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The map label for this gene is ygdH [C]

Identifier: 94310209

GI number: 94310209

Start: 1386618

End: 1387484

Strand: Reverse

Name: ygdH [C]

Synonym: Rmet_1265

Alternate gene names: 94310209

Gene position: 1387484-1386618 (Counterclockwise)

Preceding gene: 94310210

Following gene: 94310208

Centisome position: 35.32

GC content: 59.75

Gene sequence:

>867_bases
ATGAAACCTGCAGAAGATCTCGCTGAACGCCTGCGCGCCATCCGCGAGTCACCAACATACCGTCTTGCGTACGAAGACAT
CGAGCTGCTTGGCCAGGACGAACTGCGGCCGCTGCGACTACAACTCGAACTGCTCAAACCTGAGCGCATCCTGCACGAGC
AAGGCATTCACTCGACGGTAGTGGTCTTCGGCAGCGCACGCGTGAGCGATGCCGAGACGGCAGAAGCCCGCCTTGGCGCG
CTGGAGCGTCAGGCGCTCGTCACTCCGGAGAATGTCGGGCTGAGGCAAGAGCTTGCGCGAGCCAATCGCCGGGTCGAACA
GGCACGTCACTACGAGCAAGCGAGGCGTTTCTCGGGCCTTATTTCGGCGCGTTTCCAGCAGCAAAACCGCCGTGATTTCG
TCGTCGTCACCGGGGGTGGGCCCGGCATCATGGAGGCCGCCAACCGCGGTGCTTTCGAGGTTGGCGCACGTTCGATTGGC
CTCAACATCACGCTGCCCCACGAACAGGCACCCAACCCCTACATGTGCCCGGATTTGGCGTTCCGATTCCACTATTTCGC
GCTGCGCAAGATGCACTTCTTGTTGCACGCCAAGGGCTTGGTGGCATTCCCGGGTGGCTATCGAACGCTCGATGAGCTGT
TCGAGGTGCTCACCTTGATCCAGACCGGAAAGATGCAGCGTATTCCGGTAGTGCTGGTCGGCCGTGCATTCTGGCATCGC
GTAGTTGATTTCGATCTTCTGCTCGACGAAGGCTATGTCTCTCCATCCGATCTCGACTTGTTCACCTGCGTAGACAAAGC
AGAGGAAATCGTCAGTGCCCTCGAACGCTTTTACGTCACCAGGGCAGCAGGCGATGGGGCAACATGA

Upstream 100 bases:

>100_bases
AAGCCTTCGCTGAACTCTTGCAGCAGCAACTCGGCTGGCAGGTCACGGTGCCCGAGTATGGCCATGCGCTGCGCTGGCCG
GACTTTCTGGCGCACGAGTG

Downstream 100 bases:

>100_bases
TTGGCATCGACGGGTATCGCTGGAGCCTGCGCGGCACCAAAGTGCAGCAGCCGATGCAGTGCTGTCAGCAGCACGTTGAA
AATGACCCAGCGGCAGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKPAEDLAERLRAIRESPTYRLAYEDIELLGQDELRPLRLQLELLKPERILHEQGIHSTVVVFGSARVSDAETAEARLGA
LERQALVTPENVGLRQELARANRRVEQARHYEQARRFSGLISARFQQQNRRDFVVVTGGGPGIMEAANRGAFEVGARSIG
LNITLPHEQAPNPYMCPDLAFRFHYFALRKMHFLLHAKGLVAFPGGYRTLDELFEVLTLIQTGKMQRIPVVLVGRAFWHR
VVDFDLLLDEGYVSPSDLDLFTCVDKAEEIVSALERFYVTRAAGDGAT

Sequences:

>Translated_288_residues
MKPAEDLAERLRAIRESPTYRLAYEDIELLGQDELRPLRLQLELLKPERILHEQGIHSTVVVFGSARVSDAETAEARLGA
LERQALVTPENVGLRQELARANRRVEQARHYEQARRFSGLISARFQQQNRRDFVVVTGGGPGIMEAANRGAFEVGARSIG
LNITLPHEQAPNPYMCPDLAFRFHYFALRKMHFLLHAKGLVAFPGGYRTLDELFEVLTLIQTGKMQRIPVVLVGRAFWHR
VVDFDLLLDEGYVSPSDLDLFTCVDKAEEIVSALERFYVTRAAGDGAT
>Mature_288_residues
MKPAEDLAERLRAIRESPTYRLAYEDIELLGQDELRPLRLQLELLKPERILHEQGIHSTVVVFGSARVSDAETAEARLGA
LERQALVTPENVGLRQELARANRRVEQARHYEQARRFSGLISARFQQQNRRDFVVVTGGGPGIMEAANRGAFEVGARSIG
LNITLPHEQAPNPYMCPDLAFRFHYFALRKMHFLLHAKGLVAFPGGYRTLDELFEVLTLIQTGKMQRIPVVLVGRAFWHR
VVDFDLLLDEGYVSPSDLDLFTCVDKAEEIVSALERFYVTRAAGDGAT

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32498; Mature: 32498

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAEDLAERLRAIRESPTYRLAYEDIELLGQDELRPLRLQLELLKPERILHEQGIHSTV
CCCHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCEEEHHEECCCHHHHHHHCCCCEEE
VVFGSARVSDAETAEARLGALERQALVTPENVGLRQELARANRRVEQARHYEQARRFSGL
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISARFQQQNRRDFVVVTGGGPGIMEAANRGAFEVGARSIGLNITLPHEQAPNPYMCPDLA
HHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCHHEEEEEEEECCCCCCCCCCCHHHH
FRFHYFALRKMHFLLHAKGLVAFPGGYRTLDELFEVLTLIQTGKMQRIPVVLVGRAFWHR
HHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHH
VVDFDLLLDEGYVSPSDLDLFTCVDKAEEIVSALERFYVTRAAGDGAT
HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKPAEDLAERLRAIRESPTYRLAYEDIELLGQDELRPLRLQLELLKPERILHEQGIHSTV
CCCHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCEEEHHEECCCHHHHHHHCCCCEEE
VVFGSARVSDAETAEARLGALERQALVTPENVGLRQELARANRRVEQARHYEQARRFSGL
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISARFQQQNRRDFVVVTGGGPGIMEAANRGAFEVGARSIGLNITLPHEQAPNPYMCPDLA
HHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCHHEEEEEEEECCCCCCCCCCCHHHH
FRFHYFALRKMHFLLHAKGLVAFPGGYRTLDELFEVLTLIQTGKMQRIPVVLVGRAFWHR
HHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHH
VVDFDLLLDEGYVSPSDLDLFTCVDKAEEIVSALERFYVTRAAGDGAT
HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA