| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94310685
Identifier: 94310685
GI number: 94310685
Start: 1894006
End: 1894539
Strand: Reverse
Name: 94310685
Synonym: Rmet_1747
Alternate gene names: NA
Gene position: 1894539-1894006 (Counterclockwise)
Preceding gene: 94310686
Following gene: 94310683
Centisome position: 48.23
GC content: 55.24
Gene sequence:
>534_bases ATGGATCAAGAAACGAACATAGTCGCCTGTAGCGATACGGCTGCCTTGCATATGGTTTGCGGGAAGATCGCTTCGGGTAA ATCCTCACTGACGGCACGCTTGGCCGCCGCCCCTCGGAGAGTTCTGCTGAGCGAGGACAAATGGATAGCATGTCTCTACC CGGACGAAATCCATACGCTATCCGATTACATGAACCGCACAGCGCGCATAAGAACACTTCTTACCGACCACATCGTGTCG CTGCTCACGGCGGGTACATCCGTAGTTCTGGACTTCCCATTCAATACCGTCGGTGCTCGGACGTGGGGCGCCTCACTATA CCGAGCGGCCGGCTGCGAGCATCGACTCCATTATCTGGAGGTGAGCGACGAGATCTGCAAAAGCCGCTTAAAGGCCAGGA ACCTGTCAGGCGAGCATCCTTTCCAGACATCAGAAGAGCAGTTCGATCAGATAACCAGCTATTTCGTGCCCCCGGCGCAC GGCGAAGGTTTCAATCTGATCACCTATGACGAGACTGGGAAGGTCCGTTACTAG
Upstream 100 bases:
>100_bases GCGAATCTCGGCGGGATAGCTATTGAGTTGACAATACGCAATCACAACCCGCCCAGAAGGCGGGTTTTTTGCTTTCTGGG GCGACACGGAGCGCTTGGAA
Downstream 100 bases:
>100_bases GCGGACTCACGACGTTCGAGTGCCCGGTTAGAGGGGAGTGTGCGGTTCGCTCCTGGCCTTCGGCCGTGCTCGCCAGGGCG AGCCCCTGGCGCTTGTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MDQETNIVACSDTAALHMVCGKIASGKSSLTARLAAAPRRVLLSEDKWIACLYPDEIHTLSDYMNRTARIRTLLTDHIVS LLTAGTSVVLDFPFNTVGARTWGASLYRAAGCEHRLHYLEVSDEICKSRLKARNLSGEHPFQTSEEQFDQITSYFVPPAH GEGFNLITYDETGKVRY
Sequences:
>Translated_177_residues MDQETNIVACSDTAALHMVCGKIASGKSSLTARLAAAPRRVLLSEDKWIACLYPDEIHTLSDYMNRTARIRTLLTDHIVS LLTAGTSVVLDFPFNTVGARTWGASLYRAAGCEHRLHYLEVSDEICKSRLKARNLSGEHPFQTSEEQFDQITSYFVPPAH GEGFNLITYDETGKVRY >Mature_177_residues MDQETNIVACSDTAALHMVCGKIASGKSSLTARLAAAPRRVLLSEDKWIACLYPDEIHTLSDYMNRTARIRTLLTDHIVS LLTAGTSVVLDFPFNTVGARTWGASLYRAAGCEHRLHYLEVSDEICKSRLKARNLSGEHPFQTSEEQFDQITSYFVPPAH GEGFNLITYDETGKVRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19727; Mature: 19727
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQETNIVACSDTAALHMVCGKIASGKSSLTARLAAAPRRVLLSEDKWIACLYPDEIHTL CCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCHHEEECCCCEEEEECCHHHHHH SDYMNRTARIRTLLTDHIVSLLTAGTSVVLDFPFNTVGARTWGASLYRAAGCEHRLHYLE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEEE VSDEICKSRLKARNLSGEHPFQTSEEQFDQITSYFVPPAHGEGFNLITYDETGKVRY CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MDQETNIVACSDTAALHMVCGKIASGKSSLTARLAAAPRRVLLSEDKWIACLYPDEIHTL CCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCHHEEECCCCEEEEECCHHHHHH SDYMNRTARIRTLLTDHIVSLLTAGTSVVLDFPFNTVGARTWGASLYRAAGCEHRLHYLE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEEE VSDEICKSRLKARNLSGEHPFQTSEEQFDQITSYFVPPAHGEGFNLITYDETGKVRY CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA