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The map label for this gene is uhpA [C]

Identifier: 94310097

GI number: 94310097

Start: 1262387

End: 1262932

Strand: Reverse

Name: uhpA [C]

Synonym: Rmet_1152

Alternate gene names: 94310097

Gene position: 1262932-1262387 (Counterclockwise)

Preceding gene: 94310100

Following gene: 94310091

Centisome position: 32.15

GC content: 63.0

Gene sequence:

>546_bases
ATGCCGTCCATCGACTACCAGACCGCTTTCCAGCTTGCGCCCGTCGGGCTGGTGCTGTCGCGCGCCCGCATGATCGAGGA
TTGCAATGACGAGGTTTGCCGGATCTTCGGCACCACGCGCGATGCCCTGGTCGGCGAGTCCTTCCAGGTGCTCTACCCCA
CCGCCGACGAGTTCGAGCGAACCGGTGCGCGGATCGTGCCAATCATGAATGCAAAGGGGATGTACTCGGACGAGCGGATC
ATGAAGCGCGCCAACGGCGAGCTGTTCTGGTGCCATGTCACCGGCCGCGCGCTGGACCGGCAGGATCCACTCGGCAGCGG
CATCTGGACGTTCGAAGATCTATCCCAGAAGCGGCCCGTAACAGCCGAGCTGACCGCGCGGGAGCGCGATATCGCCGCGC
AGCTGGTCGAGGGCAAAACCAGCAAGCAGATCGGCAAGCTGCTGGCAATCAGCCCACGCACGGTGGACATCTACCGGGCA
CGTCTGATGAAGAAATATGGCGCGCATACGGCGGTGGATCTGGTCCAACGCCTTGTCAATCACTGA

Upstream 100 bases:

>100_bases
CTGTAACGGTACAATCAGCGGTCAGGCCCCGCCGTTGCCGCCCCAAAGCATACGTCAACGCATACTGCCAACGCCATTAC
GTAAAAGTACATAAGGGATA

Downstream 100 bases:

>100_bases
GGATGCGCCCCCTCTCCCGCGAGACGGGAGAGGGAACCTGCCGATTGCGGATGTAAAGCCTACGCCTCGATCAGGCGACG
GATTTCGTCCGGAACCGGGA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Diguanylate Cyclase/Phosphodiesterase; Two-Component Sensor; Sigma-70 Region 4 Family; PAS/PAC Sensor Protein; Transcriptional Regulator Luxr Family; Transcription Regulator Protein; LuxR Family Regulatory Protein; PAS Domain-Containing Protein

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPSIDYQTAFQLAPVGLVLSRARMIEDCNDEVCRIFGTTRDALVGESFQVLYPTADEFERTGARIVPIMNAKGMYSDERI
MKRANGELFWCHVTGRALDRQDPLGSGIWTFEDLSQKRPVTAELTARERDIAAQLVEGKTSKQIGKLLAISPRTVDIYRA
RLMKKYGAHTAVDLVQRLVNH

Sequences:

>Translated_181_residues
MPSIDYQTAFQLAPVGLVLSRARMIEDCNDEVCRIFGTTRDALVGESFQVLYPTADEFERTGARIVPIMNAKGMYSDERI
MKRANGELFWCHVTGRALDRQDPLGSGIWTFEDLSQKRPVTAELTARERDIAAQLVEGKTSKQIGKLLAISPRTVDIYRA
RLMKKYGAHTAVDLVQRLVNH
>Mature_180_residues
PSIDYQTAFQLAPVGLVLSRARMIEDCNDEVCRIFGTTRDALVGESFQVLYPTADEFERTGARIVPIMNAKGMYSDERIM
KRANGELFWCHVTGRALDRQDPLGSGIWTFEDLSQKRPVTAELTARERDIAAQLVEGKTSKQIGKLLAISPRTVDIYRAR
LMKKYGAHTAVDLVQRLVNH

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20388; Mature: 20257

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSIDYQTAFQLAPVGLVLSRARMIEDCNDEVCRIFGTTRDALVGESFQVLYPTADEFER
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCEEEECCHHHHHH
TGARIVPIMNAKGMYSDERIMKRANGELFWCHVTGRALDRQDPLGSGIWTFEDLSQKRPV
CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCC
TAELTARERDIAAQLVEGKTSKQIGKLLAISPRTVDIYRARLMKKYGAHTAVDLVQRLVN
EEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
H
C
>Mature Secondary Structure 
PSIDYQTAFQLAPVGLVLSRARMIEDCNDEVCRIFGTTRDALVGESFQVLYPTADEFER
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCEEEECCHHHHHH
TGARIVPIMNAKGMYSDERIMKRANGELFWCHVTGRALDRQDPLGSGIWTFEDLSQKRPV
CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCC
TAELTARERDIAAQLVEGKTSKQIGKLLAISPRTVDIYRARLMKKYGAHTAVDLVQRLVN
EEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA