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The map label for this gene is hoxW

Identifier: 94310468

GI number: 94310468

Start: 1648626

End: 1649132

Strand: Direct

Name: hoxW

Synonym: Rmet_1526

Alternate gene names: NA

Gene position: 1648626-1649132 (Clockwise)

Preceding gene: 94310467

Following gene: 94310469

Centisome position: 41.97

GC content: 56.41

Gene sequence:

>507_bases
ATGAACGCACCCGCTGAGTTTCCCCTCGTGACCCTTGAGGATTTCGACGATCCGTCGAGCCTGATTTATGGCATCGGCAA
CGTCGGTCGGCAGGACGACGGACTGGGCTGGGCCTTGATCGACTGGCTGGAAGCGGAGTCGCTGTGCCCGAAAGCGGAAA
TCCAGAGGCACTATCAACTGCATCTCGAGGATGCCGACCTCATCAGCCGCAAGAGGCGGGTGTTGTTTATCGATGCCACG
AAGGACGCCTCGGTGGAATCATTCACGTTGGAGCGCGCAGAACCGAAAATGGACTTCAGCTTTACCTCGCACGCGATCTC
GATTCCATCGATCATGGCGACCTGTCAACAGTGTTTTCAGCGCTTGCCCGAAGTGTATGTGCTCGCGATCAGGGGGTATG
AATGGGAACTCAAAATGGGGTTGACCCAGAGGGCAAGGCAAAACCTGGACGATGCGACCGCTTATCTCGCGATGCGGCGG
AGTGTCGAGTCTCGTGAATTTAGTTAG

Upstream 100 bases:

>100_bases
GGCATACGCGCATACGATCCTTGCCTGAGCTGCGCCACCCACGCCCTGGGGCAGATGCCGCTGGTGGTTTCGGTCTATGA
CGCGGCGGGGGGGCTGATCG

Downstream 100 bases:

>100_bases
ACGGAGAACGTAATGAAAGAACTGGAAATCGACAGGATCGCCACGATGATCTATGAAGCCCCATTGGGCGAGTATATCGG
CCGAGATGGCGCCGGCATCC

Product: (NiFe) hydrogenase

Products: NA

Alternate protein names: HoxW Protein; Hydrogenase-Specific Protease; [NiFe] Hydrogenase C-Terminal Protease; Ni Fe-Hydrogenase Maturation Factor

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MNAPAEFPLVTLEDFDDPSSLIYGIGNVGRQDDGLGWALIDWLEAESLCPKAEIQRHYQLHLEDADLISRKRRVLFIDAT
KDASVESFTLERAEPKMDFSFTSHAISIPSIMATCQQCFQRLPEVYVLAIRGYEWELKMGLTQRARQNLDDATAYLAMRR
SVESREFS

Sequences:

>Translated_168_residues
MNAPAEFPLVTLEDFDDPSSLIYGIGNVGRQDDGLGWALIDWLEAESLCPKAEIQRHYQLHLEDADLISRKRRVLFIDAT
KDASVESFTLERAEPKMDFSFTSHAISIPSIMATCQQCFQRLPEVYVLAIRGYEWELKMGLTQRARQNLDDATAYLAMRR
SVESREFS
>Mature_168_residues
MNAPAEFPLVTLEDFDDPSSLIYGIGNVGRQDDGLGWALIDWLEAESLCPKAEIQRHYQLHLEDADLISRKRRVLFIDAT
KDASVESFTLERAEPKMDFSFTSHAISIPSIMATCQQCFQRLPEVYVLAIRGYEWELKMGLTQRARQNLDDATAYLAMRR
SVESREFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19208; Mature: 19208

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPAEFPLVTLEDFDDPSSLIYGIGNVGRQDDGLGWALIDWLEAESLCPKAEIQRHYQL
CCCCCCCCEEEECCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHEE
HLEDADLISRKRRVLFIDATKDASVESFTLERAEPKMDFSFTSHAISIPSIMATCQQCFQ
ECCCHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHH
RLPEVYVLAIRGYEWELKMGLTQRARQNLDDATAYLAMRRSVESREFS
HCCCEEEEEECCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAPAEFPLVTLEDFDDPSSLIYGIGNVGRQDDGLGWALIDWLEAESLCPKAEIQRHYQL
CCCCCCCCEEEECCCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHEE
HLEDADLISRKRRVLFIDATKDASVESFTLERAEPKMDFSFTSHAISIPSIMATCQQCFQ
ECCCHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHH
RLPEVYVLAIRGYEWELKMGLTQRARQNLDDATAYLAMRRSVESREFS
HCCCEEEEEECCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA