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The map label for this gene is pbpG [H]

Identifier: 94310149

GI number: 94310149

Start: 1323302

End: 1324483

Strand: Direct

Name: pbpG [H]

Synonym: Rmet_1204

Alternate gene names: 94310149

Gene position: 1323302-1324483 (Clockwise)

Preceding gene: 94310148

Following gene: 94310151

Centisome position: 33.69

GC content: 62.35

Gene sequence:

>1182_bases
ATGTTCCGGATCGAATCTCTCATGCCCCGATTCTTCGGCCTACCCCAATTGACCGCGCTCGCCACTTCGGCGGTCGTGTC
CATTGCCCTGCTGGCCGCGCCGGCCTCGTACGCAGCGACGTCGTCGACTGCGACGAAGTCGTCGTCGAAAAAGCAGGCAA
AATCCACTAAAACCACCAAAAAGGTGGCTTCCGCGAAGGCGGAGGCGTCGCCGCGCAAGGTGATCGTCGTGCGCAACGGC
AAACGTACCGTCGTTGCAAGCCGCGCGGCGCCAGTGCGTGCGGCGTTCGTGCCGTCCAAGCCGTCGCTGGGCGAGGCGAT
GGGCCTGCGCGATACCGAGGATGCGCTTGCCCTGCGATCGTCAGTGGCGCTGGTCATGGATCAGAACACCAATGAGGTGC
TGTTCCAGAAGAATCCCACGGCTGTGCTGCCGATCGCATCCATCACCAAGCTGATGACCGCGCTGGTGGTGATGGACGCA
CGTCTGCCGATGGACGAGATGCTCACGGTGACCGAGGAAGACCGCGATACCGAGAAGCACAGCAGTTCGCGTCTGCGCTT
TGGTACCCAGCTGACCCGCCAGGAGATGCTGCTGCTGGCGTTGATGTCGTCGGAAAACCGTGCTGCTTCGGCGCTGGGTC
GTAACTATCCGGGTGGCCTGCCGGCCTTTGTTGGCGCGATGAACCGCAAGGCGCGCGAGCTTGGCATGAGTGACAGCCAC
TTCGTCGATTCGAATGGCCTGTCGAGCAGCAATGTGTCGAGCGCGATGGATCTGGCCCGCCTGGTCAATGCCGCCTATCG
CAATCCGACGATCCGCGAGTACTCGACGCAACCCGAGCACGAAGTCACCGTGTTTGGCCGTCCGATGCACTACGTCAGCA
CCAACCGCCTGGTGCGTGGCGGCAACTGGGATATCGGTCTGCAGAAGACCGGTTATATCTCCGAAGCCGGCCAGTGCCTG
GTGATGCAGACACGCGTGAATGATCGCAATGTGGTGATGGTGTTCCTCGACTCGGTTGGCAAGCTGTCGCGCTTTGCCGA
TGCCACGCGCGTGCGTAGCTGGCTCGAGCATCAACCGGCGACGTCGGCGCAACCGCGCCCTTTCCCGTCGAATCCCAATC
TCACTCAGGGCCCTAAATCGCCCACGGCGATCCTGGTCTCGCAGCAGTCGCACGGAACCTGA

Upstream 100 bases:

>100_bases
TGCCAACCAAACTTTAACGAGCGCTTCTAAGTCATTAATCTTGCTAACAATTTCTTAATTTCCTAAACTAGCGCCATTCC
GCAGCCGCGCTGATCAGATC

Downstream 100 bases:

>100_bases
GCGACGACATCCGAACGTTTGGGCCGTACAAGAAAAACGCGCCGCCGGGCGAAAACCCGGCGGCGCGTTTTTTGTTTGCC
TCGGCTGCGATCAGGCGATC

Product: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MFRIESLMPRFFGLPQLTALATSAVVSIALLAAPASYAATSSTATKSSSKKQAKSTKTTKKVASAKAEASPRKVIVVRNG
KRTVVASRAAPVRAAFVPSKPSLGEAMGLRDTEDALALRSSVALVMDQNTNEVLFQKNPTAVLPIASITKLMTALVVMDA
RLPMDEMLTVTEEDRDTEKHSSSRLRFGTQLTRQEMLLLALMSSENRAASALGRNYPGGLPAFVGAMNRKARELGMSDSH
FVDSNGLSSSNVSSAMDLARLVNAAYRNPTIREYSTQPEHEVTVFGRPMHYVSTNRLVRGGNWDIGLQKTGYISEAGQCL
VMQTRVNDRNVVMVFLDSVGKLSRFADATRVRSWLEHQPATSAQPRPFPSNPNLTQGPKSPTAILVSQQSHGT

Sequences:

>Translated_393_residues
MFRIESLMPRFFGLPQLTALATSAVVSIALLAAPASYAATSSTATKSSSKKQAKSTKTTKKVASAKAEASPRKVIVVRNG
KRTVVASRAAPVRAAFVPSKPSLGEAMGLRDTEDALALRSSVALVMDQNTNEVLFQKNPTAVLPIASITKLMTALVVMDA
RLPMDEMLTVTEEDRDTEKHSSSRLRFGTQLTRQEMLLLALMSSENRAASALGRNYPGGLPAFVGAMNRKARELGMSDSH
FVDSNGLSSSNVSSAMDLARLVNAAYRNPTIREYSTQPEHEVTVFGRPMHYVSTNRLVRGGNWDIGLQKTGYISEAGQCL
VMQTRVNDRNVVMVFLDSVGKLSRFADATRVRSWLEHQPATSAQPRPFPSNPNLTQGPKSPTAILVSQQSHGT
>Mature_393_residues
MFRIESLMPRFFGLPQLTALATSAVVSIALLAAPASYAATSSTATKSSSKKQAKSTKTTKKVASAKAEASPRKVIVVRNG
KRTVVASRAAPVRAAFVPSKPSLGEAMGLRDTEDALALRSSVALVMDQNTNEVLFQKNPTAVLPIASITKLMTALVVMDA
RLPMDEMLTVTEEDRDTEKHSSSRLRFGTQLTRQEMLLLALMSSENRAASALGRNYPGGLPAFVGAMNRKARELGMSDSH
FVDSNGLSSSNVSSAMDLARLVNAAYRNPTIREYSTQPEHEVTVFGRPMHYVSTNRLVRGGNWDIGLQKTGYISEAGQCL
VMQTRVNDRNVVMVFLDSVGKLSRFADATRVRSWLEHQPATSAQPRPFPSNPNLTQGPKSPTAILVSQQSHGT

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=240, Percent_Identity=48.3333333333333, Blast_Score=234, Evalue=6e-63,
Organism=Escherichia coli, GI1787062, Length=259, Percent_Identity=27.027027027027, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786851, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 42552; Mature: 42552

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRIESLMPRFFGLPQLTALATSAVVSIALLAAPASYAATSSTATKSSSKKQAKSTKTTK
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHH
KVASAKAEASPRKVIVVRNGKRTVVASRAAPVRAAFVPSKPSLGEAMGLRDTEDALALRS
HHHHHHCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHH
SVALVMDQNTNEVLFQKNPTAVLPIASITKLMTALVVMDARLPMDEMLTVTEEDRDTEKH
CEEEEEECCCCEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCHHHH
SSSRLRFGTQLTRQEMLLLALMSSENRAASALGRNYPGGLPAFVGAMNRKARELGMSDSH
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
FVDSNGLSSSNVSSAMDLARLVNAAYRNPTIREYSTQPEHEVTVFGRPMHYVSTNRLVRG
EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCEEEECCCCEEEC
GNWDIGLQKTGYISEAGQCLVMQTRVNDRNVVMVFLDSVGKLSRFADATRVRSWLEHQPA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
TSAQPRPFPSNPNLTQGPKSPTAILVSQQSHGT
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MFRIESLMPRFFGLPQLTALATSAVVSIALLAAPASYAATSSTATKSSSKKQAKSTKTTK
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHH
KVASAKAEASPRKVIVVRNGKRTVVASRAAPVRAAFVPSKPSLGEAMGLRDTEDALALRS
HHHHHHCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHH
SVALVMDQNTNEVLFQKNPTAVLPIASITKLMTALVVMDARLPMDEMLTVTEEDRDTEKH
CEEEEEECCCCEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCHHHH
SSSRLRFGTQLTRQEMLLLALMSSENRAASALGRNYPGGLPAFVGAMNRKARELGMSDSH
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
FVDSNGLSSSNVSSAMDLARLVNAAYRNPTIREYSTQPEHEVTVFGRPMHYVSTNRLVRG
EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCEEEECCCCEEEC
GNWDIGLQKTGYISEAGQCLVMQTRVNDRNVVMVFLDSVGKLSRFADATRVRSWLEHQPA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
TSAQPRPFPSNPNLTQGPKSPTAILVSQQSHGT
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]