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The map label for this gene is fdhD [H]

Identifier: 94310070

GI number: 94310070

Start: 1232431

End: 1233303

Strand: Direct

Name: fdhD [H]

Synonym: Rmet_1125

Alternate gene names: 94310070

Gene position: 1232431-1233303 (Clockwise)

Preceding gene: 94310069

Following gene: 94310071

Centisome position: 31.37

GC content: 66.67

Gene sequence:

>873_bases
ATGGTGGAAGACGAGTATGGGCAGGCCGGCTACGTCGAGCGCGAGATCCGGCGCCACACCGGGCGCCACACCGGTGGCCA
CACCGTTCCCGAGATCGATGACGTGGCGGAAGAAGTGCCGGTCGCGCTGGTCTACAACGGCATCTCGCACGCCGTGATGA
TGGCCACGCCGCTTGATCTGGAGGCGTTCGCGATTGGCTTCTCGCTGACCGAGGGGATCGTCGACAGCGTTGCCGAGATC
CGCGACATCGAGATCGAGCCGGGTTGCGACGGCATCGAGGTGCGTATCGAGATCGGCCAGCGTGCGTTCATGGCGTTGCG
CGCGCACCGCCGCACGCTGGCCGGGCGTACTGGCTGCGGCGTGTGCGGAACCGAAAGCCTGGCGCTGCTCGATCTGGAGC
CGACGCCGGTTGGCGTGCCCGCGCGACGGATTGAACCGACGCCTGCGATGCTCCGTCGCGCCACCGACGCATTGCAGGCG
CGACAGGTGCTGATGGCCGCCACCGGAGGCGTTCACGCGGCTGCATGGTGCGACGCGCAGGGCGACGTCGTTGCCGTGTT
CGAGGACGTGGGTCGCCACAATGCGCTGGACAAGCTGATCGGCCATCTGACCCGTACCCGCACGACGTTCGGCGACGGTT
TTGTCCTGCTGTCCAGCCGCGCCAGCTATGAACTCGTGCGCAAGACCGCGCGAATGCGCATCCAGATGCTGGCCACGATT
TCCGCGCCGACGTCGCTGGCCATCCGCATTGCAGCGCAGGCCGGCCTGCGCCTGCTGAGTTTCTGCCGCAAGGACGGTTT
CGTCGAGTACACAGCGCCAGCAGAGAACGAGGGTTTCGTATTACGATCTGAGCCGCTGGCGGTACCGGGCTGA

Upstream 100 bases:

>100_bases
CACTGGTGCCGCTGGAGAGCATTGGCGACCGATCCGGCACCCCGACTTCGAAATCGATCCCCGTGCTGTTGCGGCGCGCG
GGCTGACCGGAGGCAGGAGC

Downstream 100 bases:

>100_bases
CGCCCGGCCGGGCACCGCCAGCCAGATCGGAAATTACTGGCGAAAGGTTGGCGGTGTGACTCTCTACGAAAAACTTGCGA
CCGATATCGAGGCGCTGGTC

Product: formate dehydrogenase associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MVEDEYGQAGYVEREIRRHTGRHTGGHTVPEIDDVAEEVPVALVYNGISHAVMMATPLDLEAFAIGFSLTEGIVDSVAEI
RDIEIEPGCDGIEVRIEIGQRAFMALRAHRRTLAGRTGCGVCGTESLALLDLEPTPVGVPARRIEPTPAMLRRATDALQA
RQVLMAATGGVHAAAWCDAQGDVVAVFEDVGRHNALDKLIGHLTRTRTTFGDGFVLLSSRASYELVRKTARMRIQMLATI
SAPTSLAIRIAAQAGLRLLSFCRKDGFVEYTAPAENEGFVLRSEPLAVPG

Sequences:

>Translated_290_residues
MVEDEYGQAGYVEREIRRHTGRHTGGHTVPEIDDVAEEVPVALVYNGISHAVMMATPLDLEAFAIGFSLTEGIVDSVAEI
RDIEIEPGCDGIEVRIEIGQRAFMALRAHRRTLAGRTGCGVCGTESLALLDLEPTPVGVPARRIEPTPAMLRRATDALQA
RQVLMAATGGVHAAAWCDAQGDVVAVFEDVGRHNALDKLIGHLTRTRTTFGDGFVLLSSRASYELVRKTARMRIQMLATI
SAPTSLAIRIAAQAGLRLLSFCRKDGFVEYTAPAENEGFVLRSEPLAVPG
>Mature_290_residues
MVEDEYGQAGYVEREIRRHTGRHTGGHTVPEIDDVAEEVPVALVYNGISHAVMMATPLDLEAFAIGFSLTEGIVDSVAEI
RDIEIEPGCDGIEVRIEIGQRAFMALRAHRRTLAGRTGCGVCGTESLALLDLEPTPVGVPARRIEPTPAMLRRATDALQA
RQVLMAATGGVHAAAWCDAQGDVVAVFEDVGRHNALDKLIGHLTRTRTTFGDGFVLLSSRASYELVRKTARMRIQMLATI
SAPTSLAIRIAAQAGLRLLSFCRKDGFVEYTAPAENEGFVLRSEPLAVPG

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=251, Percent_Identity=47.808764940239, Blast_Score=221, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31301; Mature: 31301

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEDEYGQAGYVEREIRRHTGRHTGGHTVPEIDDVAEEVPVALVYNGISHAVMMATPLDL
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEEEECCHHCEEEEECCCCH
EAFAIGFSLTEGIVDSVAEIRDIEIEPGCDGIEVRIEIGQRAFMALRAHRRTLAGRTGCG
HHHEEHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCC
VCGTESLALLDLEPTPVGVPARRIEPTPAMLRRATDALQARQVLMAATGGVHAAAWCDAQ
CCCCCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
GDVVAVFEDVGRHNALDKLIGHLTRTRTTFGDGFVLLSSRASYELVRKTARMRIQMLATI
CCEEEEEHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SAPTSLAIRIAAQAGLRLLSFCRKDGFVEYTAPAENEGFVLRSEPLAVPG
CCCCHHEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MVEDEYGQAGYVEREIRRHTGRHTGGHTVPEIDDVAEEVPVALVYNGISHAVMMATPLDL
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEEEECCHHCEEEEECCCCH
EAFAIGFSLTEGIVDSVAEIRDIEIEPGCDGIEVRIEIGQRAFMALRAHRRTLAGRTGCG
HHHEEHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCC
VCGTESLALLDLEPTPVGVPARRIEPTPAMLRRATDALQARQVLMAATGGVHAAAWCDAQ
CCCCCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
GDVVAVFEDVGRHNALDKLIGHLTRTRTTFGDGFVLLSSRASYELVRKTARMRIQMLATI
CCEEEEEHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SAPTSLAIRIAAQAGLRLLSFCRKDGFVEYTAPAENEGFVLRSEPLAVPG
CCCCHHEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]