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The map label for this gene is trpH [H]

Identifier: 94310009

GI number: 94310009

Start: 1157281

End: 1158249

Strand: Direct

Name: trpH [H]

Synonym: Rmet_1064

Alternate gene names: 94310009

Gene position: 1157281-1158249 (Clockwise)

Preceding gene: 94310007

Following gene: 94310010

Centisome position: 29.46

GC content: 64.91

Gene sequence:

>969_bases
ATGGCGGACGAGGAAGGTATCGGTTTCGTAACGGTTCCATCATACCTTGCGGTCGTCGGCAATCCGGGCACGCCACCTTT
GCTGGCAGGGCTAAAAAGCCCTGCCGGGAGTAGAATGGTTGCCATGCAAAATGCTCACGCCATCAACGCCGATCTGCATT
GTCATTCCACCGTGTCCGACGGGCTGTTGTCGCCGTCCGACGTGGCGGCCCGGGCGCACGCCGGTGGCGTCGCGTTCTGG
TCGCTGACGGACCATGACGAGGTAGGCGGACAGATCGAGGCGCGCCGCGCCGCCGAAGCACTTGGCATGCGATATGTGCC
GGGCGTGGAAATATCGGTGACGTGGGCCGGGCAGACCGTCCACATCGTCGGCCTGCAGATCGACCCCTTTCATCCCGAAC
TGATCGATGGCCTGGCGAAAACGCGCGATGGCCGCGCGCGCCGGGCGCAGGATATTGGTGACGCGCTGGCGAAAGTCGGC
ATTTCCGGCGCCTACGATGGCGCGCTGCGCTACGTCGGCAATCCCGACCTGATTTCCCGTACGCACTTCGCGCGCTGGCT
GGTCGACGAAGGACGTTGTGCGACGATTGGCGATGTCTTCGCCGAATATCTCTCCGAAGGGCGTCCCGGCTTCGTGCCGC
ATCGCTGGGCCACGCTGGCCGAGGCCGTGGGCTGGATTCGGACCGCTGGCGGTATTCCAGTGATGGCGCATCCGGGGCGC
TACAACTACACCGATACGCAGCATGATGCGCTGTTCGACGAGTTCACGCAGCTTGGCGGCCGTGCCGTCGAGGTGGTGAC
TGGCAGCCACACGCCCGATCAGTTCCGCCGCTATGCCAACGTGGCACGCCACTATGGCTTGCTGGCGTCGCGCGGTTCCG
ATTTCCACGGACCTGGCGAGGGCCGTGTGGAACTCGGCGCGTTGCCCCCGCTGCCGGCCGATGTCACGCCGGTCTGGTAC
GACTGGTAA

Upstream 100 bases:

>100_bases
CACACCGGCCTGAAACGCCGCGAACAGCCCCACCGGGCCTGCGCCGACGATCAGCACATCGGTCTGGGTGGTTTCTGGCG
CGGAGGTGGGTGTCGTGGAC

Downstream 100 bases:

>100_bases
GCGCCCTCATAGCCAGCCCACATGTCCCAATACTTCGAGATTCATCCCGACAATCCGCAGGCGCGACTGGTCAAGCAGGC
CGCGCAGATCGTGCGCCAGG

Product: putative metal-dependent phosphoesterase (PHP family)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MADEEGIGFVTVPSYLAVVGNPGTPPLLAGLKSPAGSRMVAMQNAHAINADLHCHSTVSDGLLSPSDVAARAHAGGVAFW
SLTDHDEVGGQIEARRAAEALGMRYVPGVEISVTWAGQTVHIVGLQIDPFHPELIDGLAKTRDGRARRAQDIGDALAKVG
ISGAYDGALRYVGNPDLISRTHFARWLVDEGRCATIGDVFAEYLSEGRPGFVPHRWATLAEAVGWIRTAGGIPVMAHPGR
YNYTDTQHDALFDEFTQLGGRAVEVVTGSHTPDQFRRYANVARHYGLLASRGSDFHGPGEGRVELGALPPLPADVTPVWY
DW

Sequences:

>Translated_322_residues
MADEEGIGFVTVPSYLAVVGNPGTPPLLAGLKSPAGSRMVAMQNAHAINADLHCHSTVSDGLLSPSDVAARAHAGGVAFW
SLTDHDEVGGQIEARRAAEALGMRYVPGVEISVTWAGQTVHIVGLQIDPFHPELIDGLAKTRDGRARRAQDIGDALAKVG
ISGAYDGALRYVGNPDLISRTHFARWLVDEGRCATIGDVFAEYLSEGRPGFVPHRWATLAEAVGWIRTAGGIPVMAHPGR
YNYTDTQHDALFDEFTQLGGRAVEVVTGSHTPDQFRRYANVARHYGLLASRGSDFHGPGEGRVELGALPPLPADVTPVWY
DW
>Mature_321_residues
ADEEGIGFVTVPSYLAVVGNPGTPPLLAGLKSPAGSRMVAMQNAHAINADLHCHSTVSDGLLSPSDVAARAHAGGVAFWS
LTDHDEVGGQIEARRAAEALGMRYVPGVEISVTWAGQTVHIVGLQIDPFHPELIDGLAKTRDGRARRAQDIGDALAKVGI
SGAYDGALRYVGNPDLISRTHFARWLVDEGRCATIGDVFAEYLSEGRPGFVPHRWATLAEAVGWIRTAGGIPVMAHPGRY
NYTDTQHDALFDEFTQLGGRAVEVVTGSHTPDQFRRYANVARHYGLLASRGSDFHGPGEGRVELGALPPLPADVTPVWYD
W

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=279, Percent_Identity=40.1433691756272, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 34474; Mature: 34343

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEEGIGFVTVPSYLAVVGNPGTPPLLAGLKSPAGSRMVAMQNAHAINADLHCHSTVSD
CCCCCCCEEEECCCEEEEECCCCCCHHHHHCCCCCCCEEEEECCCCEECCCCEECCCHHC
GLLSPSDVAARAHAGGVAFWSLTDHDEVGGQIEARRAAEALGMRYVPGVEISVTWAGQTV
CCCCCHHHHHHHCCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEE
HIVGLQIDPFHPELIDGLAKTRDGRARRAQDIGDALAKVGISGAYDGALRYVGNPDLISR
EEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
THFARWLVDEGRCATIGDVFAEYLSEGRPGFVPHRWATLAEAVGWIRTAGGIPVMAHPGR
HHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC
YNYTDTQHDALFDEFTQLGGRAVEVVTGSHTPDQFRRYANVARHYGLLASRGSDFHGPGE
CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GRVELGALPPLPADVTPVWYDW
CCEEECCCCCCCCCCCCEEECC
>Mature Secondary Structure 
ADEEGIGFVTVPSYLAVVGNPGTPPLLAGLKSPAGSRMVAMQNAHAINADLHCHSTVSD
CCCCCCEEEECCCEEEEECCCCCCHHHHHCCCCCCCEEEEECCCCEECCCCEECCCHHC
GLLSPSDVAARAHAGGVAFWSLTDHDEVGGQIEARRAAEALGMRYVPGVEISVTWAGQTV
CCCCCHHHHHHHCCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEE
HIVGLQIDPFHPELIDGLAKTRDGRARRAQDIGDALAKVGISGAYDGALRYVGNPDLISR
EEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
THFARWLVDEGRCATIGDVFAEYLSEGRPGFVPHRWATLAEAVGWIRTAGGIPVMAHPGR
HHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC
YNYTDTQHDALFDEFTQLGGRAVEVVTGSHTPDQFRRYANVARHYGLLASRGSDFHGPGE
CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GRVELGALPPLPADVTPVWYDW
CCEEECCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]