| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94310421
Identifier: 94310421
GI number: 94310421
Start: 1599888
End: 1600910
Strand: Reverse
Name: 94310421
Synonym: Rmet_1479
Alternate gene names: NA
Gene position: 1600910-1599888 (Counterclockwise)
Preceding gene: 94310423
Following gene: 94310418
Centisome position: 40.76
GC content: 51.61
Gene sequence:
>1023_bases ATGCCATATCTAATTATGCCGTGGGAACACATTGCACCCGGCTACCATCGCGGCACGATTCTTTTGGGCAATGGGGCGAG CATCGCTGTTTCATCCAGCTTTGGCTATGGCTCGTTGTTAGATCACGCCCAGCAAGCCGGTTTACTTGCAGATGATGTGC AGCAACTTTTTCGCTCTTTCGGCACATCCGATTTCGAGCTAATCCTGCGGCTGGTCTGGCAAGCGTCCAACGTCAACAGG TCGCTACAGATACCGGATGATCGAACGCATCAAGCCTATCTGAATGTCAGAGAGTGTCTGATTCAGGCCGTTCGCGGCGT GCATCCCGCATACGACCTAGTGAGTGGTCACCTGCCCAGCATGTATCAATTCCTCAAAGGGTTCGATACGGTTCTATCGT TGAACTATGACTTGCTGGTCTACTGGACGATGACTTATGGACTCAACGTTCAGGACGATCACGTATTCAAGGATTGCTTC GTTTGGAACGGCATGTTCGACGATGCCTGGGGAAGATTTCGCGAACCTTTAAGGGAGCGAACGAACACTTTGGTGTTCTA TCCGCACGGAAGCTTGGCTCTGTGCCGAAATGTGGTGGAGCAGGAGTTCAAGATTCACAATGCCGGCGAAGGTTTGCTGG AGGCAATCCTTGCGGAGTGGCGCAGCGAGCGAGTTGTGCCCCTCTTTGTCAGCGAAGGAACGATGTCGCAGAAGGTGTCC TCTATCCAGAATAGCTACTACCTTTCTACAGTGTATCGTGAGGTGCTCACTTCGCAGCGGTTTACATTGACACTATTTGG CTGGGGACTAGGAGAGCACGACCGACATTTGTTGCGACGGATGCGTGGAACCGGCATCCAGCGAGTGGCAGTCTCTGTTT TTCGTGGCGATCAGGTCTATTGCAACTATGCGTACCAAGTCATTCAGGATGATTTAGGGCCTGTCCATGTGGATTTTTTT GATAGTGAAAGTCCTGGATGCTGGATTCATGCAGTGCCACCGGCACTGCCAGTATTTGGCTAA
Upstream 100 bases:
>100_bases CACGCCCACACAGCCCCAACACCGAGCTAGTGCGATAGCGGAAAATGACCTATTACAGCAGTTCGACGATGAAGTGCGAA GGAAATAGGGAGAACCATAT
Downstream 100 bases:
>100_bases CGCGTTCCTGCTGCGTAGATCTCTATATCGCGCACTATGCGACGTCATCACAACAGTCTGAGCCGCCTTTGCGGCTCAGA CTGTTGTGCTTTGACACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPYLIMPWEHIAPGYHRGTILLGNGASIAVSSSFGYGSLLDHAQQAGLLADDVQQLFRSFGTSDFELILRLVWQASNVNR SLQIPDDRTHQAYLNVRECLIQAVRGVHPAYDLVSGHLPSMYQFLKGFDTVLSLNYDLLVYWTMTYGLNVQDDHVFKDCF VWNGMFDDAWGRFREPLRERTNTLVFYPHGSLALCRNVVEQEFKIHNAGEGLLEAILAEWRSERVVPLFVSEGTMSQKVS SIQNSYYLSTVYREVLTSQRFTLTLFGWGLGEHDRHLLRRMRGTGIQRVAVSVFRGDQVYCNYAYQVIQDDLGPVHVDFF DSESPGCWIHAVPPALPVFG
Sequences:
>Translated_340_residues MPYLIMPWEHIAPGYHRGTILLGNGASIAVSSSFGYGSLLDHAQQAGLLADDVQQLFRSFGTSDFELILRLVWQASNVNR SLQIPDDRTHQAYLNVRECLIQAVRGVHPAYDLVSGHLPSMYQFLKGFDTVLSLNYDLLVYWTMTYGLNVQDDHVFKDCF VWNGMFDDAWGRFREPLRERTNTLVFYPHGSLALCRNVVEQEFKIHNAGEGLLEAILAEWRSERVVPLFVSEGTMSQKVS SIQNSYYLSTVYREVLTSQRFTLTLFGWGLGEHDRHLLRRMRGTGIQRVAVSVFRGDQVYCNYAYQVIQDDLGPVHVDFF DSESPGCWIHAVPPALPVFG >Mature_339_residues PYLIMPWEHIAPGYHRGTILLGNGASIAVSSSFGYGSLLDHAQQAGLLADDVQQLFRSFGTSDFELILRLVWQASNVNRS LQIPDDRTHQAYLNVRECLIQAVRGVHPAYDLVSGHLPSMYQFLKGFDTVLSLNYDLLVYWTMTYGLNVQDDHVFKDCFV WNGMFDDAWGRFREPLRERTNTLVFYPHGSLALCRNVVEQEFKIHNAGEGLLEAILAEWRSERVVPLFVSEGTMSQKVSS IQNSYYLSTVYREVLTSQRFTLTLFGWGLGEHDRHLLRRMRGTGIQRVAVSVFRGDQVYCNYAYQVIQDDLGPVHVDFFD SESPGCWIHAVPPALPVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38708; Mature: 38577
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLIMPWEHIAPGYHRGTILLGNGASIAVSSSFGYGSLLDHAQQAGLLADDVQQLFRSF CCEEECCHHHHCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHH GTSDFELILRLVWQASNVNRSLQIPDDRTHQAYLNVRECLIQAVRGVHPAYDLVSGHLPS CCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH MYQFLKGFDTVLSLNYDLLVYWTMTYGLNVQDDHVFKDCFVWNGMFDDAWGRFREPLRER HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH TNTLVFYPHGSLALCRNVVEQEFKIHNAGEGLLEAILAEWRSERVVPLFVSEGTMSQKVS CCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH SIQNSYYLSTVYREVLTSQRFTLTLFGWGLGEHDRHLLRRMRGTGIQRVAVSVFRGDQVY HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEE CNYAYQVIQDDLGPVHVDFFDSESPGCWIHAVPPALPVFG EHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCC >Mature Secondary Structure PYLIMPWEHIAPGYHRGTILLGNGASIAVSSSFGYGSLLDHAQQAGLLADDVQQLFRSF CEEECCHHHHCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHH GTSDFELILRLVWQASNVNRSLQIPDDRTHQAYLNVRECLIQAVRGVHPAYDLVSGHLPS CCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH MYQFLKGFDTVLSLNYDLLVYWTMTYGLNVQDDHVFKDCFVWNGMFDDAWGRFREPLRER HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH TNTLVFYPHGSLALCRNVVEQEFKIHNAGEGLLEAILAEWRSERVVPLFVSEGTMSQKVS CCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH SIQNSYYLSTVYREVLTSQRFTLTLFGWGLGEHDRHLLRRMRGTGIQRVAVSVFRGDQVY HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEE CNYAYQVIQDDLGPVHVDFFDSESPGCWIHAVPPALPVFG EHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA