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The map label for this gene is hcaT [H]

Identifier: 94310084

GI number: 94310084

Start: 1246322

End: 1247419

Strand: Direct

Name: hcaT [H]

Synonym: Rmet_1139

Alternate gene names: 94310084

Gene position: 1246322-1247419 (Clockwise)

Preceding gene: 94310083

Following gene: 94310087

Centisome position: 31.73

GC content: 66.12

Gene sequence:

>1098_bases
GTGATATCGCCGTACGTCAGCCTGTTCTTCGCCGACCGGGGCTTTTCGCCGGTGCAAATCGGCGTGCTGATGGCCTGTTT
CCAGCTATCCCGCATCGTGGGCCCGTACCTGTGGGGCTGGCTCTCGGACGTGATGCACACACGCGTGAAGCTGTTGCGGC
TGGCCGCGGTCACGGCATTGCTGGCGTTTCTGGCCGTGCCCGGCATTCAGAGCTACGGCGGCATGATGGCGATGATGATA
GGGCTTAACCTGATCACGAGCGCCATGTCGCCGCTGGGTGACGCGCTGACGATCTCGACGCTGCGCCGCCACGGCGCGTT
CGACCATCGCTACGGGCGTGTGCGGATGTTCGGCTCGATCGGCTTTATCGCCGCGGTGCTGACGGGCGGCGCGTTGTTTG
AGCGCTTTGGCATGCAGGCGTTTCCGTGGCTGGCCAGCACGATGCTGGCGCTGTTCGCGCTGGTGGTCTTCGGCATGCGC
GACGCGGCCGACGAAGGCCCGCGCGCAGCACCCCCACCTGCGCTGCCGCTGCTGCGGCGGCCCGATGTGGCCTGGTTTTT
CGCATCGGCCTTCCTGATGATGTTCGCCCACGCGGCGCTCTACGTCTTCTACTCGCTCTATCTGGAGCAGCTTGGCTACA
GCAAGTTTGCGATTGGCGTGATGTGGACCATCGGCGTGGTGGCCGAGATCGTGTTCTTCTTCTATCAGGGCAAGCTGTTC
GGCGCGCTGGCGCTGCGCACGATTCTGGCAGGCACATTCGTGCTGGCCGCGCTGCGTTTCGGCATGACCGGCTACTTCGC
GCAGTACGCCTGGCTGATTGCGCTAGTGCAGATCCTGCACGCAGCCACCTTTGGCGCGCACCACAGTGCCAGCCTCAAGC
GCCTGCAACGCTGGTTCGCCGGCCCGCTGCAGGGGCGGGGGCAGGCGCTGTACACAGGGATTTCCTACGGCGTGGGCGGC
ACGCTCGGCGGCCTGGCGATGGGCTGGACGTGGAAGACGCTCGCGCCGATGCACACGTTCGGGCTAGCGGCGCTGGCGGC
GCTGATTGGCGCGGGATGCGCCGTGATGAGTTTTCGCGGGGAGCCCGAACGGGCCTGA

Upstream 100 bases:

>100_bases
CACCGGGCAAATCCTGAGCACTCGCGTTTCCGGGTCGATCGACCCGGGGACCTATCTCCGTTTCGGACTCTTCTATCTCG
GCTATTACGGCTATGTCGGC

Downstream 100 bases:

>100_bases
GATCGTCGATCTGACGGATGTCCGGCGCTACGCGCACCCCTCTTCGGTCTTTACACCGCTCGCGGAAGAGGGGTGCAAAC
CATCAGTTCTCCAGCAACTC

Product: putative MFS transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MISPYVSLFFADRGFSPVQIGVLMACFQLSRIVGPYLWGWLSDVMHTRVKLLRLAAVTALLAFLAVPGIQSYGGMMAMMI
GLNLITSAMSPLGDALTISTLRRHGAFDHRYGRVRMFGSIGFIAAVLTGGALFERFGMQAFPWLASTMLALFALVVFGMR
DAADEGPRAAPPPALPLLRRPDVAWFFASAFLMMFAHAALYVFYSLYLEQLGYSKFAIGVMWTIGVVAEIVFFFYQGKLF
GALALRTILAGTFVLAALRFGMTGYFAQYAWLIALVQILHAATFGAHHSASLKRLQRWFAGPLQGRGQALYTGISYGVGG
TLGGLAMGWTWKTLAPMHTFGLAALAALIGAGCAVMSFRGEPERA

Sequences:

>Translated_365_residues
MISPYVSLFFADRGFSPVQIGVLMACFQLSRIVGPYLWGWLSDVMHTRVKLLRLAAVTALLAFLAVPGIQSYGGMMAMMI
GLNLITSAMSPLGDALTISTLRRHGAFDHRYGRVRMFGSIGFIAAVLTGGALFERFGMQAFPWLASTMLALFALVVFGMR
DAADEGPRAAPPPALPLLRRPDVAWFFASAFLMMFAHAALYVFYSLYLEQLGYSKFAIGVMWTIGVVAEIVFFFYQGKLF
GALALRTILAGTFVLAALRFGMTGYFAQYAWLIALVQILHAATFGAHHSASLKRLQRWFAGPLQGRGQALYTGISYGVGG
TLGGLAMGWTWKTLAPMHTFGLAALAALIGAGCAVMSFRGEPERA
>Mature_365_residues
MISPYVSLFFADRGFSPVQIGVLMACFQLSRIVGPYLWGWLSDVMHTRVKLLRLAAVTALLAFLAVPGIQSYGGMMAMMI
GLNLITSAMSPLGDALTISTLRRHGAFDHRYGRVRMFGSIGFIAAVLTGGALFERFGMQAFPWLASTMLALFALVVFGMR
DAADEGPRAAPPPALPLLRRPDVAWFFASAFLMMFAHAALYVFYSLYLEQLGYSKFAIGVMWTIGVVAEIVFFFYQGKLF
GALALRTILAGTFVLAALRFGMTGYFAQYAWLIALVQILHAATFGAHHSASLKRLQRWFAGPLQGRGQALYTGISYGVGG
TLGGLAMGWTWKTLAPMHTFGLAALAALIGAGCAVMSFRGEPERA

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=325, Percent_Identity=29.2307692307692, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022814
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF01306 LacY_symp [H]

EC number: NA

Molecular weight: Translated: 39622; Mature: 39622

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9603882; 9205837; 9278503 [H]