| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is bug
Identifier: 94309768
GI number: 94309768
Start: 896582
End: 897559
Strand: Reverse
Name: bug
Synonym: Rmet_0823
Alternate gene names: NA
Gene position: 897559-896582 (Counterclockwise)
Preceding gene: 94309770
Following gene: 94309767
Centisome position: 22.85
GC content: 63.91
Gene sequence:
>978_bases ATGAAAACCTGGCTTCGCCTGTTTGGCGTCGGCCTTGCCACAAGCCTGACCCTGGCTGCTGCCCCGTCGCACGCAGAGAA CTATCCCAGCAAGCCGATCCGGCTGATCGTGCCCTTCCCGGCCAGCGGTGCCACTGACCTGCTGGCGCGCGCCATTGCCC AGAAAGTGGGCACGAGCATGGGCCAGCAGATCGTTGTGGACAACCGGCCCGGCGCCGGCGGCGCGATCGGCTCGGACATG GCGGCCAAGGCGCCCGCCGACGGCTACACACTGCTGATCGCCACGACCAGCACGCACTCGATCGGCCCGTACATCAACAC CCATCTGCCCTACAACACCGAGACGGACTTCACGCCGATCGGCCAGGTGGCCACGGCCACCAACGTGCTGGTGGTGCCGA ACTCGCTGCCGGTGAAGAACGTCAAGGAACTGATCGACTACGCGAAAAAGCATCCGGGCGAATTGAACTACGCATCGAGT GGCAACGGCACGGTCGTGCATCTGACCGCCGAAGCATTCAAGGCCCAGGCCGGTGTGTTCATCACGCATATTCCGTACCG TGGCACGGCGCTGGCGGTGCCTGACCTGATCTCGAACAAGGTGCAGATCCTGTTCGACAGCATCGTGTCCGGCATGCCGC ACGTGAAGAACGGCAAGCTGAAAGGGCTGGCCGTGACCAGCATGAAGCGCTCGCCGCTGGCTCCGGACCTGCCGACGGTC AACGAATCGGGGCTGCCCGGATTCGAATCGGACACGTGGTTCGGTATCTATGGCCCCAAGGGCCTGCCGGCAGATATCGT CAACCGCCTGAATAGCGAGTTCAACAAGGCCATCCAGTCGCAGGACGTCAAGGAGCGCCTGGCCAAGCTCGGCGCCGAGC CCGTTGGCGGCACGCCGGCGCAGTTCGCCGCGATGGTGAAGAAGGACAGCGCCCGCTGGGGCAAGCTGATCAAGGATCGG AAGATCCAGGTGGATTGA
Upstream 100 bases:
>100_bases GGCAAGGAATATTAACTTTCATTATGTCGACCGGCGCGGAATAATTTTGGGTTGCTGCCCAGAAGAGATGTGCCGTACCC ATCCGCACCGGAGAAGAGAA
Downstream 100 bases:
>100_bases TTCTTTGATCCCCAATTTTGCTCTGCTCTCCTGCGCGATGGGAGCGCAGAGAAAACACTAGGCATAGCGAGAGACACCAT GCAGAACTTCAACTGGACCA
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKTWLRLFGVGLATSLTLAAAPSHAENYPSKPIRLIVPFPASGATDLLARAIAQKVGTSMGQQIVVDNRPGAGGAIGSDM AAKAPADGYTLLIATTSTHSIGPYINTHLPYNTETDFTPIGQVATATNVLVVPNSLPVKNVKELIDYAKKHPGELNYASS GNGTVVHLTAEAFKAQAGVFITHIPYRGTALAVPDLISNKVQILFDSIVSGMPHVKNGKLKGLAVTSMKRSPLAPDLPTV NESGLPGFESDTWFGIYGPKGLPADIVNRLNSEFNKAIQSQDVKERLAKLGAEPVGGTPAQFAAMVKKDSARWGKLIKDR KIQVD
Sequences:
>Translated_325_residues MKTWLRLFGVGLATSLTLAAAPSHAENYPSKPIRLIVPFPASGATDLLARAIAQKVGTSMGQQIVVDNRPGAGGAIGSDM AAKAPADGYTLLIATTSTHSIGPYINTHLPYNTETDFTPIGQVATATNVLVVPNSLPVKNVKELIDYAKKHPGELNYASS GNGTVVHLTAEAFKAQAGVFITHIPYRGTALAVPDLISNKVQILFDSIVSGMPHVKNGKLKGLAVTSMKRSPLAPDLPTV NESGLPGFESDTWFGIYGPKGLPADIVNRLNSEFNKAIQSQDVKERLAKLGAEPVGGTPAQFAAMVKKDSARWGKLIKDR KIQVD >Mature_325_residues MKTWLRLFGVGLATSLTLAAAPSHAENYPSKPIRLIVPFPASGATDLLARAIAQKVGTSMGQQIVVDNRPGAGGAIGSDM AAKAPADGYTLLIATTSTHSIGPYINTHLPYNTETDFTPIGQVATATNVLVVPNSLPVKNVKELIDYAKKHPGELNYASS GNGTVVHLTAEAFKAQAGVFITHIPYRGTALAVPDLISNKVQILFDSIVSGMPHVKNGKLKGLAVTSMKRSPLAPDLPTV NESGLPGFESDTWFGIYGPKGLPADIVNRLNSEFNKAIQSQDVKERLAKLGAEPVGGTPAQFAAMVKKDSARWGKLIKDR KIQVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34414; Mature: 34414
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWLRLFGVGLATSLTLAAAPSHAENYPSKPIRLIVPFPASGATDLLARAIAQKVGTSM CCHHHHHHHHHHHHHHHEEECCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC GQQIVVDNRPGAGGAIGSDMAAKAPADGYTLLIATTSTHSIGPYINTHLPYNTETDFTPI CCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCC GQVATATNVLVVPNSLPVKNVKELIDYAKKHPGELNYASSGNGTVVHLTAEAFKAQAGVF CHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHHCCCCEE ITHIPYRGTALAVPDLISNKVQILFDSIVSGMPHVKNGKLKGLAVTSMKRSPLAPDLPTV EEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC NESGLPGFESDTWFGIYGPKGLPADIVNRLNSEFNKAIQSQDVKERLAKLGAEPVGGTPA CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QFAAMVKKDSARWGKLIKDRKIQVD HHHHHHHHCCHHHHHHHHCCCEECC >Mature Secondary Structure MKTWLRLFGVGLATSLTLAAAPSHAENYPSKPIRLIVPFPASGATDLLARAIAQKVGTSM CCHHHHHHHHHHHHHHHEEECCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC GQQIVVDNRPGAGGAIGSDMAAKAPADGYTLLIATTSTHSIGPYINTHLPYNTETDFTPI CCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCC GQVATATNVLVVPNSLPVKNVKELIDYAKKHPGELNYASSGNGTVVHLTAEAFKAQAGVF CHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHHCCCCEE ITHIPYRGTALAVPDLISNKVQILFDSIVSGMPHVKNGKLKGLAVTSMKRSPLAPDLPTV EEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC NESGLPGFESDTWFGIYGPKGLPADIVNRLNSEFNKAIQSQDVKERLAKLGAEPVGGTPA CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QFAAMVKKDSARWGKLIKDRKIQVD HHHHHHHHCCHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]