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The map label for this gene is hslR [H]

Identifier: 94309947

GI number: 94309947

Start: 1094380

End: 1094775

Strand: Direct

Name: hslR [H]

Synonym: Rmet_1002

Alternate gene names: 94309947

Gene position: 1094380-1094775 (Clockwise)

Preceding gene: 94309946

Following gene: 94309949

Centisome position: 27.86

GC content: 68.18

Gene sequence:

>396_bases
ATGCAAGTCGATTTCGAACCCGATGCGCGGCTGCGCATCGACAAATGGCTCTGGTGCGCGCGCTTCTTCAAGACGCGCTC
GCTGGCTGCCGAGGCGGTGGAGCGGGGCCGCGTGAGCGTCAACGGGCAGCCCTGCAAGAACTCGCGCGAGGTCAAGCCGG
GCGACACCGTGATATTGGAGGCGCATCAACAGCAATGGGAGGTGGTGGTCAAGGGCGTGGCCGCGTCACGCGGGCCGGCG
CCGATCGCCCAGACGCTCTATGCGGAGACCGAGGAAAGCCAGGCCAGGCGCCAGACAGACGCGGAACGGCGGCGCTTCCA
GCACGAGCCGGCCGCGCAGATGCACGGGCGACCGACCAAGCGCGACCGGCGCAGAATCGACGGCTTCAAGGGGTGA

Upstream 100 bases:

>100_bases
GAACTGGAAGCGAGACGCTCCCGCGCGCAGGCGCGTGGCGCGGGAGCCTGAGGCCGTAACGGCAGTCACGGGCGGCCACG
GCTAGTAACGGACGGTAATC

Downstream 100 bases:

>100_bases
TGGTTGCGGCTAGCCGGGGCGGGGCGCTCCGGCTGGCCGTAATGTGGCGGGTTAGCGGACGTACTGGACGAGGTAATGCT
TGAATACGGCCTTGCCGCTG

Product: ribosome-associated heat shock protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MQVDFEPDARLRIDKWLWCARFFKTRSLAAEAVERGRVSVNGQPCKNSREVKPGDTVILEAHQQQWEVVVKGVAASRGPA
PIAQTLYAETEESQARRQTDAERRRFQHEPAAQMHGRPTKRDRRRIDGFKG

Sequences:

>Translated_131_residues
MQVDFEPDARLRIDKWLWCARFFKTRSLAAEAVERGRVSVNGQPCKNSREVKPGDTVILEAHQQQWEVVVKGVAASRGPA
PIAQTLYAETEESQARRQTDAERRRFQHEPAAQMHGRPTKRDRRRIDGFKG
>Mature_131_residues
MQVDFEPDARLRIDKWLWCARFFKTRSLAAEAVERGRVSVNGQPCKNSREVKPGDTVILEAHQQQWEVVVKGVAASRGPA
PIAQTLYAETEESQARRQTDAERRRFQHEPAAQMHGRPTKRDRRRIDGFKG

Specific function: May play a important role in binding of nucleic acid. More specific for RNA [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=125, Percent_Identity=40, Blast_Score=88, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15054; Mature: 15054

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVDFEPDARLRIDKWLWCARFFKTRSLAAEAVERGRVSVNGQPCKNSREVKPGDTVILE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC
AHQQQWEVVVKGVAASRGPAPIAQTLYAETEESQARRQTDAERRRFQHEPAAQMHGRPTK
CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCH
RDRRRIDGFKG
HHHHHCCCCCC
>Mature Secondary Structure
MQVDFEPDARLRIDKWLWCARFFKTRSLAAEAVERGRVSVNGQPCKNSREVKPGDTVILE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC
AHQQQWEVVVKGVAASRGPAPIAQTLYAETEESQARRQTDAERRRFQHEPAAQMHGRPTK
CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCH
RDRRRIDGFKG
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]