| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94309793
Identifier: 94309793
GI number: 94309793
Start: 928872
End: 929795
Strand: Reverse
Name: 94309793
Synonym: Rmet_0848
Alternate gene names: NA
Gene position: 929795-928872 (Counterclockwise)
Preceding gene: 94309795
Following gene: 335055505
Centisome position: 23.67
GC content: 53.35
Gene sequence:
>924_bases GTGGGCGTCTTCGATCTGTTTTCCAAACGTCAGAAACGTGCTCGCGGCGAAATGCCGGACGTCTACGCTTACGACGAGCT ACCGAATCCGCTGCGAGTTCAGATCGTTCACATTATTAGTGATGCCTTTGGCACTGACAACTACGGCTCTGACCACGCAG GAAAGGCGTACGAGTTTGTAAAGCAAACTCTCTGCCGGGAGTTTGGGGTGTTTGAACTGATCAAGTACCCTAAATCCGAT CAAGAGTCCGTCTTCAATTTCTTCCTGCAGGAGCCGTCTGTTGAGCGTGCATTGGATGTTGTCGAACTGTGCTTCAAGAT CATCCATTCATTCATTCCAGATAACTGGTCGTATCTGAACAACACCCGCCGAAAGCTCGACACTGCCGAGGCAGTTGCTG AACTCAATGAGCGCTTCAAGGAGCATGGAGTCGGCTACCAGTTCGAGTCCGGTGAAATCATCCGCGTCGATTCTGAGTTC CTGCATGCGGAGGCAGTTAAGCCAACGCTAGCGGTGCTGCGTGACAAGGGCTTCCAGGGTGCGAACGAAGAGTTCCTGAA GGCCCACGAGCACTATCGGCACGGGCGCTACAAAGAGTGCCTTGTTGACGCGCTGAAGGCATTTGAGAGCACCATGAAGA CCATTTGCAGTCTGCGTGGTTGGCGGACACAACCAACGGACACGGCGAAGAATCTAATCTCCACCTGCATGAGCAATGGT TTGTTTCCTGCGTACTTCGACTCGCAGTTCTCGTCCATTCGCTCCCTGCTCGAAAGCGGCGTCCCGACCGTACGAAACAA GAACGGTGGCCACGGGCAAGGTACCGACCCTGTTGCTGTGCCCGAATACTTGGCACGGTACACGTTGAACCTCACGGCAA CGACCATCCTATTCATGGTGGAAGCACACCAAACAACGAAATAA
Upstream 100 bases:
>100_bases CAGCAGTCTTGAAAACTGCCGATGGGGTGACCCATCCGTGAGTTCGAATCTCACCGCTTCCGCCATTTCACGAATGTCAC ATAGCCACTGAGGATAGGTT
Downstream 100 bases:
>100_bases GCGACCTACGCGCAGTGCTTGGCTGCCGCCCTGCTCGCAATGGGCTAGAGTGCGGCAAGTCCAACCGACCGAACCACAAG GGCAGCAAAGCAGTTAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGVFDLFSKRQKRARGEMPDVYAYDELPNPLRVQIVHIISDAFGTDNYGSDHAGKAYEFVKQTLCREFGVFELIKYPKSD QESVFNFFLQEPSVERALDVVELCFKIIHSFIPDNWSYLNNTRRKLDTAEAVAELNERFKEHGVGYQFESGEIIRVDSEF LHAEAVKPTLAVLRDKGFQGANEEFLKAHEHYRHGRYKECLVDALKAFESTMKTICSLRGWRTQPTDTAKNLISTCMSNG LFPAYFDSQFSSIRSLLESGVPTVRNKNGGHGQGTDPVAVPEYLARYTLNLTATTILFMVEAHQTTK
Sequences:
>Translated_307_residues MGVFDLFSKRQKRARGEMPDVYAYDELPNPLRVQIVHIISDAFGTDNYGSDHAGKAYEFVKQTLCREFGVFELIKYPKSD QESVFNFFLQEPSVERALDVVELCFKIIHSFIPDNWSYLNNTRRKLDTAEAVAELNERFKEHGVGYQFESGEIIRVDSEF LHAEAVKPTLAVLRDKGFQGANEEFLKAHEHYRHGRYKECLVDALKAFESTMKTICSLRGWRTQPTDTAKNLISTCMSNG LFPAYFDSQFSSIRSLLESGVPTVRNKNGGHGQGTDPVAVPEYLARYTLNLTATTILFMVEAHQTTK >Mature_306_residues GVFDLFSKRQKRARGEMPDVYAYDELPNPLRVQIVHIISDAFGTDNYGSDHAGKAYEFVKQTLCREFGVFELIKYPKSDQ ESVFNFFLQEPSVERALDVVELCFKIIHSFIPDNWSYLNNTRRKLDTAEAVAELNERFKEHGVGYQFESGEIIRVDSEFL HAEAVKPTLAVLRDKGFQGANEEFLKAHEHYRHGRYKECLVDALKAFESTMKTICSLRGWRTQPTDTAKNLISTCMSNGL FPAYFDSQFSSIRSLLESGVPTVRNKNGGHGQGTDPVAVPEYLARYTLNLTATTILFMVEAHQTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34947; Mature: 34816
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVFDLFSKRQKRARGEMPDVYAYDELPNPLRVQIVHIISDAFGTDNYGSDHAGKAYEFV CCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH KQTLCREFGVFELIKYPKSDQESVFNFFLQEPSVERALDVVELCFKIIHSFIPDNWSYLN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NTRRKLDTAEAVAELNERFKEHGVGYQFESGEIIRVDSEFLHAEAVKPTLAVLRDKGFQG HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCC ANEEFLKAHEHYRHGRYKECLVDALKAFESTMKTICSLRGWRTQPTDTAKNLISTCMSNG CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC LFPAYFDSQFSSIRSLLESGVPTVRNKNGGHGQGTDPVAVPEYLARYTLNLTATTILFMV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EAHQTTK HHHCCCC >Mature Secondary Structure GVFDLFSKRQKRARGEMPDVYAYDELPNPLRVQIVHIISDAFGTDNYGSDHAGKAYEFV CHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH KQTLCREFGVFELIKYPKSDQESVFNFFLQEPSVERALDVVELCFKIIHSFIPDNWSYLN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NTRRKLDTAEAVAELNERFKEHGVGYQFESGEIIRVDSEFLHAEAVKPTLAVLRDKGFQG HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCC ANEEFLKAHEHYRHGRYKECLVDALKAFESTMKTICSLRGWRTQPTDTAKNLISTCMSNG CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC LFPAYFDSQFSSIRSLLESGVPTVRNKNGGHGQGTDPVAVPEYLARYTLNLTATTILFMV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EAHQTTK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA