| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is cbbF2
Identifier: 94310453
GI number: 94310453
Start: 1632041
End: 1633138
Strand: Direct
Name: cbbF2
Synonym: Rmet_1511
Alternate gene names: 94310453
Gene position: 1632041-1633138 (Clockwise)
Preceding gene: 94310452
Following gene: 94310454
Centisome position: 41.55
GC content: 66.85
Gene sequence:
>1098_bases ATGCCACTGTCCCACCGCCAGACCCTGACCCGCTACCTGATCGAGGAACGACGCCGCTTCCCCGAGGCCAGCGGCGAACT CAACGCGCTGATCCTCGATGTGGCGCTGGCATGCAAGGCGCTGGCCCGCGTCGTGTCGTTCGGAGAACTCGGCGACGCGT TGAGCGACGGTTCCGCTGCGCCCACGGGGGGGGGCATCAACGTGCAGGGCGAGGTGCAGAAACCGCTGGACGTGCAGTCC AACGAGATGTTCATCCGCATGAACGAGTGGAACGGGCAACTCGCCGGCATGGCCAGCGAGGAGATGGAGGAGCCGTACCT GATCCCGAGCTCTTACCCGCGCGGCAAGTACCTGCTCGTGTTCGACCCACTGGACGGCAGCAGCAACATCGACGTCAACG TCTCCATCGGCAGCATCTTCTCGATCCTGCGCGCCCCGGCCGACGTGGTAGCCAGCGGCCGCGACGTGACCGAAGCGGAC TTCCTGCAGCCCGGCGCCGCACAGGTCGCCGCCGGCTACACGATCTACGGGCCGACGACGCAACTGGTGCTGACCGTCGG CAATGGTGTCGCGGCCTTCACGCTGGACCCCAACCTCGGCGAGTTCTTGCTGACGCGCAGCGACATCCGCGTACCCGAGC AGACGCAGGAGTTCGCAATCAACTCCAGCAACAGCCGGTTCTGGGAGCCGCCGGTCAAGCGCTACGTCGACGAATGCCTG GCCGGCAAGACCGGGCCGCGCGGCAAGGACTTCAACATGCGCTGGGTCGCGAGTATGGTCGCCGAGGCGCATCGCATCCT CATGCGCGGCGGTGTCTTCATGTACCCGCGCGACACCAAGGATCCCGCCAAGCCCGGTCGTCTGCGGCTGCTGTACGAGG CGAATCCGGTCGCAATGCTGATGGAACAGGCCGGCGGCCGCGCCAGCACGGGGCGCGAGCCGATCCTGGGGGTCAGTCCG ACGGCGCTGCATCAGCGCATCGGCTTGATCTTCGGCAGCAAGGATGAAGTCGAGCGCATCGAGCGCTATCACCAGGAGCC GGCGTCCAACGAGGCCGCCGCACCGCTGTTCGCCGAACGCAGCCTGTTCCGCGACTGA
Upstream 100 bases:
>100_bases TCGACCAGGTCGCGCTCACGACTCTTGCCGCGGCGGACATCCGGGTCAGCCGGGTGTTCGCCGCGGCAACCTGACACTGA ACCACTCCGAGGACTCACCC
Downstream 100 bases:
>100_bases ACCGAACACGAGCCACCCTGCGAGTCCACACCATGTCAGAAAAACACCCCATCATCGCCATCACGGGCAGTTCCGGCGCC GGCACGAGCTCGGTGACGCG
Product: fructose-1,6-bisphosphatase I
Products: NA
Alternate protein names: FBPase class 1 2; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 2
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MPLSHRQTLTRYLIEERRRFPEASGELNALILDVALACKALARVVSFGELGDALSDGSAAPTGGGINVQGEVQKPLDVQS NEMFIRMNEWNGQLAGMASEEMEEPYLIPSSYPRGKYLLVFDPLDGSSNIDVNVSIGSIFSILRAPADVVASGRDVTEAD FLQPGAAQVAAGYTIYGPTTQLVLTVGNGVAAFTLDPNLGEFLLTRSDIRVPEQTQEFAINSSNSRFWEPPVKRYVDECL AGKTGPRGKDFNMRWVASMVAEAHRILMRGGVFMYPRDTKDPAKPGRLRLLYEANPVAMLMEQAGGRASTGREPILGVSP TALHQRIGLIFGSKDEVERIERYHQEPASNEAAAPLFAERSLFRD
Sequences:
>Translated_365_residues MPLSHRQTLTRYLIEERRRFPEASGELNALILDVALACKALARVVSFGELGDALSDGSAAPTGGGINVQGEVQKPLDVQS NEMFIRMNEWNGQLAGMASEEMEEPYLIPSSYPRGKYLLVFDPLDGSSNIDVNVSIGSIFSILRAPADVVASGRDVTEAD FLQPGAAQVAAGYTIYGPTTQLVLTVGNGVAAFTLDPNLGEFLLTRSDIRVPEQTQEFAINSSNSRFWEPPVKRYVDECL AGKTGPRGKDFNMRWVASMVAEAHRILMRGGVFMYPRDTKDPAKPGRLRLLYEANPVAMLMEQAGGRASTGREPILGVSP TALHQRIGLIFGSKDEVERIERYHQEPASNEAAAPLFAERSLFRD >Mature_364_residues PLSHRQTLTRYLIEERRRFPEASGELNALILDVALACKALARVVSFGELGDALSDGSAAPTGGGINVQGEVQKPLDVQSN EMFIRMNEWNGQLAGMASEEMEEPYLIPSSYPRGKYLLVFDPLDGSSNIDVNVSIGSIFSILRAPADVVASGRDVTEADF LQPGAAQVAAGYTIYGPTTQLVLTVGNGVAAFTLDPNLGEFLLTRSDIRVPEQTQEFAINSSNSRFWEPPVKRYVDECLA GKTGPRGKDFNMRWVASMVAEAHRILMRGGVFMYPRDTKDPAKPGRLRLLYEANPVAMLMEQAGGRASTGREPILGVSPT ALHQRIGLIFGSKDEVERIERYHQEPASNEAAAPLFAERSLFRD
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family
Homologues:
Organism=Homo sapiens, GI22907028, Length=333, Percent_Identity=40.2402402402402, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI189083692, Length=345, Percent_Identity=41.1594202898551, Blast_Score=229, Evalue=2e-60, Organism=Homo sapiens, GI16579888, Length=345, Percent_Identity=41.1594202898551, Blast_Score=229, Evalue=2e-60, Organism=Escherichia coli, GI1790679, Length=340, Percent_Identity=43.2352941176471, Blast_Score=268, Evalue=6e-73, Organism=Caenorhabditis elegans, GI17508131, Length=336, Percent_Identity=42.2619047619048, Blast_Score=254, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6323409, Length=334, Percent_Identity=38.9221556886228, Blast_Score=236, Evalue=3e-63, Organism=Drosophila melanogaster, GI45550998, Length=341, Percent_Identity=44.574780058651, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI19921562, Length=341, Percent_Identity=44.574780058651, Blast_Score=248, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): F16A2_RALME (Q1LN82)
Other databases:
- EMBL: CP000352 - RefSeq: YP_583663.1 - ProteinModelPortal: Q1LN82 - SMR: Q1LN82 - STRING: Q1LN82 - GeneID: 4038314 - GenomeReviews: CP000352_GR - KEGG: rme:Rmet_1511 - eggNOG: COG0158 - HOGENOM: HBG731261 - OMA: PIRAYID - PhylomeDB: Q1LN82 - ProtClustDB: CLSK923881 - BioCyc: RMET266264:RMET_1511-MONOMER - GO: GO:0005737 - HAMAP: MF_01855 - InterPro: IPR000146 - InterPro: IPR020548 - PANTHER: PTHR11556 - PRINTS: PR00115
Pfam domain/function: PF00316 FBPase
EC number: =3.1.3.11
Molecular weight: Translated: 39934; Mature: 39803
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00124 FBPASE
Important sites: BINDING 221-221
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSHRQTLTRYLIEERRRFPEASGELNALILDVALACKALARVVSFGELGDALSDGSAA CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PTGGGINVQGEVQKPLDVQSNEMFIRMNEWNGQLAGMASEEMEEPYLIPSSYPRGKYLLV CCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCEECCCCCCCCCEEEE FDPLDGSSNIDVNVSIGSIFSILRAPADVVASGRDVTEADFLQPGAAQVAAGYTIYGPTT EECCCCCCCEEEEEEHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCHHHHHCCEEEECCCE QLVLTVGNGVAAFTLDPNLGEFLLTRSDIRVPEQTQEFAINSSNSRFWEPPVKRYVDECL EEEEEECCCEEEEEECCCCCHHHEECCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHH AGKTGPRGKDFNMRWVASMVAEAHRILMRGGVFMYPRDTKDPAKPGRLRLLYEANPVAML CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCHHHHH MEQAGGRASTGREPILGVSPTALHQRIGLIFGSKDEVERIERYHQEPASNEAAAPLFAER HHHCCCCCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCCCCHHHHH SLFRD HHCCC >Mature Secondary Structure PLSHRQTLTRYLIEERRRFPEASGELNALILDVALACKALARVVSFGELGDALSDGSAA CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PTGGGINVQGEVQKPLDVQSNEMFIRMNEWNGQLAGMASEEMEEPYLIPSSYPRGKYLLV CCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCEECCCCCCCCCEEEE FDPLDGSSNIDVNVSIGSIFSILRAPADVVASGRDVTEADFLQPGAAQVAAGYTIYGPTT EECCCCCCCEEEEEEHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCHHHHHCCEEEECCCE QLVLTVGNGVAAFTLDPNLGEFLLTRSDIRVPEQTQEFAINSSNSRFWEPPVKRYVDECL EEEEEECCCEEEEEECCCCCHHHEECCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHH AGKTGPRGKDFNMRWVASMVAEAHRILMRGGVFMYPRDTKDPAKPGRLRLLYEANPVAML CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCHHHHH MEQAGGRASTGREPILGVSPTALHQRIGLIFGSKDEVERIERYHQEPASNEAAAPLFAER HHHCCCCCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCCCCHHHHH SLFRD HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA