| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94310344
Identifier: 94310344
GI number: 94310344
Start: 1511889
End: 1513985
Strand: Reverse
Name: 94310344
Synonym: Rmet_1402
Alternate gene names: NA
Gene position: 1513985-1511889 (Counterclockwise)
Preceding gene: 94310346
Following gene: 94310341
Centisome position: 38.54
GC content: 67.43
Gene sequence:
>2097_bases ATGGGGATTCAAGAGACGTTGCGCGGGCGTGGTTCGCGCATCTGGACGCCCGTGCTCGGCGTCATGACGGTTGCGGTGAT GGCGGCATGTGGTGGTGGCGGCGATAGCGGCAGCAACGGTGGCAGCAATGGCGGCGGCAGCCAGCCAGCCGCAACGGTGC AAGGCACTGCGGCATCCGGTGCATTCATGGGCGGCGCGCAGGTCACCATGTTCGATGCCGATGGCAAGACCGTCGGCATC CGCGTCGCCGACGCTAACGGACGGTACAGCTTCGACGTATCCGGCTTCCGCGCGCCGTTCGCCCTGCAGGCAACCGGCAC GGCCGGTGGCGAGACCGTGACCTATGTGTCCGTGCTGCCGACCAAACCCGCGAGCGGCTCCACGGTCACGGCCAACGTGA CGCCATTGACTACCGCGCTTGCGGCATTGTTGGCCGGCGGCAATCCGGCCGACCTGACCGGCGCCAGCGCGCTCAACAGC AAGGTCAGCAGCGCCGGCGTGCAGCAAGCCACGGCCGCCCTGCGTGCCGTGCTGGCCAATGTCGCTACCAGCGCCGGAAT GAACGCCGGAAGCTTCGACCCGATTTCCACCCCGCTCACCACCGAGGGCCAGGGCGCCGACGCGGTCATCGACCTTGTCC ACGTGACCCTGACCGCCAACGGCGTCAAGCTGGCATCCCGGGGGGCGCAACTCACGGGCGGTTCCATTCCGGAAGCCGTG CTCGACGCCAACGCATTGACCAAGCCGCCCGCCGCACTGCCGACGCCGACGGCCTCCACCAATGCCCGCACCTTCGAAGC GATCCGCGCGAACCTGCAAGCCTGCTTCGCCGCCGCCCCGTCCGCACGTGCCAGCGCCACCGCGCTGCTCACGGCGTGCG CACCGGCATTCGCCAGCGACTATCTGAACAACAGCTATTCGGCGGCCGTCGATTTCTCTGCCCTGTTCTCGTCGACCGAC ATGAACGGCGCCGTCTTCCGGGCCCCGATCGTGTTGTTCAACGGTAAGGCCGATAGCGGCGAGGCCACGGCATTCGTGCG CTTCCCGTTCGTGCGTGCCGACGGCAGCACGTCGCAGTTCACCCGCCGCGTGACCAACCGCGCCGGCACGTGGACGATGA CCGGCAACCAGCGCCAGTACGAAGCTGCCGTCACGCGCCGCATCAGCAAGGTGATCGAGCGCAATACGGGTGCAGGCATT GCTTCGCGGTATGAAACCAGTCTGCGCGTGTTGCTGAATCCGCAGACCGGCCTCGGCATCAAGGCGCAGCTCGTACGCGT CACGGGCCCCGGCCTGCCCAGTGCGGGTGTCGTGCTGGCCCGTTCGCGCGTATGCGGCTCAAGCGCCAACCTCGTGATCC AGAACCTGAACGGCTCGCTGACGTATGCCGCCAACGACCCCGTGGCGCCCAACGCGGTCATCAGCAGTTCAGGGCAGTCC AGCAGCACCGTGGTGCTGGCCGCGACGCCGCTGAAAGCTGGAGACGCGCTGACCTGGTCGTCGCTGAGTTCGGGCGCCAA CACCTATGCGTCGGCGCCGCTGTCCGACAACGACATCACCGCGATCCCGACCTTCGCCAGCTACACGTTCGACGTCTGGT ATCTGAACAACGATCTGTCCTACAAGACCGCTCTGCCGGCCACGCCAGACGACTCGTTCACCGTGACGTCGTCGGGCGGC GTGCTGATGCCGTCTGTCATCGCGCGCCAGACCTGGAACGAGATCGCGGAAGGCAGTCTCGATTTCGTGACGACGGGCGG CGGCAAGACCGGCGCCCAGACCACGGTCGATGTGAACTGGACACAGAACGCCGAGCCCGTGGACCGCGCCCTCGCCTTCG GCCGCCAGTTCGCCGCCGCAGTTGCGCCCGCGCCCGCAGCAGGCGATCGCACGTTCATCCAGACCAACGTGCCGTCGTAC CTGCAGCGCTCCGTCACGGTCAGCACCGCCAAGCAGGGCTCCAGCGCGTTCGTTAGCTGCAACGGCGCTACGTTCCCGGC CTTCGCTTCGGCCGGAGACCAGCGCACCGTCGAAATCCGCTCGACCACGGGCGACGATACCCAGAAGTTCGTGCGGGTGG TGGGTACCTACCGCTGA
Upstream 100 bases:
>100_bases GGGAACAGCATCATTGCCGCCTGCATATGCTCTCGGATCGGCGAACGCAAGAAATCCAATAAGACAGCCGGACTCGCCAT CCGGCACTCAGGGAAATCAA
Downstream 100 bases:
>100_bases TCCGGCAGCACAGGCTGCGAGAGAAGGCGCCAATGAAAAAGCCCCGCTTCGGCGGGGCTTTTTTTCTTTCCACGTCAGTC CAGATGCCTGACCCGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MGIQETLRGRGSRIWTPVLGVMTVAVMAACGGGGDSGSNGGSNGGGSQPAATVQGTAASGAFMGGAQVTMFDADGKTVGI RVADANGRYSFDVSGFRAPFALQATGTAGGETVTYVSVLPTKPASGSTVTANVTPLTTALAALLAGGNPADLTGASALNS KVSSAGVQQATAALRAVLANVATSAGMNAGSFDPISTPLTTEGQGADAVIDLVHVTLTANGVKLASRGAQLTGGSIPEAV LDANALTKPPAALPTPTASTNARTFEAIRANLQACFAAAPSARASATALLTACAPAFASDYLNNSYSAAVDFSALFSSTD MNGAVFRAPIVLFNGKADSGEATAFVRFPFVRADGSTSQFTRRVTNRAGTWTMTGNQRQYEAAVTRRISKVIERNTGAGI ASRYETSLRVLLNPQTGLGIKAQLVRVTGPGLPSAGVVLARSRVCGSSANLVIQNLNGSLTYAANDPVAPNAVISSSGQS SSTVVLAATPLKAGDALTWSSLSSGANTYASAPLSDNDITAIPTFASYTFDVWYLNNDLSYKTALPATPDDSFTVTSSGG VLMPSVIARQTWNEIAEGSLDFVTTGGGKTGAQTTVDVNWTQNAEPVDRALAFGRQFAAAVAPAPAAGDRTFIQTNVPSY LQRSVTVSTAKQGSSAFVSCNGATFPAFASAGDQRTVEIRSTTGDDTQKFVRVVGTYR
Sequences:
>Translated_698_residues MGIQETLRGRGSRIWTPVLGVMTVAVMAACGGGGDSGSNGGSNGGGSQPAATVQGTAASGAFMGGAQVTMFDADGKTVGI RVADANGRYSFDVSGFRAPFALQATGTAGGETVTYVSVLPTKPASGSTVTANVTPLTTALAALLAGGNPADLTGASALNS KVSSAGVQQATAALRAVLANVATSAGMNAGSFDPISTPLTTEGQGADAVIDLVHVTLTANGVKLASRGAQLTGGSIPEAV LDANALTKPPAALPTPTASTNARTFEAIRANLQACFAAAPSARASATALLTACAPAFASDYLNNSYSAAVDFSALFSSTD MNGAVFRAPIVLFNGKADSGEATAFVRFPFVRADGSTSQFTRRVTNRAGTWTMTGNQRQYEAAVTRRISKVIERNTGAGI ASRYETSLRVLLNPQTGLGIKAQLVRVTGPGLPSAGVVLARSRVCGSSANLVIQNLNGSLTYAANDPVAPNAVISSSGQS SSTVVLAATPLKAGDALTWSSLSSGANTYASAPLSDNDITAIPTFASYTFDVWYLNNDLSYKTALPATPDDSFTVTSSGG VLMPSVIARQTWNEIAEGSLDFVTTGGGKTGAQTTVDVNWTQNAEPVDRALAFGRQFAAAVAPAPAAGDRTFIQTNVPSY LQRSVTVSTAKQGSSAFVSCNGATFPAFASAGDQRTVEIRSTTGDDTQKFVRVVGTYR >Mature_697_residues GIQETLRGRGSRIWTPVLGVMTVAVMAACGGGGDSGSNGGSNGGGSQPAATVQGTAASGAFMGGAQVTMFDADGKTVGIR VADANGRYSFDVSGFRAPFALQATGTAGGETVTYVSVLPTKPASGSTVTANVTPLTTALAALLAGGNPADLTGASALNSK VSSAGVQQATAALRAVLANVATSAGMNAGSFDPISTPLTTEGQGADAVIDLVHVTLTANGVKLASRGAQLTGGSIPEAVL DANALTKPPAALPTPTASTNARTFEAIRANLQACFAAAPSARASATALLTACAPAFASDYLNNSYSAAVDFSALFSSTDM NGAVFRAPIVLFNGKADSGEATAFVRFPFVRADGSTSQFTRRVTNRAGTWTMTGNQRQYEAAVTRRISKVIERNTGAGIA SRYETSLRVLLNPQTGLGIKAQLVRVTGPGLPSAGVVLARSRVCGSSANLVIQNLNGSLTYAANDPVAPNAVISSSGQSS STVVLAATPLKAGDALTWSSLSSGANTYASAPLSDNDITAIPTFASYTFDVWYLNNDLSYKTALPATPDDSFTVTSSGGV LMPSVIARQTWNEIAEGSLDFVTTGGGKTGAQTTVDVNWTQNAEPVDRALAFGRQFAAAVAPAPAAGDRTFIQTNVPSYL QRSVTVSTAKQGSSAFVSCNGATFPAFASAGDQRTVEIRSTTGDDTQKFVRVVGTYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70904; Mature: 70772
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIQETLRGRGSRIWTPVLGVMTVAVMAACGGGGDSGSNGGSNGGGSQPAATVQGTAASG CCHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC AFMGGAQVTMFDADGKTVGIRVADANGRYSFDVSGFRAPFALQATGTAGGETVTYVSVLP EEECCCEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEC TKPASGSTVTANVTPLTTALAALLAGGNPADLTGASALNSKVSSAGVQQATAALRAVLAN CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VATSAGMNAGSFDPISTPLTTEGQGADAVIDLVHVTLTANGVKLASRGAQLTGGSIPEAV HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCCCCHHH LDANALTKPPAALPTPTASTNARTFEAIRANLQACFAAAPSARASATALLTACAPAFASD HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YLNNSYSAAVDFSALFSSTDMNGAVFRAPIVLFNGKADSGEATAFVRFPFVRADGSTSQF HHCCCCCCEEEHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCHHHH TRRVTNRAGTWTMTGNQRQYEAAVTRRISKVIERNTGAGIASRYETSLRVLLNPQTGLGI HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEECCCCCCCC KAQLVRVTGPGLPSAGVVLARSRVCGSSANLVIQNLNGSLTYAANDPVAPNAVISSSGQS EEEEEEEECCCCCCCCEEEEHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCEEECCCCC SSTVVLAATPLKAGDALTWSSLSSGANTYASAPLSDNDITAIPTFASYTFDVWYLNNDLS CCEEEEEECCCCCCCCEEHHHHCCCCCCEEECCCCCCCEEEEECCCCEEEEEEEECCCCC YKTALPATPDDSFTVTSSGGVLMPSVIARQTWNEIAEGSLDFVTTGGGKTGAQTTVDVNW EEEECCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECC TQNAEPVDRALAFGRQFAAAVAPAPAAGDRTFIQTNVPSYLQRSVTVSTAKQGSSAFVSC CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHEEEEECCCCCCEEEEE NGATFPAFASAGDQRTVEIRSTTGDDTQKFVRVVGTYR CCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure GIQETLRGRGSRIWTPVLGVMTVAVMAACGGGGDSGSNGGSNGGGSQPAATVQGTAASG CHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC AFMGGAQVTMFDADGKTVGIRVADANGRYSFDVSGFRAPFALQATGTAGGETVTYVSVLP EEECCCEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEC TKPASGSTVTANVTPLTTALAALLAGGNPADLTGASALNSKVSSAGVQQATAALRAVLAN CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VATSAGMNAGSFDPISTPLTTEGQGADAVIDLVHVTLTANGVKLASRGAQLTGGSIPEAV HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCCCCHHH LDANALTKPPAALPTPTASTNARTFEAIRANLQACFAAAPSARASATALLTACAPAFASD HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YLNNSYSAAVDFSALFSSTDMNGAVFRAPIVLFNGKADSGEATAFVRFPFVRADGSTSQF HHCCCCCCEEEHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCHHHH TRRVTNRAGTWTMTGNQRQYEAAVTRRISKVIERNTGAGIASRYETSLRVLLNPQTGLGI HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEECCCCCCCC KAQLVRVTGPGLPSAGVVLARSRVCGSSANLVIQNLNGSLTYAANDPVAPNAVISSSGQS EEEEEEEECCCCCCCCEEEEHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCEEECCCCC SSTVVLAATPLKAGDALTWSSLSSGANTYASAPLSDNDITAIPTFASYTFDVWYLNNDLS CCEEEEEECCCCCCCCEEHHHHCCCCCCEEECCCCCCCEEEEECCCCEEEEEEEECCCCC YKTALPATPDDSFTVTSSGGVLMPSVIARQTWNEIAEGSLDFVTTGGGKTGAQTTVDVNW EEEECCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECC TQNAEPVDRALAFGRQFAAAVAPAPAAGDRTFIQTNVPSYLQRSVTVSTAKQGSSAFVSC CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHEEEEECCCCCCEEEEE NGATFPAFASAGDQRTVEIRSTTGDDTQKFVRVVGTYR CCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA