| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is pps [H]
Identifier: 94310395
GI number: 94310395
Start: 1574130
End: 1576514
Strand: Direct
Name: pps [H]
Synonym: Rmet_1453
Alternate gene names: 94310395
Gene position: 1574130-1576514 (Clockwise)
Preceding gene: 94310392
Following gene: 94310396
Centisome position: 40.07
GC content: 61.97
Gene sequence:
>2385_bases ATGACCAACCAGGTAGATACCGGCGCCTACGTGCTGCCGTTCGAGCAGCTACGGATGCAGGACGTGGAAGTCGTCGGCGG CAAGAACTCGTCGTTGGGGGAAATGATCTCCCAGCTCGCTGGTGCCGGCGTTCGCGTTCCGGGCGGTTTCGCCACAACCG CGCTCGCATTCCGCGACTTTCTTGCGCACAACAACCTGACCAGCCGCATCTCCGAACGTTTGAAGACGCTCAACGTCGAC GACGTCAAGGCCTTGGCGGAAGCCGGTGCCGAGATTCGTGGCTGGGTAGCCGCGGCGCCGTTCCAGCCGCGTCTGGAGGC AGAGATCCGCGAGCATTACGCACGCGTGTCGGCTCGCGAAGGTGCCGAGGCATCGTTCGCAGTGCGTTCTTCGGCCACGG CCGAGGATTTGCCCGATGCATCGTTTGCCGGCCAGCAGGAGTCATACCTCAACGTCAGCGGCATCGACGACGTGCTGGAC AAGATCAAGCACGTGTTCGCCTCGCTCTACAACGACCGCGCTATCTCGTACCGTGTGCACAAGGGCTTTGCGCATGACGT GGTGGCGCTCTCCGCCGGCGTCCAGCGCATGGTGCGTTCGGATCTGGCGTCCTCGGGCGTGATGTTCACGATCGATACCG AATCGGGCTTCCCCGATGTGGTCTTCATCACGTCGAGCTACGGCCTGGGCGAAACGGTTGTGCAGGGCGCGGTGAACCCG GACGAGTTCTACGTCTTCAAGCCGATGCTGCAAGCCGGCAAGTACCCGATTATTCGCCGCTCGATCGGTTCGAAGCTGAT CAAGATGGAATTTACGAAGCCGGGCGAAGCTGGCCGCGTGAAGACGGTGGATGTGCCGCCTGAGCTGCGCAATCGCTATT CGATCACCGATGACGACGTGGCCGAACTCGCGCGTTACGCAATGATCATCGAGAAGCACTACGGCCGTCCGATGGACATC GAGTGGGGCAAGGACGGCAAGGATGGCAAGATCTACATCCTGCAGGCCCGCCCGGAGACCGTGAAGAGCCAGTCGGCCGG CAAGGCCGAGCAGCGCTTCAAGCTCAAGGGCACGGCACCGGTGCTGACCAGCGGTCGTGCGATCGGCCAGAAGATCGGTA CGGGTCCGGTGCGCGTGATCAACGATCCGTCCGAGATGGAACGCGTGCAACCTGGTGACGTGCTGGTGGCCGACATGACC GACCCGAACTGGGAGCCGGTGATGAAGCGCGCTGCGGCAATCGTGACCAACCGTGGCGGCCGTACCTGCCACGCTGCGAT CATCGCGCGTGAACTGGGCGTGCCCGCTGTGGTGGGTTGCGGCGATGCGACCGACTTGCTGAAGGATGGCACGCTGGTAA CGGTGTCTTGCGCCGAGGGTGACGAGGGCCGGATTTACGACGGCCTGCTCGAAACCGAAGTGACCGAGGTCCAGCGTGGC GAGATGCCCGAGATCGCGACCAAGATCATGATGAACGTTGGCAATCCCCAGCTTGCGTTCGACTTCGCGCAGATTCCGAA CCACGGCGTCGGCCTGGCCCGCCTCGAGTTCATCATCAACAACAACATTGGTGTTCACCCGAAGGCGATCCTCGACTATC CGCAAGTCGATGCCGACCTGAAGAAGGCCGTGGAATCGGTGGCGCGTGGCCACGCCAGCCCGCGTGCGTTCTATGTCGAC AAACTGGCGGAAGGCATTGCGACAATCGGTGCCGCGTTCTATCCGAAGCCCGTGATCGTGCGTCTGTCGGACTTCAAGTC GAATGAGTACAAGAAGCTGATCGGCGGTTCGCGCTACGAGCCGGACGAAGAGAACCCGATGCTGGGCTTCCGTGGCGCTT CGCGCTACATCTCCGACGACTTCGCCGAAGCGTTCGAGATGGAATGCAAGGCCATGAAGCGCGTGCGCGACGAGATGGGC CTGACCAACGTCGAGATCATGGTGCCGTTCGTGCGCACGCTGGGCCAGGCCGAGCGCGTGATCGAACTGCTGGCCAAGCA CGGCCTGAAGCGCGGTGAGAACGGTCTGCGCATCATCATGATGTGCGAAGTGCCGTCCAACGCGATCCTGGCCGAGGAGT TCCTGCAGTTCTTCGACGGTTTCTCGATCGGCTCGAACGATCTGACGCAGCTGACGCTGGGTCTCGATCGCGACTCGGGC ATGGAACTGCTTGCGAAAGACTTCGACGAACGTGATCCGGCAGTGCGTTTCATGCTGCAACGCGCCATTTCGACGGCGCT GCGCCTGAACAAGTACGTTGGCATCTGCGGTCAGGGCCCCTCGGATCATCCGGACTTCGCGGTCTGGCTGGCCAAGGAAG GTATCAAGTCGATCTCGCTGAACCCTGATTCTGTGGTCGAAACCTGGCAGCAACTGGCTTCGTGA
Upstream 100 bases:
>100_bases ATAGCACACGGAATTGCTCAGCCAAGCGATCCGCCGGGAACAGAACGCCAAGAATATGCCGGTCGGTGCAAAAGATTTCT TACTTTGTTTTGAGGCTTTT
Downstream 100 bases:
>100_bases GGCATTTCGCGTCACAATAGAGAAGATCACGTATAGACGGCACTTGGCCTTCCGCCAGCGTGCCGCGTGACACCGGCCCT GCGGCAGGTGTTCCATCTGC
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 794; Mature: 793
Protein sequence:
>794_residues MTNQVDTGAYVLPFEQLRMQDVEVVGGKNSSLGEMISQLAGAGVRVPGGFATTALAFRDFLAHNNLTSRISERLKTLNVD DVKALAEAGAEIRGWVAAAPFQPRLEAEIREHYARVSAREGAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLD KIKHVFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDLASSGVMFTIDTESGFPDVVFITSSYGLGETVVQGAVNP DEFYVFKPMLQAGKYPIIRRSIGSKLIKMEFTKPGEAGRVKTVDVPPELRNRYSITDDDVAELARYAMIIEKHYGRPMDI EWGKDGKDGKIYILQARPETVKSQSAGKAEQRFKLKGTAPVLTSGRAIGQKIGTGPVRVINDPSEMERVQPGDVLVADMT DPNWEPVMKRAAAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGRIYDGLLETEVTEVQRG EMPEIATKIMMNVGNPQLAFDFAQIPNHGVGLARLEFIINNNIGVHPKAILDYPQVDADLKKAVESVARGHASPRAFYVD KLAEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYISDDFAEAFEMECKAMKRVRDEMG LTNVEIMVPFVRTLGQAERVIELLAKHGLKRGENGLRIIMMCEVPSNAILAEEFLQFFDGFSIGSNDLTQLTLGLDRDSG MELLAKDFDERDPAVRFMLQRAISTALRLNKYVGICGQGPSDHPDFAVWLAKEGIKSISLNPDSVVETWQQLAS
Sequences:
>Translated_794_residues MTNQVDTGAYVLPFEQLRMQDVEVVGGKNSSLGEMISQLAGAGVRVPGGFATTALAFRDFLAHNNLTSRISERLKTLNVD DVKALAEAGAEIRGWVAAAPFQPRLEAEIREHYARVSAREGAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLD KIKHVFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDLASSGVMFTIDTESGFPDVVFITSSYGLGETVVQGAVNP DEFYVFKPMLQAGKYPIIRRSIGSKLIKMEFTKPGEAGRVKTVDVPPELRNRYSITDDDVAELARYAMIIEKHYGRPMDI EWGKDGKDGKIYILQARPETVKSQSAGKAEQRFKLKGTAPVLTSGRAIGQKIGTGPVRVINDPSEMERVQPGDVLVADMT DPNWEPVMKRAAAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGRIYDGLLETEVTEVQRG EMPEIATKIMMNVGNPQLAFDFAQIPNHGVGLARLEFIINNNIGVHPKAILDYPQVDADLKKAVESVARGHASPRAFYVD KLAEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYISDDFAEAFEMECKAMKRVRDEMG LTNVEIMVPFVRTLGQAERVIELLAKHGLKRGENGLRIIMMCEVPSNAILAEEFLQFFDGFSIGSNDLTQLTLGLDRDSG MELLAKDFDERDPAVRFMLQRAISTALRLNKYVGICGQGPSDHPDFAVWLAKEGIKSISLNPDSVVETWQQLAS >Mature_793_residues TNQVDTGAYVLPFEQLRMQDVEVVGGKNSSLGEMISQLAGAGVRVPGGFATTALAFRDFLAHNNLTSRISERLKTLNVDD VKALAEAGAEIRGWVAAAPFQPRLEAEIREHYARVSAREGAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLDK IKHVFASLYNDRAISYRVHKGFAHDVVALSAGVQRMVRSDLASSGVMFTIDTESGFPDVVFITSSYGLGETVVQGAVNPD EFYVFKPMLQAGKYPIIRRSIGSKLIKMEFTKPGEAGRVKTVDVPPELRNRYSITDDDVAELARYAMIIEKHYGRPMDIE WGKDGKDGKIYILQARPETVKSQSAGKAEQRFKLKGTAPVLTSGRAIGQKIGTGPVRVINDPSEMERVQPGDVLVADMTD PNWEPVMKRAAAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGRIYDGLLETEVTEVQRGE MPEIATKIMMNVGNPQLAFDFAQIPNHGVGLARLEFIINNNIGVHPKAILDYPQVDADLKKAVESVARGHASPRAFYVDK LAEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYISDDFAEAFEMECKAMKRVRDEMGL TNVEIMVPFVRTLGQAERVIELLAKHGLKRGENGLRIIMMCEVPSNAILAEEFLQFFDGFSIGSNDLTQLTLGLDRDSGM ELLAKDFDERDPAVRFMLQRAISTALRLNKYVGICGQGPSDHPDFAVWLAKEGIKSISLNPDSVVETWQQLAS
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=784, Percent_Identity=65.5612244897959, Blast_Score=1060, Evalue=0.0, Organism=Escherichia coli, GI1788726, Length=193, Percent_Identity=32.6424870466321, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788756, Length=431, Percent_Identity=23.8979118329466, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI48994992, Length=407, Percent_Identity=24.5700245700246, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1789193, Length=442, Percent_Identity=26.0180995475113, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17564524, Length=329, Percent_Identity=27.0516717325228, Blast_Score=94, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 86854; Mature: 86723
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQVDTGAYVLPFEQLRMQDVEVVGGKNSSLGEMISQLAGAGVRVPGGFATTALAFRDF CCCCCCCCEEEECHHHHHHHCEEEECCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHH LAHNNLTSRISERLKTLNVDDVKALAEAGAEIRGWVAAAPFQPRLEAEIREHYARVSARE HHCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHCCEEEECCCCCCHHHHHHHHHHHHHHCC GAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLDKIKHVFASLYNDRAISYRVH CCCCEEEECCCCCHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEEEC KGFAHDVVALSAGVQRMVRSDLASSGVMFTIDTESGFPDVVFITSSYGLGETVVQGAVNP CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHCCCCC DEFYVFKPMLQAGKYPIIRRSIGSKLIKMEFTKPGEAGRVKTVDVPPELRNRYSITDDDV CCEEEEHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHHCCCCCCCHHH AELARYAMIIEKHYGRPMDIEWGKDGKDGKIYILQARPETVKSQSAGKAEQRFKLKGTAP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCHHHEEEECCCCC VLTSGRAIGQKIGTGPVRVINDPSEMERVQPGDVLVADMTDPNWEPVMKRAAAIVTNRGG CHHCCHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC RTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGRIYDGLLETEVTEVQRG CCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCC EMPEIATKIMMNVGNPQLAFDFAQIPNHGVGLARLEFIINNNIGVHPKAILDYPQVDADL CCHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHH KKAVESVARGHASPRAFYVDKLAEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCC PDEENPMLGFRGASRYISDDFAEAFEMECKAMKRVRDEMGLTNVEIMVPFVRTLGQAERV CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IELLAKHGLKRGENGLRIIMMCEVPSNAILAEEFLQFFDGFSIGSNDLTQLTLGLDRDSG HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC MELLAKDFDERDPAVRFMLQRAISTALRLNKYVGICGQGPSDHPDFAVWLAKEGIKSISL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCEECC NPDSVVETWQQLAS CHHHHHHHHHHHCC >Mature Secondary Structure TNQVDTGAYVLPFEQLRMQDVEVVGGKNSSLGEMISQLAGAGVRVPGGFATTALAFRDF CCCCCCCEEEECHHHHHHHCEEEECCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHH LAHNNLTSRISERLKTLNVDDVKALAEAGAEIRGWVAAAPFQPRLEAEIREHYARVSARE HHCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHCCEEEECCCCCCHHHHHHHHHHHHHHCC GAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLDKIKHVFASLYNDRAISYRVH CCCCEEEECCCCCHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEEEC KGFAHDVVALSAGVQRMVRSDLASSGVMFTIDTESGFPDVVFITSSYGLGETVVQGAVNP CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHCCCCC DEFYVFKPMLQAGKYPIIRRSIGSKLIKMEFTKPGEAGRVKTVDVPPELRNRYSITDDDV CCEEEEHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHHCCCCCCCHHH AELARYAMIIEKHYGRPMDIEWGKDGKDGKIYILQARPETVKSQSAGKAEQRFKLKGTAP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCHHHEEEECCCCC VLTSGRAIGQKIGTGPVRVINDPSEMERVQPGDVLVADMTDPNWEPVMKRAAAIVTNRGG CHHCCHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC RTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGRIYDGLLETEVTEVQRG CCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCC EMPEIATKIMMNVGNPQLAFDFAQIPNHGVGLARLEFIINNNIGVHPKAILDYPQVDADL CCHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHH KKAVESVARGHASPRAFYVDKLAEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCC PDEENPMLGFRGASRYISDDFAEAFEMECKAMKRVRDEMGLTNVEIMVPFVRTLGQAERV CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IELLAKHGLKRGENGLRIIMMCEVPSNAILAEEFLQFFDGFSIGSNDLTQLTLGLDRDSG HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC MELLAKDFDERDPAVRFMLQRAISTALRLNKYVGICGQGPSDHPDFAVWLAKEGIKSISL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCEECC NPDSVVETWQQLAS CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]