHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AIDETQSLREPIVVHESINILRLIDTLKDSHSRGRLVLVADEYGAIVGLVTPIDILEAIA CCCHHHHHHCCEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH GEFPDEDETATITKIDEGHWLMDGAADLHGVAQALGLDPAWVSSAKGAASLGGLLLEHFG CCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCC MVPKPRMTLDLEGYRFTVTEVSDRRIERVDVQAVGRATADAEGAPIDSGA CCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MEWLTDPSIWIGLVTLVVLEIVLGIDNLIFVAILADKLPPSQRDKARVVGLSLAMFMRLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LLSVMSWLITLTRPLFSIGPLSMSARDLILAVGGFFLLLKATLELHERLEGMPHMEGGKT HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EYAGFWVVVTQIVILDAVFSLDAVITAVGVADHLGVMMAAVVIAVGVMLIASKPLTRFVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC AHPTVVVLCLSFLLMIGMSLVAEGLGFHIPKGYLYSAIGFSVLIEAFNQVAQRNFLRHMA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVPMRQRTADAVLRLLGDRRANASETPEGGAVKRDEPLPFAPEERSMVSGVMTLAERSVH HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SLMTPRADISYLDVNADGGTLRKQILDDPHSFFPVCRGELDNVIGVVRGKDALGDLFDKG HHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AIDETQSLREPIVVHESINILRLIDTLKDSHSRGRLVLVADEYGAIVGLVTPIDILEAIA CCCHHHHHHCCEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH GEFPDEDETATITKIDEGHWLMDGAADLHGVAQALGLDPAWVSSAKGAASLGGLLLEHFG CCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCC MVPKPRMTLDLEGYRFTVTEVSDRRIERVDVQAVGRATADAEGAPIDSGA CCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]