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The map label for this gene is 94310604

Identifier: 94310604

GI number: 94310604

Start: 1798317

End: 1799744

Strand: Reverse

Name: 94310604

Synonym: Rmet_1664

Alternate gene names: NA

Gene position: 1799744-1798317 (Counterclockwise)

Preceding gene: 94310605

Following gene: 94310603

Centisome position: 45.82

GC content: 54.69

Gene sequence:

>1428_bases
ATGATCCGCCGCTTACAGATATTCACTATTCGTTTCGGGGAAGGAAATCTCATTCCTTCACTTGCTGCACTGCTCTTTAT
TGTCGGTATAGCAGGACCAATGTTGGCGTTGGCACAGTCGACATCCAAAGGATGCTGGGCGATCACGGGAACGACAACGA
ATCCAAACTCCTACCTCTATACCGATCCCGGTACTGTTGCGAGGAGCTGGATTGGCGCAGCCGATACGGCAGGGCAAGGC
GCGTATCCCATGACCATCTCGGTCAACATACCCGCTTTGGTACCAGATGGCACGCTGCTTGGAAGCGGCGTTTCGTCAAT
CAATAACCTCGGGGGAAGTGGCGTTGGAAGCTATAGCCCTGAGCAGGTATTGTTCCGATGCTCTCCGGATGCAGATGGAA
CCTTGTACGAGTACTATGCGACAAACGGCGATGCCGCTTACGCGGGCGCAACTGACGTAAGTGCGCAATCTGGCATCCCG
GGAACCTACCTTTCGTACTATACGGGGGTCGCGTCACGGATAACAAATATTGCTACAGGCGATTATCTTAGTCGGGCCTG
GAAAGCCCGGCCCCTAACCGGCCTCGACCGTGACACTCAGGGATGGATTCTCGTCAAAGCAAAAAACTTCAGCCAATACA
AGCTGGAGATGTTTCAGTGTACGGTTTGCCAATCTGGTGGTACGAATGGCACAGGAAGCTGGGCGCAATCTCAGCCACAA
GGATATGTCGCCTTCGTCGGGGGAGCCACTGGGACGGTCATCAAAGGCAACCTTGCTGTAGGCGCTGACTCCGCATCCAA
CTATTCAGGCTGGTATAGCACATGGCCAGGCGCAATCAATGCGTACCAGACGGTCACAGTTAGAAGGGCTGCAACCTGCG
CGGTAACCAACGCGACACCTTTAGTACGCTTTCCAATAATATCTGTTCGGGAACTGAATCAGGGAAACACAAGACAACTG
CCGGTGACTATACAAATGCAGTGTCAGAGCTCAACACCTTCCGGACTGTCTGCGTTCATAAGTGGAACAGCCGCGAATCA
GACTGCTCTAGGAGTGCTCGTCCAGCCCGCCAATGCGCAAAGCGCCGTCGCGGCAGGCCTGAAAACTGCAGGAAGTGGCG
TAACTTATCTACTCTCCGATGGCTATGGTACCGATCTGAGTGTTGCGACTGGTGTAGGCGTAGCACTGTCCAGACCAAAC
GGCACGCCATTGAACTTGCTCACAAATCAGTACGTTACAACAGGCGGTACCATCGACGGTTGGGATTCCGTGCTAAACGA
CGCAACGGCGAACGGGCCAGCGAGCGGCGGAGTGACTTCGTATACACGCTCCTTCAATGCAACCCTCAAGGCGTTCGCGC
CTGGCGTTACGCCGGTGACTGCCGGGCGATTCAATGCAACCGCCCAAGTGATCGTCCGGGTCCAGTGA

Upstream 100 bases:

>100_bases
CCGTTCAGCTCACACGGAAAAAACTGCCGTGCGAGTTCAAGAGCAAATGTCAATGGCAAATACATCTGCCGAAACCGGCA
GGAACTCGGAATAACCGCCC

Downstream 100 bases:

>100_bases
CTATGTTACTTATATCTGGACTCAAAGATTAGTAATCACTCCTATCTTACAAGGTGTATTAGCGATGTCCCCAATAGGGC
GCGACGAACCGAAGATTCGC

Product: fimbrial subunit

Products: NA

Alternate protein names: Adhesin MrkD; Fimbrial Subunit Outer Membrane Protein; Fimbriae; Fimbrial Adhesin; Fimbrial Protein Domain-Containing Protein; Fimbrial Protein

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MIRRLQIFTIRFGEGNLIPSLAALLFIVGIAGPMLALAQSTSKGCWAITGTTTNPNSYLYTDPGTVARSWIGAADTAGQG
AYPMTISVNIPALVPDGTLLGSGVSSINNLGGSGVGSYSPEQVLFRCSPDADGTLYEYYATNGDAAYAGATDVSAQSGIP
GTYLSYYTGVASRITNIATGDYLSRAWKARPLTGLDRDTQGWILVKAKNFSQYKLEMFQCTVCQSGGTNGTGSWAQSQPQ
GYVAFVGGATGTVIKGNLAVGADSASNYSGWYSTWPGAINAYQTVTVRRAATCAVTNATPLVRFPIISVRELNQGNTRQL
PVTIQMQCQSSTPSGLSAFISGTAANQTALGVLVQPANAQSAVAAGLKTAGSGVTYLLSDGYGTDLSVATGVGVALSRPN
GTPLNLLTNQYVTTGGTIDGWDSVLNDATANGPASGGVTSYTRSFNATLKAFAPGVTPVTAGRFNATAQVIVRVQ

Sequences:

>Translated_475_residues
MIRRLQIFTIRFGEGNLIPSLAALLFIVGIAGPMLALAQSTSKGCWAITGTTTNPNSYLYTDPGTVARSWIGAADTAGQG
AYPMTISVNIPALVPDGTLLGSGVSSINNLGGSGVGSYSPEQVLFRCSPDADGTLYEYYATNGDAAYAGATDVSAQSGIP
GTYLSYYTGVASRITNIATGDYLSRAWKARPLTGLDRDTQGWILVKAKNFSQYKLEMFQCTVCQSGGTNGTGSWAQSQPQ
GYVAFVGGATGTVIKGNLAVGADSASNYSGWYSTWPGAINAYQTVTVRRAATCAVTNATPLVRFPIISVRELNQGNTRQL
PVTIQMQCQSSTPSGLSAFISGTAANQTALGVLVQPANAQSAVAAGLKTAGSGVTYLLSDGYGTDLSVATGVGVALSRPN
GTPLNLLTNQYVTTGGTIDGWDSVLNDATANGPASGGVTSYTRSFNATLKAFAPGVTPVTAGRFNATAQVIVRVQ
>Mature_475_residues
MIRRLQIFTIRFGEGNLIPSLAALLFIVGIAGPMLALAQSTSKGCWAITGTTTNPNSYLYTDPGTVARSWIGAADTAGQG
AYPMTISVNIPALVPDGTLLGSGVSSINNLGGSGVGSYSPEQVLFRCSPDADGTLYEYYATNGDAAYAGATDVSAQSGIP
GTYLSYYTGVASRITNIATGDYLSRAWKARPLTGLDRDTQGWILVKAKNFSQYKLEMFQCTVCQSGGTNGTGSWAQSQPQ
GYVAFVGGATGTVIKGNLAVGADSASNYSGWYSTWPGAINAYQTVTVRRAATCAVTNATPLVRFPIISVRELNQGNTRQL
PVTIQMQCQSSTPSGLSAFISGTAANQTALGVLVQPANAQSAVAAGLKTAGSGVTYLLSDGYGTDLSVATGVGVALSRPN
GTPLNLLTNQYVTTGGTIDGWDSVLNDATANGPASGGVTSYTRSFNATLKAFAPGVTPVTAGRFNATAQVIVRVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49007; Mature: 49007

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRLQIFTIRFGEGNLIPSLAALLFIVGIAGPMLALAQSTSKGCWAITGTTTNPNSYLY
CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEE
TDPGTVARSWIGAADTAGQGAYPMTISVNIPALVPDGTLLGSGVSSINNLGGSGVGSYSP
ECCCHHHHHHCCCCCCCCCCCCEEEEEEECCEECCCCCEECCCHHHHHHCCCCCCCCCCC
EQVLFRCSPDADGTLYEYYATNGDAAYAGATDVSAQSGIPGTYLSYYTGVASRITNIATG
CCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DYLSRAWKARPLTGLDRDTQGWILVKAKNFSQYKLEMFQCTVCQSGGTNGTGSWAQSQPQ
HHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC
GYVAFVGGATGTVIKGNLAVGADSASNYSGWYSTWPGAINAYQTVTVRRAATCAVTNATP
EEEEEEECCCCEEEECCEEECCCCCCCCCCCEECCCCCCCCEEEEEEEEEEEEEECCCCC
LVRFPIISVRELNQGNTRQLPVTIQMQCQSSTPSGLSAFISGTAANQTALGVLVQPANAQ
EEEECEEEEEECCCCCCEEEEEEEEEEECCCCCCCHHHHEECCCCCCEEEEEEEECCCCH
SAVAAGLKTAGSGVTYLLSDGYGTDLSVATGVGVALSRPNGTPLNLLTNQYVTTGGTIDG
HHHHHHHHCCCCCEEEEEECCCCCCEEHHCCCEEEEECCCCCEEEEEECCEEECCCCCCC
WDSVLNDATANGPASGGVTSYTRSFNATLKAFAPGVTPVTAGRFNATAQVIVRVQ
HHHHHCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MIRRLQIFTIRFGEGNLIPSLAALLFIVGIAGPMLALAQSTSKGCWAITGTTTNPNSYLY
CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEE
TDPGTVARSWIGAADTAGQGAYPMTISVNIPALVPDGTLLGSGVSSINNLGGSGVGSYSP
ECCCHHHHHHCCCCCCCCCCCCEEEEEEECCEECCCCCEECCCHHHHHHCCCCCCCCCCC
EQVLFRCSPDADGTLYEYYATNGDAAYAGATDVSAQSGIPGTYLSYYTGVASRITNIATG
CCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DYLSRAWKARPLTGLDRDTQGWILVKAKNFSQYKLEMFQCTVCQSGGTNGTGSWAQSQPQ
HHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC
GYVAFVGGATGTVIKGNLAVGADSASNYSGWYSTWPGAINAYQTVTVRRAATCAVTNATP
EEEEEEECCCCEEEECCEEECCCCCCCCCCCEECCCCCCCCEEEEEEEEEEEEEECCCCC
LVRFPIISVRELNQGNTRQLPVTIQMQCQSSTPSGLSAFISGTAANQTALGVLVQPANAQ
EEEECEEEEEECCCCCCEEEEEEEEEEECCCCCCCHHHHEECCCCCCEEEEEEEECCCCH
SAVAAGLKTAGSGVTYLLSDGYGTDLSVATGVGVALSRPNGTPLNLLTNQYVTTGGTIDG
HHHHHHHHCCCCCEEEEEECCCCCCEEHHCCCEEEEECCCCCEEEEEECCEEECCCCCCC
WDSVLNDATANGPASGGVTSYTRSFNATLKAFAPGVTPVTAGRFNATAQVIVRVQ
HHHHHCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA