| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is creD [H]
Identifier: 94310592
GI number: 94310592
Start: 1784421
End: 1785863
Strand: Reverse
Name: creD [H]
Synonym: Rmet_1650
Alternate gene names: 94310592
Gene position: 1785863-1784421 (Counterclockwise)
Preceding gene: 94310593
Following gene: 94310590
Centisome position: 45.46
GC content: 62.3
Gene sequence:
>1443_bases ATGAAAAACTTTCGCTCGTACCCCTACAAGATTCTGGTCGCGGCGGGCCTGATCCTGGTGCTGTGGGCCGCCCTGCAGAT GGTCTTCAATCTAGTGGAGGAGCGCAGCCAGCTCCAGGAGTCCGCCGAGCAAAGCATCTGGCGTAGTTATGCCGGCCCGC AAACCTTGACTGGCCCGATCATCGTCCTGCCCTACAAGGAAGTCCTCGTGGAATCCGAAGCAAAGGATGCCAAGGGCCGC AAGACACAGACGCAGTACCGGGAGGCCACGCGACAGTTGCTGGTCTTCCCGAAGTCCCTCCAGGTTCAAACCGAGATCAA GCCCAGCGAACGGTACCGAGGCATCCACAAGGCGATTGTTTATGAGGCGGCGAGCCAGTGGACGGGCACCTTCGTCTTGC CTGACCTGAAGGCGGCCACCGCATTCGAGAAATCCGCCGGGCATGTCCGCTTCGAACTGGGCGAGCCGTTCGTGGCACTG GGCGTGTCCGACATGCGCGGCCTTGCTGCGGCGCCGGTCATGCAACTCGCCGGAAAGTCGCTGGAAATGGAGCAAGGCGC GCAACTCAACGGGTTGGGCCAGGGGCTCCATGCGGAGCTCGACCTCCGCGGTGCGGCCGGCAAGCCCGCCGACGCGCGCG TCGTGCCGTTCTCGCTCACGCTTTCCCTGCTTGGAAGCCGTTCCATCGCGTTCGCGCCGGTCGCGGACATGAATACGTTC AGTATGCGATCCGCATGGCCGCACCCCAGTTTCGATGGCGACTTCCTGCCACGCCAGCGCACGGTGGACGCCAGTGGCTT CCGCGCCGAATGGTCGGTCAACGCGCTCAACACCCACGTGCGAGAGCGCCTTCTGCCCATGGAGAATGGCGAGCGTACGC AACCAGCCGTGACCGCCCCGGCGAACGCCGCGGAGTCCATCTCCGTCACGCTGATCGATCCGGTCAACGGCTATGTACGC GTCGAGCGTGCCATCAAGTATGGGCTGCTGTTCGTACTACTGACCTTCGCCGGCTTCTATGTATTCGAGCAGATCAAGGG ACTGCGGATTCATCCGATCCAGTACCTGCTCGTTGGACTGGCGCTGACCCTGTTCTTCCTCATGCTCGTCAGCCTTTCCG AGCACGTGACATTCCTGCTCGCCTATCTGGCCGCGAGTGCCGCGTGCATCGGACTGCTCGCCTTCTACCTGACGTTCGTC CTCCACAGCTGGCGCCGAGGCGCGAGTTTCGCGGCGTTGATTGCGGCGCTGTATGGCGCGCTGTACGGCATTCTGGTTTC CGAGGACAACGCGCTACTGCTGGGTTCGACCCTGCTCTTCCTGGTGCTGGCCAGCATTATGACGGTGACACGCCGCGTGG ATTGGTACAACGGGGATATGCAATCCAGGTCGGAGGAAGAAGGGGGCGAAGGTAAAAGTAATAACGGGCGCGTGGCTCAG TAG
Upstream 100 bases:
>100_bases CGAAAGACGGAGCGCAGCCTTCACAACGGCTTCACGCCAACCACACGCCCTCCTCACCCGCGATCGCTAGTCTTGCTGCA TCTTCACTCGCAAGACAGTC
Downstream 100 bases:
>100_bases TGCCCAGGCCGCCTGCACCCAATCAGGAGGTGCGTAGCGCTTTTCCACGCGACAGATCCTCCGCCCCTTTTACGTGAGAT GGCTCGCGCAACCTGTGACT
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKNFRSYPYKILVAAGLILVLWAALQMVFNLVEERSQLQESAEQSIWRSYAGPQTLTGPIIVLPYKEVLVESEAKDAKGR KTQTQYREATRQLLVFPKSLQVQTEIKPSERYRGIHKAIVYEAASQWTGTFVLPDLKAATAFEKSAGHVRFELGEPFVAL GVSDMRGLAAAPVMQLAGKSLEMEQGAQLNGLGQGLHAELDLRGAAGKPADARVVPFSLTLSLLGSRSIAFAPVADMNTF SMRSAWPHPSFDGDFLPRQRTVDASGFRAEWSVNALNTHVRERLLPMENGERTQPAVTAPANAAESISVTLIDPVNGYVR VERAIKYGLLFVLLTFAGFYVFEQIKGLRIHPIQYLLVGLALTLFFLMLVSLSEHVTFLLAYLAASAACIGLLAFYLTFV LHSWRRGASFAALIAALYGALYGILVSEDNALLLGSTLLFLVLASIMTVTRRVDWYNGDMQSRSEEEGGEGKSNNGRVAQ
Sequences:
>Translated_480_residues MKNFRSYPYKILVAAGLILVLWAALQMVFNLVEERSQLQESAEQSIWRSYAGPQTLTGPIIVLPYKEVLVESEAKDAKGR KTQTQYREATRQLLVFPKSLQVQTEIKPSERYRGIHKAIVYEAASQWTGTFVLPDLKAATAFEKSAGHVRFELGEPFVAL GVSDMRGLAAAPVMQLAGKSLEMEQGAQLNGLGQGLHAELDLRGAAGKPADARVVPFSLTLSLLGSRSIAFAPVADMNTF SMRSAWPHPSFDGDFLPRQRTVDASGFRAEWSVNALNTHVRERLLPMENGERTQPAVTAPANAAESISVTLIDPVNGYVR VERAIKYGLLFVLLTFAGFYVFEQIKGLRIHPIQYLLVGLALTLFFLMLVSLSEHVTFLLAYLAASAACIGLLAFYLTFV LHSWRRGASFAALIAALYGALYGILVSEDNALLLGSTLLFLVLASIMTVTRRVDWYNGDMQSRSEEEGGEGKSNNGRVAQ >Mature_480_residues MKNFRSYPYKILVAAGLILVLWAALQMVFNLVEERSQLQESAEQSIWRSYAGPQTLTGPIIVLPYKEVLVESEAKDAKGR KTQTQYREATRQLLVFPKSLQVQTEIKPSERYRGIHKAIVYEAASQWTGTFVLPDLKAATAFEKSAGHVRFELGEPFVAL GVSDMRGLAAAPVMQLAGKSLEMEQGAQLNGLGQGLHAELDLRGAAGKPADARVVPFSLTLSLLGSRSIAFAPVADMNTF SMRSAWPHPSFDGDFLPRQRTVDASGFRAEWSVNALNTHVRERLLPMENGERTQPAVTAPANAAESISVTLIDPVNGYVR VERAIKYGLLFVLLTFAGFYVFEQIKGLRIHPIQYLLVGLALTLFFLMLVSLSEHVTFLLAYLAASAACIGLLAFYLTFV LHSWRRGASFAALIAALYGALYGILVSEDNALLLGSTLLFLVLASIMTVTRRVDWYNGDMQSRSEEEGGEGKSNNGRVAQ
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=432, Percent_Identity=33.3333333333333, Blast_Score=228, Evalue=8e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 52740; Mature: 52740
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFRSYPYKILVAAGLILVLWAALQMVFNLVEERSQLQESAEQSIWRSYAGPQTLTGPI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE IVLPYKEVLVESEAKDAKGRKTQTQYREATRQLLVFPKSLQVQTEIKPSERYRGIHKAIV EEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEECCCHHHHHHHHHHHHH YEAASQWTGTFVLPDLKAATAFEKSAGHVRFELGEPFVALGVSDMRGLAAAPVMQLAGKS HHHHHCCCCEEECCCCHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHCCCC LEMEQGAQLNGLGQGLHAELDLRGAAGKPADARVVPFSLTLSLLGSRSIAFAPVADMNTF CCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCH SMRSAWPHPSFDGDFLPRQRTVDASGFRAEWSVNALNTHVRERLLPMENGERTQPAVTAP HHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEECC ANAAESISVTLIDPVNGYVRVERAIKYGLLFVLLTFAGFYVFEQIKGLRIHPIQYLLVGL CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHH ALTLFFLMLVSLSEHVTFLLAYLAASAACIGLLAFYLTFVLHSWRRGASFAALIAALYGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LYGILVSEDNALLLGSTLLFLVLASIMTVTRRVDWYNGDMQSRSEEEGGEGKSNNGRVAQ HHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNFRSYPYKILVAAGLILVLWAALQMVFNLVEERSQLQESAEQSIWRSYAGPQTLTGPI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE IVLPYKEVLVESEAKDAKGRKTQTQYREATRQLLVFPKSLQVQTEIKPSERYRGIHKAIV EEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEECCCHHHHHHHHHHHHH YEAASQWTGTFVLPDLKAATAFEKSAGHVRFELGEPFVALGVSDMRGLAAAPVMQLAGKS HHHHHCCCCEEECCCCHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHCCCC LEMEQGAQLNGLGQGLHAELDLRGAAGKPADARVVPFSLTLSLLGSRSIAFAPVADMNTF CCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCH SMRSAWPHPSFDGDFLPRQRTVDASGFRAEWSVNALNTHVRERLLPMENGERTQPAVTAP HHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEECC ANAAESISVTLIDPVNGYVRVERAIKYGLLFVLLTFAGFYVFEQIKGLRIHPIQYLLVGL CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHH ALTLFFLMLVSLSEHVTFLLAYLAASAACIGLLAFYLTFVLHSWRRGASFAALIAALYGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LYGILVSEDNALLLGSTLLFLVLASIMTVTRRVDWYNGDMQSRSEEEGGEGKSNNGRVAQ HHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]