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The map label for this gene is tcp [H]

Identifier: 94310633

GI number: 94310633

Start: 1833452

End: 1834675

Strand: Reverse

Name: tcp [H]

Synonym: Rmet_1693

Alternate gene names: 94310633

Gene position: 1834675-1833452 (Counterclockwise)

Preceding gene: 94310634

Following gene: 94310632

Centisome position: 46.71

GC content: 58.74

Gene sequence:

>1224_bases
ATGAAGAATATTCTTATCGGCATCAAATCCAGGCTTATAGCGGGGTTCGCATTGTTTGCATTACTGCTGACCGGCGTTGG
CGCATTTGGCTATTACGGTCTGTCCACGCTTGGTGAGCGCATCGAGGCACTCTATGCGTCCAATACCACACCACTTGTTC
GCGTGGCTTCGGTCAGGGCGCACTCCTTGCGCATACGTATGAATCTCTGGCGTGCACAGGTCGAAGCTTCGCCGCAAGCC
ACCGCACAGGCAGAGAAGGACATCGCCGCGTCACGCGCCGCCATCGAAGATGCTTGGGCGCGCTACTACCCGGACGGCAT
CACCTCGCCCAGCGAACGAGAACTTGCCACGCAGATCAATGCTGCACTGAAGCAACTCCTCCCGGAGAACGACAAGGTGC
TGGCCCTGCTTCGTGCGGAAGACTATGTTGCGGCCAAGGAATATCAGGACGCCAACGTCGCCGTGCAAGCTGACCGCCTG
AACGAGTTGATCGACAAGGCCATAAACGACAACGCCGCGCAGGCGGAAGCGGCCGTGAAGGAAAGCTCGGGCATGACGAA
GACGATCCTGGTGATGGCCGCTTTGCTGATGGCCGCTGGCATCCTGTTGTCGCTGGTAATCGCCACCTTGCTGACGCGTG
GGGTAACAAAGCCGCCCGACAAGGCATTGAATAATGCCGCCGATGTCTCCAAAGGAAAGCTCGGCCAGCCTATCGTCGTT
GATACCCAGGACGAGATTGGTCGCGCTATTGACGCCTTGAAGTTGATGGATGAAAGGCTCTCCGCCACCGTGGAGGAAGG
GTCGCGCCAGGCTGGCGACGTGGGCGCATCCATGCAGGAAGTCATCAGCGTGATCAACAGGATGTCGGACATTATTGGAG
AGATCGCCGCCACGTCCGATAAGCGAAGCCGTGGGGGTGAACAAATACACGTCGCCATCAACCAGATTGACGCAGCCGCG
CAGCACAACGCCGCGTTGGTCGAAGAGGCTGCGGCCGCCTCTCAGTCTCTTCAGGAACAGGCGCGGCGAATGAAGGAGGA
CATGATGTTCTTCCGTCTCGCGAACGGTACCGGCGCCGTCACCGTGCCTCGCGCCTCCGTGCCAAAAGCCGTTGCGCCCA
TCGTCAAGAAGGTTGCGAAAACCAAGGTGATGAACCCATCCAGCCAGTTTGCGCTGGCCACTCTGGAAGGCAAGTCAGGT
CACGACGACTGGCAAACCTTCTGA

Upstream 100 bases:

>100_bases
CATCCTTGGACCTCGCTGGATTTCCTGGTCTTATTTCGCATCATTGGGTGTGGGTATATTCCATACAAATGCAAGCGAAA
GAAGATTCGTTTTTCATAAA

Downstream 100 bases:

>100_bases
TCTCACGCATGAGGGAGTCTCCTCTGCGGGTCCAAAGCAATAAAGCCGGGGGTGGCGTCAAGCACACGCCACCACCCAGG
TGTCCGCCACCGCCTCTCGC

Product: chemotaxis sensory transducer precursor

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKNILIGIKSRLIAGFALFALLLTGVGAFGYYGLSTLGERIEALYASNTTPLVRVASVRAHSLRIRMNLWRAQVEASPQA
TAQAEKDIAASRAAIEDAWARYYPDGITSPSERELATQINAALKQLLPENDKVLALLRAEDYVAAKEYQDANVAVQADRL
NELIDKAINDNAAQAEAAVKESSGMTKTILVMAALLMAAGILLSLVIATLLTRGVTKPPDKALNNAADVSKGKLGQPIVV
DTQDEIGRAIDALKLMDERLSATVEEGSRQAGDVGASMQEVISVINRMSDIIGEIAATSDKRSRGGEQIHVAINQIDAAA
QHNAALVEEAAAASQSLQEQARRMKEDMMFFRLANGTGAVTVPRASVPKAVAPIVKKVAKTKVMNPSSQFALATLEGKSG
HDDWQTF

Sequences:

>Translated_407_residues
MKNILIGIKSRLIAGFALFALLLTGVGAFGYYGLSTLGERIEALYASNTTPLVRVASVRAHSLRIRMNLWRAQVEASPQA
TAQAEKDIAASRAAIEDAWARYYPDGITSPSERELATQINAALKQLLPENDKVLALLRAEDYVAAKEYQDANVAVQADRL
NELIDKAINDNAAQAEAAVKESSGMTKTILVMAALLMAAGILLSLVIATLLTRGVTKPPDKALNNAADVSKGKLGQPIVV
DTQDEIGRAIDALKLMDERLSATVEEGSRQAGDVGASMQEVISVINRMSDIIGEIAATSDKRSRGGEQIHVAINQIDAAA
QHNAALVEEAAAASQSLQEQARRMKEDMMFFRLANGTGAVTVPRASVPKAVAPIVKKVAKTKVMNPSSQFALATLEGKSG
HDDWQTF
>Mature_407_residues
MKNILIGIKSRLIAGFALFALLLTGVGAFGYYGLSTLGERIEALYASNTTPLVRVASVRAHSLRIRMNLWRAQVEASPQA
TAQAEKDIAASRAAIEDAWARYYPDGITSPSERELATQINAALKQLLPENDKVLALLRAEDYVAAKEYQDANVAVQADRL
NELIDKAINDNAAQAEAAVKESSGMTKTILVMAALLMAAGILLSLVIATLLTRGVTKPPDKALNNAADVSKGKLGQPIVV
DTQDEIGRAIDALKLMDERLSATVEEGSRQAGDVGASMQEVISVINRMSDIIGEIAATSDKRSRGGEQIHVAINQIDAAA
QHNAALVEEAAAASQSLQEQARRMKEDMMFFRLANGTGAVTVPRASVPKAVAPIVKKVAKTKVMNPSSQFALATLEGKSG
HDDWQTF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=240, Percent_Identity=30, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787690, Length=90, Percent_Identity=42.2222222222222, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 43501; Mature: 43501

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILIGIKSRLIAGFALFALLLTGVGAFGYYGLSTLGERIEALYASNTTPLVRVASVRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
HSLRIRMNLWRAQVEASPQATAQAEKDIAASRAAIEDAWARYYPDGITSPSERELATQIN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AALKQLLPENDKVLALLRAEDYVAAKEYQDANVAVQADRLNELIDKAINDNAAQAEAAVK
HHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH
ESSGMTKTILVMAALLMAAGILLSLVIATLLTRGVTKPPDKALNNAADVSKGKLGQPIVV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCEEE
DTQDEIGRAIDALKLMDERLSATVEEGSRQAGDVGASMQEVISVINRMSDIIGEIAATSD
ECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
KRSRGGEQIHVAINQIDAAAQHNAALVEEAAAASQSLQEQARRMKEDMMFFRLANGTGAV
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCE
TVPRASVPKAVAPIVKKVAKTKVMNPSSQFALATLEGKSGHDDWQTF
EECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKNILIGIKSRLIAGFALFALLLTGVGAFGYYGLSTLGERIEALYASNTTPLVRVASVRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
HSLRIRMNLWRAQVEASPQATAQAEKDIAASRAAIEDAWARYYPDGITSPSERELATQIN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AALKQLLPENDKVLALLRAEDYVAAKEYQDANVAVQADRLNELIDKAINDNAAQAEAAVK
HHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH
ESSGMTKTILVMAALLMAAGILLSLVIATLLTRGVTKPPDKALNNAADVSKGKLGQPIVV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCEEE
DTQDEIGRAIDALKLMDERLSATVEEGSRQAGDVGASMQEVISVINRMSDIIGEIAATSD
ECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
KRSRGGEQIHVAINQIDAAAQHNAALVEEAAAASQSLQEQARRMKEDMMFFRLANGTGAV
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCE
TVPRASVPKAVAPIVKKVAKTKVMNPSSQFALATLEGKSGHDDWQTF
EECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]