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The map label for this gene is lutB [H]

Identifier: 94310152

GI number: 94310152

Start: 1326356

End: 1327768

Strand: Direct

Name: lutB [H]

Synonym: Rmet_1207

Alternate gene names: 94310152

Gene position: 1326356-1327768 (Clockwise)

Preceding gene: 94310151

Following gene: 94310153

Centisome position: 33.77

GC content: 63.98

Gene sequence:

>1413_bases
ATGCAAGTCCACAGCATGGAATTCAAGGCGCGCGCAGGGCAGAAGCTTGCCGACCAGCGCCTGCAGCAGAACCTCAAGAA
GCTCTCGACCAAGTTCGTCACCGCGCGCGCCGATGCGATCCGCGACATCGATTTCGATGCCACGCGCGCCGCGTTGAAGG
AGCGGCGCAACCGGGCGCTCGAGAATCTCGACGTCTGGCTGGCCAAGTTCGAGGAGAGCGCGACAAAGCGTGGCGCCACG
GTGTTGTTTGCCGAATCGACCGCCGATGCCGCGAGGCTAGTGGGCGAAATCGCGCAAAAGCATGGCGTGAAGAAGGTCAT
CAAGAGCAAGTCGATGGTGACCGAGGAGATGCGTCTGAACCAGGTGCTTGGCGAGATGGGCGTGCAGAGCATCGAGACCG
ACCTCGGCGAGTACATCCTGCAGATCAACGATGCCGAGCCGCCGTCGCACATCATTGCGCCGGTGATCCACAAAGACAAG
GACGAGATTGCCGACCTGTTCGCCAAGGTCCATAACAAGCCCCGTCTGACTGATATCCCCGAGATGACGCGCGAAGCGCG
CGAGGTGCTGCGGCCAGAGTTCCTGTCCGCCGACATGGGCGTCACGGGCGGGAATTTCATCATCGCCGAGACCGGCTCGG
TGGCCGTGGTCACCAACGAAGGCAATGAGGGCATGTGCACGATCATGCCGCGCGTGCACGTGGCCGTGACCGGTATCGAG
AAAGTCCTGCCGACGCTGGAGGATCTGGCCACCGTGATGCGGCTGCTGCCGCGTTCGGCAACGGGGCAGGCGATCTCGAA
CTATTTTTCGCTGCTGACTGGGCCGCGTGCCGAGGGCGAGCAGGACGGTCCGGAGCATATGTACTTCGTGCTCGTCGATG
GTGGACGCAGCGGCCTGATCGGCGGAGAGTTCCAGGAGATGCTGCGCTGCATCCGCTGCGGCGCCTGCATGAACCACTGC
CCCGTGTACCAGAAGATCGGCGGGCACGCCTATGGCTGGGTTTATCCGGGCCCGATGGGCAGCGTGCTGACGCCGAGTTA
CGTTGGGCTGGCGAATGCCCTGGACCTGCCGCAGGCAGCCACGCTGTGCGGCGAATGCAACCGCGTCTGTCCGGCGTCGA
TCCCGCTGTCCGATCTGCTGCGCAAGCTGCGCGAGAAACAGATGGAGCGACGCCTGCGTCCCTGGCAGGAGCGGGCGGCA
CTGCAGGCTTGGGGTTTTATTGCACGACGCCCGGATCTGTACGCGTTTGTCACGCGTATGGGTGCGCGCCTGCTCGCACG
CATGGGCGGCCGTGGAAAGCTGATCGGGAGCCTGCCGATGGCGGGCAAGGGGTGGACGGACACACGTGACATGCCGGCCC
CGAGCGGCCGAACGTTCCGCGAACTTTACAAGGAAAGGAGGGCGCGTTCATGA

Upstream 100 bases:

>100_bases
GAAGGCCGGCTGCGCCGCACGGGCGATACGCGCACACGTGTGCTGCATATTGCCCAGGTGCTGGCTGGCGACGCCTGAAG
ACCCGCAACGAGCCCCCACG

Downstream 100 bases:

>100_bases
GCGCCAATCAGGAGACGCTGGCCGCAATGCGGACTGCGCTGGATGCACACGTCGCCGGCAGCCTGCCGGTGGGGGATCTG
ATCGAACAGTGGCGTGCCTC

Product: 4Fe-4S ferredoxin, iron-sulfur binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQVHSMEFKARAGQKLADQRLQQNLKKLSTKFVTARADAIRDIDFDATRAALKERRNRALENLDVWLAKFEESATKRGAT
VLFAESTADAARLVGEIAQKHGVKKVIKSKSMVTEEMRLNQVLGEMGVQSIETDLGEYILQINDAEPPSHIIAPVIHKDK
DEIADLFAKVHNKPRLTDIPEMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAVVTNEGNEGMCTIMPRVHVAVTGIE
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAEGEQDGPEHMYFVLVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKIGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAATLCGECNRVCPASIPLSDLLRKLREKQMERRLRPWQERAA
LQAWGFIARRPDLYAFVTRMGARLLARMGGRGKLIGSLPMAGKGWTDTRDMPAPSGRTFRELYKERRARS

Sequences:

>Translated_470_residues
MQVHSMEFKARAGQKLADQRLQQNLKKLSTKFVTARADAIRDIDFDATRAALKERRNRALENLDVWLAKFEESATKRGAT
VLFAESTADAARLVGEIAQKHGVKKVIKSKSMVTEEMRLNQVLGEMGVQSIETDLGEYILQINDAEPPSHIIAPVIHKDK
DEIADLFAKVHNKPRLTDIPEMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAVVTNEGNEGMCTIMPRVHVAVTGIE
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAEGEQDGPEHMYFVLVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKIGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAATLCGECNRVCPASIPLSDLLRKLREKQMERRLRPWQERAA
LQAWGFIARRPDLYAFVTRMGARLLARMGGRGKLIGSLPMAGKGWTDTRDMPAPSGRTFRELYKERRARS
>Mature_470_residues
MQVHSMEFKARAGQKLADQRLQQNLKKLSTKFVTARADAIRDIDFDATRAALKERRNRALENLDVWLAKFEESATKRGAT
VLFAESTADAARLVGEIAQKHGVKKVIKSKSMVTEEMRLNQVLGEMGVQSIETDLGEYILQINDAEPPSHIIAPVIHKDK
DEIADLFAKVHNKPRLTDIPEMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAVVTNEGNEGMCTIMPRVHVAVTGIE
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAEGEQDGPEHMYFVLVDGGRSGLIGGEFQEMLRCIRCGACMNHC
PVYQKIGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAATLCGECNRVCPASIPLSDLLRKLREKQMERRLRPWQERAA
LQAWGFIARRPDLYAFVTRMGARLLARMGGRGKLIGSLPMAGKGWTDTRDMPAPSGRTFRELYKERRARS

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=476, Percent_Identity=39.7058823529412, Blast_Score=374, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52047; Mature: 52047

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVHSMEFKARAGQKLADQRLQQNLKKLSTKFVTARADAIRDIDFDATRAALKERRNRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ENLDVWLAKFEESATKRGATVLFAESTADAARLVGEIAQKHGVKKVIKSKSMVTEEMRLN
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLGEMGVQSIETDLGEYILQINDAEPPSHIIAPVIHKDKDEIADLFAKVHNKPRLTDIP
HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCH
EMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAVVTNEGNEGMCTIMPRVHVAVTGIE
HHHHHHHHHHCHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAEGEQDGPEHMYFVLVDGGRSGLI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH
TLCGECNRVCPASIPLSDLLRKLREKQMERRLRPWQERAALQAWGFIARRPDLYAFVTRM
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
GARLLARMGGRGKLIGSLPMAGKGWTDTRDMPAPSGRTFRELYKERRARS
HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVHSMEFKARAGQKLADQRLQQNLKKLSTKFVTARADAIRDIDFDATRAALKERRNRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ENLDVWLAKFEESATKRGATVLFAESTADAARLVGEIAQKHGVKKVIKSKSMVTEEMRLN
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLGEMGVQSIETDLGEYILQINDAEPPSHIIAPVIHKDKDEIADLFAKVHNKPRLTDIP
HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCH
EMTREAREVLRPEFLSADMGVTGGNFIIAETGSVAVVTNEGNEGMCTIMPRVHVAVTGIE
HHHHHHHHHHCHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATVMRLLPRSATGQAISNYFSLLTGPRAEGEQDGPEHMYFVLVDGGRSGLI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKIGGHAYGWVYPGPMGSVLTPSYVGLANALDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH
TLCGECNRVCPASIPLSDLLRKLREKQMERRLRPWQERAALQAWGFIARRPDLYAFVTRM
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
GARLLARMGGRGKLIGSLPMAGKGWTDTRDMPAPSGRTFRELYKERRARS
HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA