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The map label for this gene is yiaO [C]

Identifier: 94310095

GI number: 94310095

Start: 1260898

End: 1261929

Strand: Direct

Name: yiaO [C]

Synonym: Rmet_1150

Alternate gene names: 94310095

Gene position: 1260898-1261929 (Clockwise)

Preceding gene: 94310094

Following gene: 94310096

Centisome position: 32.1

GC content: 64.73

Gene sequence:

>1032_bases
ATGAAACGCCGTGCCCTGATGCTGTCCGTTGCCGCTTCGATCGCCGCCGCCGCGCTTGCGCCGGCCGGTGCGATGGCGCA
GACCTACAAGTCCGAATACAAGATGTCGCTGGTGCTCGGTCCCGCATTCCCGTGGGGCAAGGGCGGCGAGATCTGGGCAG
ACCTGGTGCGTCAGCGCACCAATGGCCGCATCAACATCAAGCTGTATCCGGGCACGTCGCTGGTGGCTGGCGACCAGACG
CGCGAGTTCTCGGCGATTCGCCAGGGCGTGATCGACATGGCCGTGGGCTCCACCATCAACTGGTCCCCGCAGGTCAAGGA
ACTGAACCTGTTCTCGCTCCCGTTCCTGATGCCCGACTACAAGGCGCTGGACTCGTTGACCCAGGGCGATGTGGGCAAGT
CGATCTTCGCCACGCTGGAGAAGGCGGGCGTGGTGCCGCTGGCCTGGGGCGAGAACGGTTTCCGCGAGGTCTCGAACTCG
AAGCACGAGATCCGCAAGCCGGAAGACCTCAAGGGTCTGAAGCTGCGTGTGGTGGGTTCGCCGTTGTACATCGAGACGTT
CAACGCGCTGGGCGCCAACCCCACGCAGATGAGCTGGGCCGATGCGCAGCCGGCCATGGCCTCCGGCGCCGTGGATGGCC
AGGAGAACCCGCAGAGCGTGTTCGCCGCTGCCAAGCTCTACACGGTGGGTCAGAAGTTCGTGACGACCTGGGGCTACGTG
GCCGACCCGCTGATCTTCGTGGTCAACAAGCAGATCTGGGAAAGCTGGACGCCGGCTGATCGCGAGATCGTCAAGCAGGC
CGCCATCGACGCAGGCAAGCAGGAAATCGCGCTGGCCCGCAAGGGGCTGAACGAGGCGGGCGCGCCGGCATGGAAAGACA
TGGAGCAGCACGGCGTGAAGGTGACCAGCCTGACGCCGGCCGAGCACGATGCCTTCCGCAAGGCCACCACCAAGGTCTAC
GACAAGTGGAAGAAGCAGATTGGCGCCGATCTGGTGACCAAGGCCGAAGCGTCCATCGCCAATCGCCGATGA

Upstream 100 bases:

>100_bases
GCCATGCTGATGGTGCTGGCCTATCCGCCGCTGGCCACCTGGCTGCCCGACTACCTGGGCTATTGATATGAACGAGAAAA
CGAAAAGAGGAGATTCCCGG

Downstream 100 bases:

>100_bases
AACACGTCTTCACCTTCGTGATGCCGATACGGTGGGGTGACATGGACGCCATGGGTCATGTCAACAACACCGTCTACTTC
CGCTACATGGAGCAGGCGCG

Product: TRAP dicarboxylate transporter, DctP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKRRALMLSVAASIAAAALAPAGAMAQTYKSEYKMSLVLGPAFPWGKGGEIWADLVRQRTNGRINIKLYPGTSLVAGDQT
REFSAIRQGVIDMAVGSTINWSPQVKELNLFSLPFLMPDYKALDSLTQGDVGKSIFATLEKAGVVPLAWGENGFREVSNS
KHEIRKPEDLKGLKLRVVGSPLYIETFNALGANPTQMSWADAQPAMASGAVDGQENPQSVFAAAKLYTVGQKFVTTWGYV
ADPLIFVVNKQIWESWTPADREIVKQAAIDAGKQEIALARKGLNEAGAPAWKDMEQHGVKVTSLTPAEHDAFRKATTKVY
DKWKKQIGADLVTKAEASIANRR

Sequences:

>Translated_343_residues
MKRRALMLSVAASIAAAALAPAGAMAQTYKSEYKMSLVLGPAFPWGKGGEIWADLVRQRTNGRINIKLYPGTSLVAGDQT
REFSAIRQGVIDMAVGSTINWSPQVKELNLFSLPFLMPDYKALDSLTQGDVGKSIFATLEKAGVVPLAWGENGFREVSNS
KHEIRKPEDLKGLKLRVVGSPLYIETFNALGANPTQMSWADAQPAMASGAVDGQENPQSVFAAAKLYTVGQKFVTTWGYV
ADPLIFVVNKQIWESWTPADREIVKQAAIDAGKQEIALARKGLNEAGAPAWKDMEQHGVKVTSLTPAEHDAFRKATTKVY
DKWKKQIGADLVTKAEASIANRR
>Mature_343_residues
MKRRALMLSVAASIAAAALAPAGAMAQTYKSEYKMSLVLGPAFPWGKGGEIWADLVRQRTNGRINIKLYPGTSLVAGDQT
REFSAIRQGVIDMAVGSTINWSPQVKELNLFSLPFLMPDYKALDSLTQGDVGKSIFATLEKAGVVPLAWGENGFREVSNS
KHEIRKPEDLKGLKLRVVGSPLYIETFNALGANPTQMSWADAQPAMASGAVDGQENPQSVFAAAKLYTVGQKFVTTWGYV
ADPLIFVVNKQIWESWTPADREIVKQAAIDAGKQEIALARKGLNEAGAPAWKDMEQHGVKVTSLTPAEHDAFRKATTKVY
DKWKKQIGADLVTKAEASIANRR

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=284, Percent_Identity=33.4507042253521, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37336; Mature: 37336

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRALMLSVAASIAAAALAPAGAMAQTYKSEYKMSLVLGPAFPWGKGGEIWADLVRQRT
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHC
NGRINIKLYPGTSLVAGDQTREFSAIRQGVIDMAVGSTINWSPQVKELNLFSLPFLMPDY
CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCH
KALDSLTQGDVGKSIFATLEKAGVVPLAWGENGFREVSNSKHEIRKPEDLKGLKLRVVGS
HHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCHHHHHCCCHHHCCCCCCCCCEEEEEECC
PLYIETFNALGANPTQMSWADAQPAMASGAVDGQENPQSVFAAAKLYTVGQKFVTTWGYV
CEEEEEHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ADPLIFVVNKQIWESWTPADREIVKQAAIDAGKQEIALARKGLNEAGAPAWKDMEQHGVK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHCCCE
VTSLTPAEHDAFRKATTKVYDKWKKQIGADLVTKAEASIANRR
EEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRRALMLSVAASIAAAALAPAGAMAQTYKSEYKMSLVLGPAFPWGKGGEIWADLVRQRT
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHC
NGRINIKLYPGTSLVAGDQTREFSAIRQGVIDMAVGSTINWSPQVKELNLFSLPFLMPDY
CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCH
KALDSLTQGDVGKSIFATLEKAGVVPLAWGENGFREVSNSKHEIRKPEDLKGLKLRVVGS
HHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCHHHHHCCCHHHCCCCCCCCCEEEEEECC
PLYIETFNALGANPTQMSWADAQPAMASGAVDGQENPQSVFAAAKLYTVGQKFVTTWGYV
CEEEEEHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ADPLIFVVNKQIWESWTPADREIVKQAAIDAGKQEIALARKGLNEAGAPAWKDMEQHGVK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHCCCE
VTSLTPAEHDAFRKATTKVYDKWKKQIGADLVTKAEASIANRR
EEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]