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The map label for this gene is hoxQ [H]

Identifier: 94310234

GI number: 94310234

Start: 1408127

End: 1408990

Strand: Reverse

Name: hoxQ [H]

Synonym: Rmet_1290

Alternate gene names: 94310234

Gene position: 1408990-1408127 (Counterclockwise)

Preceding gene: 94310235

Following gene: 94310233

Centisome position: 35.87

GC content: 67.48

Gene sequence:

>864_bases
ATGAAAGCCTTCCCCATTCCCGTCGTCGCCCTCGGCCCCGGCACCCAGACCGAGGACGAGCACCTCGACTACCTGCCCAT
GCCCAAGGACATGGACACCTACCGCGCGCCCATGCTGCCTGAGCCGGAGGAAATCGCCGGTCGCACGGCTGCGCGCGAGG
CCCTGGCCCAGGTGCTGGCGCTGCTGGACCAGGCCGCCGAGGGGGCGCCCGGCGGGCAGGTGGGTCTGCTGTCGCTGTCG
CCGGAAGACCGGCAGCTGGTCAACCAGGTGATGGGCGAGGGCGAGGCCAGCGCCATCGTGCGCGAGGAGTCCTCGTCGCT
GGAAGTGCGCATCCAGGAGTCGGTGTTCGCCGGTGTCTGGCGCATCATGAGTTTCAACGGCAGCGTGCTGGTGGACGATG
TGATCGAGGTCGGCCCCGTGCCCATGCAGCTGCGCATCACGGCCGACGAAGACGCTGAGAGCCTCTACCGTCCCTGGCGG
GGTCTCTTGCCTGCCAATGTACAGAACGCGCCGCTGCTGGTCGAAGAGATCCGCGACCAGATCGCGCGCTGGCAGCCAGG
CCAACCGCCGCACGTGGTCAATCTCACGCTGCTGCCGGTGACACCGGAAGACATCGCCTACCTCGACCACCAGCTGGGCA
CCGGCCGCGTGCTGCTGCTCTCGCGCGGCTATGGCAACTGCCGCATCACCAACACCCGGCACCCGCACTGCTGGCGCGTC
GTCTATTACAACTCCATGGACAGCGTGATCCTCAACACCGTCGAGGTGGTCGACATGCCCGAGGTGGCCATGGCGGCACC
GGAAGACCTGCGCGATTCGCACGAACGCCTGGCCGACGTGCTGGGCTATCTTGAGCAAGCCTGA

Upstream 100 bases:

>100_bases
CCGCCCTCGCGCCCGCCCACCATCGGCATTCCTGTCGTCAGCCAGACCGGCGGCAGCAGCTGCCACTGAGCCCGCCGACC
GAACCCCCACAGGAGACCGC

Downstream 100 bases:

>100_bases
ACGCCATGAACGGTGACCGATTCGAGGGCTTCGAAGGTTCGTACCTGGGCAACCGGGACGTGCTCAAGCCCGGTTCACGC
CTGGAGTGCAAGATCTGCTG

Product: nickel incorporation into hydrogenase-1 protein HoxQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKAFPIPVVALGPGTQTEDEHLDYLPMPKDMDTYRAPMLPEPEEIAGRTAAREALAQVLALLDQAAEGAPGGQVGLLSLS
PEDRQLVNQVMGEGEASAIVREESSSLEVRIQESVFAGVWRIMSFNGSVLVDDVIEVGPVPMQLRITADEDAESLYRPWR
GLLPANVQNAPLLVEEIRDQIARWQPGQPPHVVNLTLLPVTPEDIAYLDHQLGTGRVLLLSRGYGNCRITNTRHPHCWRV
VYYNSMDSVILNTVEVVDMPEVAMAAPEDLRDSHERLADVLGYLEQA

Sequences:

>Translated_287_residues
MKAFPIPVVALGPGTQTEDEHLDYLPMPKDMDTYRAPMLPEPEEIAGRTAAREALAQVLALLDQAAEGAPGGQVGLLSLS
PEDRQLVNQVMGEGEASAIVREESSSLEVRIQESVFAGVWRIMSFNGSVLVDDVIEVGPVPMQLRITADEDAESLYRPWR
GLLPANVQNAPLLVEEIRDQIARWQPGQPPHVVNLTLLPVTPEDIAYLDHQLGTGRVLLLSRGYGNCRITNTRHPHCWRV
VYYNSMDSVILNTVEVVDMPEVAMAAPEDLRDSHERLADVLGYLEQA
>Mature_287_residues
MKAFPIPVVALGPGTQTEDEHLDYLPMPKDMDTYRAPMLPEPEEIAGRTAAREALAQVLALLDQAAEGAPGGQVGLLSLS
PEDRQLVNQVMGEGEASAIVREESSSLEVRIQESVFAGVWRIMSFNGSVLVDDVIEVGPVPMQLRITADEDAESLYRPWR
GLLPANVQNAPLLVEEIRDQIARWQPGQPPHVVNLTLLPVTPEDIAYLDHQLGTGRVLLLSRGYGNCRITNTRHPHCWRV
VYYNSMDSVILNTVEVVDMPEVAMAAPEDLRDSHERLADVLGYLEQA

Specific function: Not Known. Could Enhance The Incorporation Of Nickel To The Hydrogenase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupH/hyaF family [H]

Homologues:

Organism=Escherichia coli, GI1787211, Length=288, Percent_Identity=31.9444444444444, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006894 [H]

Pfam domain/function: PF04809 HupH_C [H]

EC number: NA

Molecular weight: Translated: 31659; Mature: 31659

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFPIPVVALGPGTQTEDEHLDYLPMPKDMDTYRAPMLPEPEEIAGRTAAREALAQVLA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LLDQAAEGAPGGQVGLLSLSPEDRQLVNQVMGEGEASAIVREESSSLEVRIQESVFAGVW
HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHEEEECCCCCEEEEEHHHHHHHHH
RIMSFNGSVLVDDVIEVGPVPMQLRITADEDAESLYRPWRGLLPANVQNAPLLVEEIRDQ
HHHHCCCCEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IARWQPGQPPHVVNLTLLPVTPEDIAYLDHQLGTGRVLLLSRGYGNCRITNTRHPHCWRV
HHCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCEEEE
VYYNSMDSVILNTVEVVDMPEVAMAAPEDLRDSHERLADVLGYLEQA
EEECCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAFPIPVVALGPGTQTEDEHLDYLPMPKDMDTYRAPMLPEPEEIAGRTAAREALAQVLA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LLDQAAEGAPGGQVGLLSLSPEDRQLVNQVMGEGEASAIVREESSSLEVRIQESVFAGVW
HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHEEEECCCCCEEEEEHHHHHHHHH
RIMSFNGSVLVDDVIEVGPVPMQLRITADEDAESLYRPWRGLLPANVQNAPLLVEEIRDQ
HHHHCCCCEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IARWQPGQPPHVVNLTLLPVTPEDIAYLDHQLGTGRVLLLSRGYGNCRITNTRHPHCWRV
HHCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCEEEE
VYYNSMDSVILNTVEVVDMPEVAMAAPEDLRDSHERLADVLGYLEQA
EEECCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]