Click here to switch to the map view.

The map label for this gene is 94309910

Identifier: 94309910

GI number: 94309910

Start: 1049470

End: 1049865

Strand: Reverse

Name: 94309910

Synonym: Rmet_0965

Alternate gene names: NA

Gene position: 1049865-1049470 (Counterclockwise)

Preceding gene: 94309912

Following gene: 94309864

Centisome position: 26.73

GC content: 62.63

Gene sequence:

>396_bases
ATGCACCTTATGACCGGGGATCCACTCAAGCTGTTCGGGCGGCATCTGACCTGGTTGCGCAAGCAGCGCGGCTGGTCTCA
GGAAGCGCTGTCGCTCGAAAGCGGACTCGCGCGATCGTACCTCAGCGGAATCGAACGCGGCACGCGCAATGTTGCGCTGT
ACAACATCTGCACGCTTGCCGACACGCTGGGTGTCGCGCCGAGTGTGATGCTGGATTTCTCCAGTCATTGCGCGGACGCG
CCGGTCGAGCCGGCACGCGCGCCATTCAACCCGGAGATATCACCAGCGGTACAGGCCACGCTGCGCTATATGACGGAACT
CAGCGACACTGACCGCGATGTGGTGGCCGGCGTGGCAAGAGCGCTCGCGCGAAAACAATTGCGCAAGATCGCCTAG

Upstream 100 bases:

>100_bases
AAATGCAGATCTGGCACCGATAGAACGACGAACTATAAGTTGTCGTGATCGACAGGTCAAACCCTTTAGCCTCGGGCGAC
GTAGCGACCTAATATCCACA

Downstream 100 bases:

>100_bases
CCAGCAGCGCGAAGGGATGAGGGGAGGAGCCCGCGTAGCTACACGGCTACACGGCTACACGGCTACACGGCTACACGTCG
AGCATGCCCTGCCGCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MHLMTGDPLKLFGRHLTWLRKQRGWSQEALSLESGLARSYLSGIERGTRNVALYNICTLADTLGVAPSVMLDFSSHCADA
PVEPARAPFNPEISPAVQATLRYMTELSDTDRDVVAGVARALARKQLRKIA

Sequences:

>Translated_131_residues
MHLMTGDPLKLFGRHLTWLRKQRGWSQEALSLESGLARSYLSGIERGTRNVALYNICTLADTLGVAPSVMLDFSSHCADA
PVEPARAPFNPEISPAVQATLRYMTELSDTDRDVVAGVARALARKQLRKIA
>Mature_131_residues
MHLMTGDPLKLFGRHLTWLRKQRGWSQEALSLESGLARSYLSGIERGTRNVALYNICTLADTLGVAPSVMLDFSSHCADA
PVEPARAPFNPEISPAVQATLRYMTELSDTDRDVVAGVARALARKQLRKIA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14409; Mature: 14409

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLMTGDPLKLFGRHLTWLRKQRGWSQEALSLESGLARSYLSGIERGTRNVALYNICTLA
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DTLGVAPSVMLDFSSHCADAPVEPARAPFNPEISPAVQATLRYMTELSDTDRDVVAGVAR
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
ALARKQLRKIA
HHHHHHHHHCC
>Mature Secondary Structure
MHLMTGDPLKLFGRHLTWLRKQRGWSQEALSLESGLARSYLSGIERGTRNVALYNICTLA
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DTLGVAPSVMLDFSSHCADAPVEPARAPFNPEISPAVQATLRYMTELSDTDRDVVAGVAR
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
ALARKQLRKIA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA