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The map label for this gene is cbbE1 [H]

Identifier: 94310452

GI number: 94310452

Start: 1631163

End: 1631861

Strand: Direct

Name: cbbE1 [H]

Synonym: Rmet_1510

Alternate gene names: 94310452

Gene position: 1631163-1631861 (Clockwise)

Preceding gene: 94310445

Following gene: 94310453

Centisome position: 41.53

GC content: 66.67

Gene sequence:

>699_bases
ATGACCATGCACCGCATCGCCCCCAGCATCCTCAGCGCCGACTTCGCATGCCTCGGTGACGAGGTACGCGGCGTGATCGC
CGCCGGCGCCGACTGGATTCACTTCGACGTGATGGACAACCATTACGTCCCGAACCTGACGATCGGCCCGGCGGTGGCGA
AGGCGCTCAAGCCCCACACGCGGCGCGCCGACGGCAGCTCGGCGCCGCTCGACGTGCATCTGATGGTGCACCCGGTGGAC
ACATTGGCGGCCGAGTTCGCGCAAGCCGGGGCCGGCCTCATCAGCTTTCATCCCGATGCCAGCGTTCACGTGGACCGCAC
CCTGCAGCTGATTCGCGGGGCCGGCTGCAAGGCCGGTCTGGCCTTCAATCCGGCCGCGCCGCTGGACGTGCTGGACTGGA
CCCTCGACAAGATCGACCTCGTGCTGATCATGAGCGTCAACCCCGGTTTCGGTGGGCAGAGCTTCATCGACAGCGCGCTG
CGCAAGATCGAGAGCGCCCGGCGTCTCATCGACCAGTCCGGCCGCGACATCCGTCTGCAAGTCGACGGCGGTATCAAGGT
CGACAACATTCGTCGTGCCGCCGATGCGGGCGCCGACACTTTCGTGGCCGGCAGCGCGATCTTCGGCCAATCGAACTACA
AGGCCGTCATTGATGCCATGCGGGCCGAACTGGCCGCGCCGATGGGCAAGGTGGCGTGA

Upstream 100 bases:

>100_bases
CGCGCCAGGAGGGCGCGGGCCGCGACATTCGCTACACGGCGCATTCGTGCGCGACCGACCGCGCCGAAGCGCAGCGCTAC
TGAACGAGGACTGCCGCAGC

Downstream 100 bases:

>100_bases
GGCTGGCGCATGGACGCACCCCTACCTCTGTATCGCATGCGCCAGACCAGCCGCCTGTTCGCCGATCGTAACCGCGTGCT
CGACCAGGTCGCGCTCACGA

Product: D-ribulose-5-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTMHRIAPSILSADFACLGDEVRGVIAAGADWIHFDVMDNHYVPNLTIGPAVAKALKPHTRRADGSSAPLDVHLMVHPVD
TLAAEFAQAGAGLISFHPDASVHVDRTLQLIRGAGCKAGLAFNPAAPLDVLDWTLDKIDLVLIMSVNPGFGGQSFIDSAL
RKIESARRLIDQSGRDIRLQVDGGIKVDNIRRAADAGADTFVAGSAIFGQSNYKAVIDAMRAELAAPMGKVA

Sequences:

>Translated_232_residues
MTMHRIAPSILSADFACLGDEVRGVIAAGADWIHFDVMDNHYVPNLTIGPAVAKALKPHTRRADGSSAPLDVHLMVHPVD
TLAAEFAQAGAGLISFHPDASVHVDRTLQLIRGAGCKAGLAFNPAAPLDVLDWTLDKIDLVLIMSVNPGFGGQSFIDSAL
RKIESARRLIDQSGRDIRLQVDGGIKVDNIRRAADAGADTFVAGSAIFGQSNYKAVIDAMRAELAAPMGKVA
>Mature_231_residues
TMHRIAPSILSADFACLGDEVRGVIAAGADWIHFDVMDNHYVPNLTIGPAVAKALKPHTRRADGSSAPLDVHLMVHPVDT
LAAEFAQAGAGLISFHPDASVHVDRTLQLIRGAGCKAGLAFNPAAPLDVLDWTLDKIDLVLIMSVNPGFGGQSFIDSALR
KIESARRLIDQSGRDIRLQVDGGIKVDNIRRAADAGADTFVAGSAIFGQSNYKAVIDAMRAELAAPMGKVA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=217, Percent_Identity=36.405529953917, Blast_Score=147, Evalue=8e-36,
Organism=Homo sapiens, GI219879828, Length=217, Percent_Identity=34.5622119815668, Blast_Score=137, Evalue=7e-33,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=29.7619047619048, Blast_Score=84, Evalue=9e-17,
Organism=Escherichia coli, GI1789788, Length=225, Percent_Identity=64.8888888888889, Blast_Score=298, Evalue=2e-82,
Organism=Escherichia coli, GI1790523, Length=232, Percent_Identity=31.8965517241379, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1790754, Length=212, Percent_Identity=29.7169811320755, Blast_Score=88, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17552948, Length=228, Percent_Identity=37.280701754386, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=227, Percent_Identity=38.7665198237885, Blast_Score=162, Evalue=6e-41,
Organism=Drosophila melanogaster, GI24586301, Length=217, Percent_Identity=35.4838709677419, Blast_Score=139, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24556; Mature: 24425

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMHRIAPSILSADFACLGDEVRGVIAAGADWIHFDVMDNHYVPNLTIGPAVAKALKPHT
CCHHHHHHHHHHHHHHHHCHHHHHHEECCCCEEEEEECCCCCCCCCEEHHHHHHHHCCCC
RRADGSSAPLDVHLMVHPVDTLAAEFAQAGAGLISFHPDASVHVDRTLQLIRGAGCKAGL
CCCCCCCCCEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCC
AFNPAAPLDVLDWTLDKIDLVLIMSVNPGFGGQSFIDSALRKIESARRLIDQSGRDIRLQ
EECCCCCHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
VDGGIKVDNIRRAADAGADTFVAGSAIFGQSNYKAVIDAMRAELAAPMGKVA
ECCCEEEHHHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TMHRIAPSILSADFACLGDEVRGVIAAGADWIHFDVMDNHYVPNLTIGPAVAKALKPHT
CHHHHHHHHHHHHHHHHCHHHHHHEECCCCEEEEEECCCCCCCCCEEHHHHHHHHCCCC
RRADGSSAPLDVHLMVHPVDTLAAEFAQAGAGLISFHPDASVHVDRTLQLIRGAGCKAGL
CCCCCCCCCEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCC
AFNPAAPLDVLDWTLDKIDLVLIMSVNPGFGGQSFIDSALRKIESARRLIDQSGRDIRLQ
EECCCCCHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
VDGGIKVDNIRRAADAGADTFVAGSAIFGQSNYKAVIDAMRAELAAPMGKVA
ECCCEEEHHHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]