| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94309792
Identifier: 94309792
GI number: 94309792
Start: 927473
End: 928363
Strand: Reverse
Name: 94309792
Synonym: Rmet_0847
Alternate gene names: NA
Gene position: 928363-927473 (Counterclockwise)
Preceding gene: 335055505
Following gene: 94309785
Centisome position: 23.63
GC content: 54.43
Gene sequence:
>891_bases GTGCAAGTCAAAACCATTTCTGAACAGCTCTTCTTCAGCACGGTACGAATCGACACCGTGGCAGCCAATGGCTCGAGCGG CTCCGGCACCGGATTCTTCTTCGGCCACAAGTTCGGAGGAGACAAACAGGCCCTTTTCGTCGTGACGAACAAGCATGTCG TGACGGGCATGCGCGAGGGACGCTTCTCATTCTTAAAGCAGAAGGATGGACAGCCCACGCTGGGTGACGGATTCAATCTG CATATAGGTCAGCAGGATTGGCAGAGTATGTGGTTTGGGCATCCCGATCAAGATGTTGATATTGCCATCTGCCCGCTGGT CCCATTGCTCGAATTCGTGAAGCAACATCACGGAACCGATCTATTTTTCCGTGCCGTGGAAACGAGCATGATTCCCACGC AGCAGCAACTTGCGGAATTGGACGCTGTAGAGCCTGTAACGTTCATCGGTTATCCGAATGGGATCTGGGACAGTAAGAAC CTCCTTCCCGTTGCTCGCCGCGGAACAACTGCAAGCCCCATGGAGGTCGACTTCGAAGGTACTCCCCGGTTTCTAATCGA CGCATCGGTATTCGGCGGCTCTAGCGGCAGTCCCGTCTTCATCCTCAACCAAGGCTCCTTTGCGACGAAAGACGGTGGAC TCGCCATCGGTTCGCGCTTCTACTTTGTCGGAGTCATCGCTGCCGTCTTCTTCCGCACCCATTTGAATCAGATCATCCCC GTGCCGATCCCCACCCAGGTTCAACCAATGGCACAACAGCAAGAGATGATTGACCTTGGCATTGTGTTCAAGGCCGGCAC TGTAGTCGAAACCATTGACGCTTTTCTAAAGGCTCACAACGTCGATACGACGGCACCGCAAGTGGCGGCTGATTTGGCGC CACAAGCATAG
Upstream 100 bases:
>100_bases AAGAAATAGCCCTACCATTCAGACGCATCGCTCGGTGGCAAATCGAGCGATCGAATCCTGACTTACTGCAACTCCACCCT CCCCTAGATAGGAAGTCCGC
Downstream 100 bases:
>100_bases TCACTACAAGCCCCACGCCGGGCCGCCCGTGCCCTAGCCACGGCCCTGTGGTGATCGCGGCCCCAGCCGCCCGCTATCGC CGCGCAGCCACACAAACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MQVKTISEQLFFSTVRIDTVAANGSSGSGTGFFFGHKFGGDKQALFVVTNKHVVTGMREGRFSFLKQKDGQPTLGDGFNL HIGQQDWQSMWFGHPDQDVDIAICPLVPLLEFVKQHHGTDLFFRAVETSMIPTQQQLAELDAVEPVTFIGYPNGIWDSKN LLPVARRGTTASPMEVDFEGTPRFLIDASVFGGSSGSPVFILNQGSFATKDGGLAIGSRFYFVGVIAAVFFRTHLNQIIP VPIPTQVQPMAQQQEMIDLGIVFKAGTVVETIDAFLKAHNVDTTAPQVAADLAPQA
Sequences:
>Translated_296_residues MQVKTISEQLFFSTVRIDTVAANGSSGSGTGFFFGHKFGGDKQALFVVTNKHVVTGMREGRFSFLKQKDGQPTLGDGFNL HIGQQDWQSMWFGHPDQDVDIAICPLVPLLEFVKQHHGTDLFFRAVETSMIPTQQQLAELDAVEPVTFIGYPNGIWDSKN LLPVARRGTTASPMEVDFEGTPRFLIDASVFGGSSGSPVFILNQGSFATKDGGLAIGSRFYFVGVIAAVFFRTHLNQIIP VPIPTQVQPMAQQQEMIDLGIVFKAGTVVETIDAFLKAHNVDTTAPQVAADLAPQA >Mature_296_residues MQVKTISEQLFFSTVRIDTVAANGSSGSGTGFFFGHKFGGDKQALFVVTNKHVVTGMREGRFSFLKQKDGQPTLGDGFNL HIGQQDWQSMWFGHPDQDVDIAICPLVPLLEFVKQHHGTDLFFRAVETSMIPTQQQLAELDAVEPVTFIGYPNGIWDSKN LLPVARRGTTASPMEVDFEGTPRFLIDASVFGGSSGSPVFILNQGSFATKDGGLAIGSRFYFVGVIAAVFFRTHLNQIIP VPIPTQVQPMAQQQEMIDLGIVFKAGTVVETIDAFLKAHNVDTTAPQVAADLAPQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32192; Mature: 32192
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVKTISEQLFFSTVRIDTVAANGSSGSGTGFFFGHKFGGDKQALFVVTNKHVVTGMREG CCCHHHHHHHHHEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCEEEECCCCC RFSFLKQKDGQPTLGDGFNLHIGQQDWQSMWFGHPDQDVDIAICPLVPLLEFVKQHHGTD HHHHHHHCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCC LFFRAVETSMIPTQQQLAELDAVEPVTFIGYPNGIWDSKNLLPVARRGTTASPMEVDFEG EEEHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEECCC TPRFLIDASVFGGSSGSPVFILNQGSFATKDGGLAIGSRFYFVGVIAAVFFRTHLNQIIP CCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHEEC VPIPTQVQPMAQQQEMIDLGIVFKAGTVVETIDAFLKAHNVDTTAPQVAADLAPQA CCCCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MQVKTISEQLFFSTVRIDTVAANGSSGSGTGFFFGHKFGGDKQALFVVTNKHVVTGMREG CCCHHHHHHHHHEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCEEEECCCCC RFSFLKQKDGQPTLGDGFNLHIGQQDWQSMWFGHPDQDVDIAICPLVPLLEFVKQHHGTD HHHHHHHCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCC LFFRAVETSMIPTQQQLAELDAVEPVTFIGYPNGIWDSKNLLPVARRGTTASPMEVDFEG EEEHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCEEEECCC TPRFLIDASVFGGSSGSPVFILNQGSFATKDGGLAIGSRFYFVGVIAAVFFRTHLNQIIP CCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHEEC VPIPTQVQPMAQQQEMIDLGIVFKAGTVVETIDAFLKAHNVDTTAPQVAADLAPQA CCCCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA