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The map label for this gene is amiC [H]

Identifier: 94309897

GI number: 94309897

Start: 1037621

End: 1038880

Strand: Direct

Name: amiC [H]

Synonym: Rmet_0952

Alternate gene names: 94309897

Gene position: 1037621-1038880 (Clockwise)

Preceding gene: 335055511

Following gene: 94309898

Centisome position: 26.42

GC content: 61.9

Gene sequence:

>1260_bases
ATGAAACGACGTGACATGCTGAAGCTGTCGGCGGTGGCCGCCGCGGCGATGATCGGTACCAGCCCGCTGATGGCGCAGAC
CAAGGAGCCGATCAAGGTCGGCATCCTGCATTCGCTATCGGGCACGATGGCCATCTCCGAAACGTCGCTCAAGGACGTGG
CGCTGATGACGATCGACGAGATCAACAAGAGCGGCGGCGTGCTGGGCCGCAAGCTCGAGCCCGTGGTGGTGGACCCCGCT
TCCAACTGGCCGCTCTTCGCGGAGAAGGCGCGTCAGCTCATCACCAAGGACAAGGTGGCGGTCACGTTCGGATGCTGGAC
GTCGGTATCGCGCAAGTCGGTGCTCCCGGTCTATGAGGAAACCAACGCGCTGCTGTTCTACCCGGTGCAGTACGAAGGTG
AGGAGATGTCGAAGAACGTGTTTTACACGGGCGCGGCACCCAACCAGCAGGCGATCCCGGCGGTGGAATACCTGATGAGC
AAGGAGGGCGGCGGTGCGAAGCGCTTCTTCCTGCTGGGTACCGACTACGTCTATCCGCGCACTACCAACAAGATCCTGCG
TGCGTTCCTGAAGAGCAAGGGCGTGGAGGACAAGGACATCGAAGAGGTTTACACCCCGTTCGGTCATAGCGACTACCAGA
CCATCGTCGCCAACATCAAGAAGTTCTCGCAGGGTGGCAAGACCGCCGTGATCTCCACGATCAATGGCGACTCGAACGTG
CCGTTCTACAAGGAACTCGGCAACGCCGGCCTGAAGGCCAAGGACGTGCCGGTGGTGGCCTTCTCGGTGGGCGAGGAAGA
ACTGCGCGGCATCGACACCAAGCCGCTGGTGGGCCATCTGGCTGCATGGAACTACTTCATGTCGGTCAAGAACCCCGAGA
ACGAAGCGTTCAAAAAGCAGTGGGCCGCGTGGGTCAAGGCCAACAACCTGCCGGGCGGCGACAAGCGCGTGACCAACGAC
CCGATGGAAGCTACCTACGTGGGCATCCATATGTGGGCGCAGGCCGTGAAGAAGGCTGGCAGCACCGATCCGGACAAGGT
GCGTGCCGCGATGTACGGCCAGACCTTCAAGGCGCCCGATGGCTTCACGCTGACGATGGGTGACAACCACCATCTCTACA
AGCCCGTGATGATTGGCGAGGTCAAGGGCGACGGCCAGTTCTCGGTGGTGTGGAAGACGCCGAAGCCGGTCCGCGCGCAA
CCGTGGAGCCCGTTCATCGCCGGCAATGAAGGCAAGGCGGACAAGGTGGCGGGGAACTGA

Upstream 100 bases:

>100_bases
ATGGTGACCCGGTCACGCGTGTTTCCCTTGGCACGCTAGTTGCAGATGTGCTCTCCGGGGTGCGTAGTCCCTAATCACAT
ACGACAAACTGGGAGCTGCA

Downstream 100 bases:

>100_bases
CGGTCTGTTGCTCCCACTCCCGTGCTCGGGAGTGGGAGCAAACCACAGGTGAATGCCAACAACCCCAAGATGCGATCCAT
CGCGCGAACCAGGCTCCTGA

Product: ABC-type transporter with twin-arginine translocation pathway signal periplasmic protein: HAAT family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKRRDMLKLSAVAAAAMIGTSPLMAQTKEPIKVGILHSLSGTMAISETSLKDVALMTIDEINKSGGVLGRKLEPVVVDPA
SNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEETNALLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLMS
KEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVEDKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSNV
PFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQWAAWVKANNLPGGDKRVTND
PMEATYVGIHMWAQAVKKAGSTDPDKVRAAMYGQTFKAPDGFTLTMGDNHHLYKPVMIGEVKGDGQFSVVWKTPKPVRAQ
PWSPFIAGNEGKADKVAGN

Sequences:

>Translated_419_residues
MKRRDMLKLSAVAAAAMIGTSPLMAQTKEPIKVGILHSLSGTMAISETSLKDVALMTIDEINKSGGVLGRKLEPVVVDPA
SNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEETNALLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLMS
KEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVEDKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSNV
PFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQWAAWVKANNLPGGDKRVTND
PMEATYVGIHMWAQAVKKAGSTDPDKVRAAMYGQTFKAPDGFTLTMGDNHHLYKPVMIGEVKGDGQFSVVWKTPKPVRAQ
PWSPFIAGNEGKADKVAGN
>Mature_419_residues
MKRRDMLKLSAVAAAAMIGTSPLMAQTKEPIKVGILHSLSGTMAISETSLKDVALMTIDEINKSGGVLGRKLEPVVVDPA
SNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEETNALLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLMS
KEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVEDKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSNV
PFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQWAAWVKANNLPGGDKRVTND
PMEATYVGIHMWAQAVKKAGSTDPDKVRAAMYGQTFKAPDGFTLTMGDNHHLYKPVMIGEVKGDGQFSVVWKTPKPVRAQ
PWSPFIAGNEGKADKVAGN

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45853; Mature: 45853

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRDMLKLSAVAAAAMIGTSPLMAQTKEPIKVGILHSLSGTMAISETSLKDVALMTIDE
CCCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEHHH
INKSGGVLGRKLEPVVVDPASNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEE
HCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEC
TNALLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLMSKEGGGAKRFFLLGTDYVYPR
CCEEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCEECCC
TTNKILRAFLKSKGVEDKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSNV
CHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQ
CHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHEEEEECCCCHHHHHHH
WAAWVKANNLPGGDKRVTNDPMEATYVGIHMWAQAVKKAGSTDPDKVRAAMYGQTFKAPD
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCC
GFTLTMGDNHHLYKPVMIGEVKGDGQFSVVWKTPKPVRAQPWSPFIAGNEGKADKVAGN
CEEEEECCCCEEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MKRRDMLKLSAVAAAAMIGTSPLMAQTKEPIKVGILHSLSGTMAISETSLKDVALMTIDE
CCCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEHHH
INKSGGVLGRKLEPVVVDPASNWPLFAEKARQLITKDKVAVTFGCWTSVSRKSVLPVYEE
HCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEC
TNALLFYPVQYEGEEMSKNVFYTGAAPNQQAIPAVEYLMSKEGGGAKRFFLLGTDYVYPR
CCEEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCEECCC
TTNKILRAFLKSKGVEDKDIEEVYTPFGHSDYQTIVANIKKFSQGGKTAVISTINGDSNV
CHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PFYKELGNAGLKAKDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPENEAFKKQ
CHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHEEEEECCCCHHHHHHH
WAAWVKANNLPGGDKRVTNDPMEATYVGIHMWAQAVKKAGSTDPDKVRAAMYGQTFKAPD
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCC
GFTLTMGDNHHLYKPVMIGEVKGDGQFSVVWKTPKPVRAQPWSPFIAGNEGKADKVAGN
CEEEEECCCCEEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]