| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is uspA2 [H]
Identifier: 94310276
GI number: 94310276
Start: 1445377
End: 1445841
Strand: Direct
Name: uspA2 [H]
Synonym: Rmet_1334
Alternate gene names: 94310276
Gene position: 1445377-1445841 (Clockwise)
Preceding gene: 94310275
Following gene: 94310277
Centisome position: 36.8
GC content: 61.72
Gene sequence:
>465_bases ATGTATTCACGATTTCTGGTGCCGCTTGATGGCAGTCCCACATCCCTTCTGGCCCTCGATCATGCGGCGGACATGGCACG CCTGAACGGCGCCACCGTGGTCCTGCTGCATGTCATCGAGCCGACCCGGCACAGCACGGGTTTCGAGCGCCCCAAGGTCT ACATCGAGGACGTCCGCCCTCACTTCCTGGCAGCCGGGCATGCCTTGTTGGACGAGGCCGCAAACCGGCTGCGTCAGGAC GGAATTGCAACAGAGACAGTACTGCTTGAAAGCACTGCAGAGCGGGTATCAGAGCAAATTGCCCGGCAGGCCAAGGAGAA CGATTGCGACCTGGTCATCCTGGGCACCCATGGACGCCGTGGGGTGGACCGGCTGCTGCTGGGAAGCGATGCGGAACAGG TGGCGCGTATCGCACCTGTTCCCGTGATGCTGGTGCGCCAGTCGCGCAGAAAAGAGATCACATGA
Upstream 100 bases:
>100_bases GCAGCAACGTGGCGATGAACGGCGGTCAGCACATGTCTTGAGCCCACTGCGCGAGCGGCTGACTTCCGACGCGGCAATCC GCAGCTCTTGGAGGAGTTCC
Downstream 100 bases:
>100_bases ATCAACAGCCCGTGGAGGCGCTCGCGCAGGTGCTCAAAGCGGTGTCGAGCGCCTCGTCGCCCATTTCAAAACCATGGCGC CGGTACGCACTGCGGCGGCG
Product: universal stress protein, UspA family
Products: NA
Alternate protein names: USP YxiE [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MYSRFLVPLDGSPTSLLALDHAADMARLNGATVVLLHVIEPTRHSTGFERPKVYIEDVRPHFLAAGHALLDEAANRLRQD GIATETVLLESTAERVSEQIARQAKENDCDLVILGTHGRRGVDRLLLGSDAEQVARIAPVPVMLVRQSRRKEIT
Sequences:
>Translated_154_residues MYSRFLVPLDGSPTSLLALDHAADMARLNGATVVLLHVIEPTRHSTGFERPKVYIEDVRPHFLAAGHALLDEAANRLRQD GIATETVLLESTAERVSEQIARQAKENDCDLVILGTHGRRGVDRLLLGSDAEQVARIAPVPVMLVRQSRRKEIT >Mature_154_residues MYSRFLVPLDGSPTSLLALDHAADMARLNGATVVLLHVIEPTRHSTGFERPKVYIEDVRPHFLAAGHALLDEAANRLRQD GIATETVLLESTAERVSEQIARQAKENDCDLVILGTHGRRGVDRLLLGSDAEQVARIAPVPVMLVRQSRRKEIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16995; Mature: 16995
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSRFLVPLDGSPTSLLALDHAADMARLNGATVVLLHVIEPTRHSTGFERPKVYIEDVRP CCCCEEEEECCCCCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCH HFLAAGHALLDEAANRLRQDGIATETVLLESTAERVSEQIARQAKENDCDLVILGTHGRR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC GVDRLLLGSDAEQVARIAPVPVMLVRQSRRKEIT CHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MYSRFLVPLDGSPTSLLALDHAADMARLNGATVVLLHVIEPTRHSTGFERPKVYIEDVRP CCCCEEEEECCCCCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCH HFLAAGHALLDEAANRLRQDGIATETVLLESTAERVSEQIARQAKENDCDLVILGTHGRR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC GVDRLLLGSDAEQVARIAPVPVMLVRQSRRKEIT CHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377 [H]