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The map label for this gene is nuoJ [H]

Identifier: 94309881

GI number: 94309881

Start: 1021428

End: 1022105

Strand: Direct

Name: nuoJ [H]

Synonym: Rmet_0936

Alternate gene names: 94309881

Gene position: 1021428-1022105 (Clockwise)

Preceding gene: 94309880

Following gene: 94309882

Centisome position: 26.0

GC content: 61.8

Gene sequence:

>678_bases
GTGTGCAAGCGGCCCAAAGAGGATCCGATAGGGACCATGGAACTCACGACCACCATCTTCTATGTCTTTGCCTTGGTGCT
GGTGCTGTCCGCACTGAAAGTCATCACGGCAAAGAACCCGGTGCATTCCGCACTGTTCCTCGTCCTGGCGTTCTTCACCG
CCGCAGCGATCTGGATGATCCTGAAGGCGGAATTCCTCGCCATCCTGCTCCTGCTCGTGTACGTCGGCGCCGTGATGGTG
CTGTTCCTGTTCGTCGTGATGATGATCGACATCGACATCGAGCATCTGCGGCGCGACTTCTGGACCTACGTGCCGATGGC
CTCGATCATTGGCGCGCTGATCATCGCCGAAATGGCGATCGTGCTCGTGCGCAACTTCATCGGCACGACCAACGCCGTGC
TGCCCCCGGGCGCGCAGGATCCGAACTATTCGAATACCGCCGCGCTGGGCAAGCTGATCTACACCGACTACATCTACGCG
TTTGAAGTGGCCGGCATCATCCTGCTGGTGGCCATCATCGCCGCCGTTGCACTGACGCTGCGTCGCCGCAAGGACGTGAA
GGCACAGGACGTTGGCGCCCAGCTGCGCGTGCGTCGCGACGAGCGCGTGCGTCTGGTGAAACTGCCGGCCGAGGGCCGGG
CCGAAGCGGATGCCGCGGCAGCCGCCAACAAGAACTAA

Upstream 100 bases:

>100_bases
CGCTTGAGGCGCCGGCTCCCGAAAGCGAAATTGAATCGGTCCCGCAAGGGGCCAACAGAAGGATGCCGCGAGCACGCGTG
GTCACCCCGAAAGGGGGGCT

Downstream 100 bases:

>100_bases
AGCCCGGAGAAACTGCTGTGCTCTCTCTCGCCCACTTCCTCGTCCTCGGTGCGATCCTGTTTGCGATCAGCATCGTTGGC
ATCTTCCTGAACCGCAAGAA

Product: NADH:ubiquinone oxidoreductase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MCKRPKEDPIGTMELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLAFFTAAAIWMILKAEFLAILLLLVYVGAVMV
LFLFVVMMIDIDIEHLRRDFWTYVPMASIIGALIIAEMAIVLVRNFIGTTNAVLPPGAQDPNYSNTAALGKLIYTDYIYA
FEVAGIILLVAIIAAVALTLRRRKDVKAQDVGAQLRVRRDERVRLVKLPAEGRAEADAAAAANKN

Sequences:

>Translated_225_residues
MCKRPKEDPIGTMELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLAFFTAAAIWMILKAEFLAILLLLVYVGAVMV
LFLFVVMMIDIDIEHLRRDFWTYVPMASIIGALIIAEMAIVLVRNFIGTTNAVLPPGAQDPNYSNTAALGKLIYTDYIYA
FEVAGIILLVAIIAAVALTLRRRKDVKAQDVGAQLRVRRDERVRLVKLPAEGRAEADAAAAANKN
>Mature_225_residues
MCKRPKEDPIGTMELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLAFFTAAAIWMILKAEFLAILLLLVYVGAVMV
LFLFVVMMIDIDIEHLRRDFWTYVPMASIIGALIIAEMAIVLVRNFIGTTNAVLPPGAQDPNYSNTAALGKLIYTDYIYA
FEVAGIILLVAIIAAVALTLRRRKDVKAQDVGAQLRVRRDERVRLVKLPAEGRAEADAAAAANKN

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=185, Percent_Identity=29.1891891891892, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 24764; Mature: 24764

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKRPKEDPIGTMELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLAFFTAAAIWMI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LKAEFLAILLLLVYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMASIIGALIIAEMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVRNFIGTTNAVLPPGAQDPNYSNTAALGKLIYTDYIYAFEVAGIILLVAIIAAVALTL
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRKDVKAQDVGAQLRVRRDERVRLVKLPAEGRAEADAAAAANKN
HHHHCCCHHHCCHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MCKRPKEDPIGTMELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLAFFTAAAIWMI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LKAEFLAILLLLVYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMASIIGALIIAEMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVRNFIGTTNAVLPPGAQDPNYSNTAALGKLIYTDYIYAFEVAGIILLVAIIAAVALTL
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRKDVKAQDVGAQLRVRRDERVRLVKLPAEGRAEADAAAAANKN
HHHHCCCHHHCCHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]