| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94309996
Identifier: 94309996
GI number: 94309996
Start: 1144346
End: 1145167
Strand: Direct
Name: 94309996
Synonym: Rmet_1051
Alternate gene names: NA
Gene position: 1144346-1145167 (Clockwise)
Preceding gene: 94309995
Following gene: 94309997
Centisome position: 29.13
GC content: 65.94
Gene sequence:
>822_bases ATGCGCGACATCCTGCTCTTTTCCCACGCCAACGGTTTTCCGGTGCCGATCTATCGCAAGCTGTTCGGCGCGCTTGAGGA CACCTTCGACATCCGCGCCGTCGAGCGTTACGGCCACAATCCGAAGTTTCCGGTCACGCGCGAGTGGCCGCATCTGGTCG ACGAACTGCTTGGCGAGCTGGATCGCCCGGGGCGGAGCGGTGCCGACGCGCCCAAGGTCTGGCTGGTTGGCCATTCGCTG GGCGGTTTCCTCTCGCTGATGGCTGCGCTGCGTCGGCCGCAGCGGGTGCGGGGCGTGGTGATGCTGGATTCGCCAATCAT CGCCGGCTGGAAAGCGTCGCTGGTGCGCGCGTCCCAGATGCTGGGACTCGACGAGAAGCCGGGCCCCGCCGCCGTGACCA AGAACCGGCGCACCCATTGGCCCGATACCGACGCGGTCTGGAGTCATTTCCAGTCCAAGCGCAATTTCAAGGTATGGGAC CCCGAGGTTCTACGCGACTACGCCGAGCATGGTACCGAGCCCACTGGTGTGGCCAACGAACGCAAGCTGCGCTTCGATCG TGAGGTCGAATACTGGATCTACAGGACGCTGCCGACCAGCCTCGGCCGCAAGGTCGCGCGTGGCGCGCCGATCCCGGTCA GCTTCGTTGCCGGCACCCGCTCGCGCGAGGTAAGACAGGCGGGACTCGGCGCAACCCGCAAGCTTGTGGGCGACCGGCTG CGCTATATCGAAGGCGGCCACTTGTATCCAATGGAGCGGCCCCTCGAGACCGCCGGCCTGGTGCGGGACCTGATCGAGGA AATGCGCAAGTCCGGGCGCTGA
Upstream 100 bases:
>100_bases ACGAAGCCGATCGCTGGGGCCAGCCGGTACGGGCCCGCCGCGACCGAAGCTGATTCCTTTCATTCCAGGTTTTTCCGACC CATTCCATCGATCTGCCGCC
Downstream 100 bases:
>100_bases AGTCTGGGAAGCCGGCGCGCGCGGCGCCGGCTTGGCTTGTGGTACGGCGTGCAGTGCGACGTATGCGCCGCAGACCGCCA TTGCGTGCCGGGCCGACACC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolases Or Acyltransferases; Hydrolase/Acyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Family; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRDILLFSHANGFPVPIYRKLFGALEDTFDIRAVERYGHNPKFPVTREWPHLVDELLGELDRPGRSGADAPKVWLVGHSL GGFLSLMAALRRPQRVRGVVMLDSPIIAGWKASLVRASQMLGLDEKPGPAAVTKNRRTHWPDTDAVWSHFQSKRNFKVWD PEVLRDYAEHGTEPTGVANERKLRFDREVEYWIYRTLPTSLGRKVARGAPIPVSFVAGTRSREVRQAGLGATRKLVGDRL RYIEGGHLYPMERPLETAGLVRDLIEEMRKSGR
Sequences:
>Translated_273_residues MRDILLFSHANGFPVPIYRKLFGALEDTFDIRAVERYGHNPKFPVTREWPHLVDELLGELDRPGRSGADAPKVWLVGHSL GGFLSLMAALRRPQRVRGVVMLDSPIIAGWKASLVRASQMLGLDEKPGPAAVTKNRRTHWPDTDAVWSHFQSKRNFKVWD PEVLRDYAEHGTEPTGVANERKLRFDREVEYWIYRTLPTSLGRKVARGAPIPVSFVAGTRSREVRQAGLGATRKLVGDRL RYIEGGHLYPMERPLETAGLVRDLIEEMRKSGR >Mature_273_residues MRDILLFSHANGFPVPIYRKLFGALEDTFDIRAVERYGHNPKFPVTREWPHLVDELLGELDRPGRSGADAPKVWLVGHSL GGFLSLMAALRRPQRVRGVVMLDSPIIAGWKASLVRASQMLGLDEKPGPAAVTKNRRTHWPDTDAVWSHFQSKRNFKVWD PEVLRDYAEHGTEPTGVANERKLRFDREVEYWIYRTLPTSLGRKVARGAPIPVSFVAGTRSREVRQAGLGATRKLVGDRL RYIEGGHLYPMERPLETAGLVRDLIEEMRKSGR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30967; Mature: 30967
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: PS00120 LIPASE_SER ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDILLFSHANGFPVPIYRKLFGALEDTFDIRAVERYGHNPKFPVTREWPHLVDELLGEL CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH DRPGRSGADAPKVWLVGHSLGGFLSLMAALRRPQRVRGVVMLDSPIIAGWKASLVRASQM CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHH LGLDEKPGPAAVTKNRRTHWPDTDAVWSHFQSKRNFKVWDPEVLRDYAEHGTEPTGVANE HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC RKLRFDREVEYWIYRTLPTSLGRKVARGAPIPVSFVAGTRSREVRQAGLGATRKLVGDRL HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHH RYIEGGHLYPMERPLETAGLVRDLIEEMRKSGR HHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRDILLFSHANGFPVPIYRKLFGALEDTFDIRAVERYGHNPKFPVTREWPHLVDELLGEL CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH DRPGRSGADAPKVWLVGHSLGGFLSLMAALRRPQRVRGVVMLDSPIIAGWKASLVRASQM CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHH LGLDEKPGPAAVTKNRRTHWPDTDAVWSHFQSKRNFKVWDPEVLRDYAEHGTEPTGVANE HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC RKLRFDREVEYWIYRTLPTSLGRKVARGAPIPVSFVAGTRSREVRQAGLGATRKLVGDRL HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHH RYIEGGHLYPMERPLETAGLVRDLIEEMRKSGR HHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA