| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is phnK [H]
Identifier: 94309707
GI number: 94309707
Start: 840383
End: 841159
Strand: Reverse
Name: phnK [H]
Synonym: Rmet_0762
Alternate gene names: 94309707
Gene position: 841159-840383 (Counterclockwise)
Preceding gene: 94309708
Following gene: 94309706
Centisome position: 21.41
GC content: 66.8
Gene sequence:
>777_bases ATGAACGCGACGCCTCTGCTCTCCGTACGCAACCTGACGCACACCTGGGACGGCGTGCATGGTTGCCACGATGTCAACTT CGATCTCTATCCGGGCGAAGTGCTCTGCGTGGTCGGTGAATCGGGCTCGGGCAAGAGCACGCTGCTGCAAGCCCTGTCGA TGCAGGTCAAGGCGCAGCGCGGCAGCGTCAGCTACGACATGCGCGAATCGGGGCTGACCGATCTGGCTGGACTGTCGAGC GCGCGGATGCGTCTGCTGGCCCGCACGGACTGGGGCTTCGTGCGGCAGCACGCCCGCGATGGCCTGCGGATGCAGGTGAG CGCCGGCGCCAATATCGCCGAGCGCCTGATGGCCGTCGGCAATCGCCACTACGGTGACCTGCGCGAGATCGCCGGCGCCT GGCTCGAGAAAATGGAGATCGACCTCTCCCGGCTGGACGATGTGCCGACCACGTTCTCGGGCGGGATGCAGCAGCGTCTG CAGATCGCACGCAACCTGGTCACCCATCCACGCCTGGTGTTCATGGACGAGCCGACCGCATCGCTCGATGTCTCCGTGCA GGCCCGGCTGCTCGACCTGATGCGCCGCCTGGTCACCGACCTGGGCCTGGCCGCGATCCTTGTCACGCACGACCTGGCCG TGGCGCGCCTGCTCGCGCACCGCACGCTGGTCATGCAGGGCGGCCGCGTGGTCGAACAGGGCCTGACCGATCAGATCCTC GATGACCCGCAGCATCCGTACACGCAGTTGCTGGTCTCCTCCATCCTGCAGGGATGA
Upstream 100 bases:
>100_bases CCGACGATGCCGGCACGCGCATGTTCGTGTGCTCGGACACCGAGTACTGCGCCGACCGCCAGGCCGCGCAGGCTATGAAG CAGGCCGCAGGAGGTGCCCA
Downstream 100 bases:
>100_bases TCATGATGCAAGCCAACAACCAGAAACTGATTGAGGTCCGCGGCCTCGGCAAGATGTTCACGTTGCACAACCAGGGCGGC ATTCGCCTGCCCGTGCTGCG
Product: phosphonate C-P lyase system protein PhnK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNATPLLSVRNLTHTWDGVHGCHDVNFDLYPGEVLCVVGESGSGKSTLLQALSMQVKAQRGSVSYDMRESGLTDLAGLSS ARMRLLARTDWGFVRQHARDGLRMQVSAGANIAERLMAVGNRHYGDLREIAGAWLEKMEIDLSRLDDVPTTFSGGMQQRL QIARNLVTHPRLVFMDEPTASLDVSVQARLLDLMRRLVTDLGLAAILVTHDLAVARLLAHRTLVMQGGRVVEQGLTDQIL DDPQHPYTQLLVSSILQG
Sequences:
>Translated_258_residues MNATPLLSVRNLTHTWDGVHGCHDVNFDLYPGEVLCVVGESGSGKSTLLQALSMQVKAQRGSVSYDMRESGLTDLAGLSS ARMRLLARTDWGFVRQHARDGLRMQVSAGANIAERLMAVGNRHYGDLREIAGAWLEKMEIDLSRLDDVPTTFSGGMQQRL QIARNLVTHPRLVFMDEPTASLDVSVQARLLDLMRRLVTDLGLAAILVTHDLAVARLLAHRTLVMQGGRVVEQGLTDQIL DDPQHPYTQLLVSSILQG >Mature_258_residues MNATPLLSVRNLTHTWDGVHGCHDVNFDLYPGEVLCVVGESGSGKSTLLQALSMQVKAQRGSVSYDMRESGLTDLAGLSS ARMRLLARTDWGFVRQHARDGLRMQVSAGANIAERLMAVGNRHYGDLREIAGAWLEKMEIDLSRLDDVPTTFSGGMQQRL QIARNLVTHPRLVFMDEPTASLDVSVQARLLDLMRRLVTDLGLAAILVTHDLAVARLLAHRTLVMQGGRVVEQGLTDQIL DDPQHPYTQLLVSSILQG
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9961250, Length=229, Percent_Identity=28.82096069869, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4505771, Length=228, Percent_Identity=28.5087719298246, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9961252, Length=228, Percent_Identity=28.5087719298246, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI150417984, Length=243, Percent_Identity=27.5720164609054, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI42741659, Length=234, Percent_Identity=28.6324786324786, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI48994997, Length=253, Percent_Identity=66.0079051383399, Blast_Score=332, Evalue=2e-92, Organism=Escherichia coli, GI145693107, Length=266, Percent_Identity=33.4586466165414, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1787500, Length=232, Percent_Identity=37.5, Blast_Score=141, Evalue=3e-35, Organism=Escherichia coli, GI1789962, Length=249, Percent_Identity=35.7429718875502, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1788506, Length=260, Percent_Identity=36.5384615384615, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI48994883, Length=259, Percent_Identity=34.3629343629344, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1787758, Length=244, Percent_Identity=33.1967213114754, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1789963, Length=233, Percent_Identity=34.7639484978541, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788225, Length=256, Percent_Identity=31.640625, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1787759, Length=263, Percent_Identity=31.5589353612167, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1789672, Length=254, Percent_Identity=27.9527559055118, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87081791, Length=262, Percent_Identity=30.1526717557252, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1786872, Length=220, Percent_Identity=32.7272727272727, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787029, Length=248, Percent_Identity=28.2258064516129, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=34.5971563981043, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1786398, Length=255, Percent_Identity=26.2745098039216, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=239, Percent_Identity=31.7991631799163, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787548, Length=265, Percent_Identity=28.6792452830189, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1789864, Length=255, Percent_Identity=28.2352941176471, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1788761, Length=239, Percent_Identity=28.0334728033473, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1789890, Length=239, Percent_Identity=31.7991631799163, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1789032, Length=235, Percent_Identity=28.0851063829787, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787547, Length=265, Percent_Identity=28.6792452830189, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789891, Length=241, Percent_Identity=29.4605809128631, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787370, Length=255, Percent_Identity=26.2745098039216, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788644, Length=247, Percent_Identity=29.9595141700405, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787105, Length=233, Percent_Identity=32.1888412017167, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790525, Length=246, Percent_Identity=26.8292682926829, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=29.8701298701299, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790162, Length=255, Percent_Identity=27.0588235294118, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788210, Length=240, Percent_Identity=27.9166666666667, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1786345, Length=241, Percent_Identity=27.3858921161826, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1786563, Length=231, Percent_Identity=29.8701298701299, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786703, Length=190, Percent_Identity=35.7894736842105, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787712, Length=254, Percent_Identity=25.9842519685039, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790190, Length=213, Percent_Identity=26.7605633802817, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789873, Length=204, Percent_Identity=29.9019607843137, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788450, Length=246, Percent_Identity=28.4552845528455, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87082267, Length=252, Percent_Identity=25, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788897, Length=235, Percent_Identity=28.936170212766, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI87081709, Length=245, Percent_Identity=24.4897959183673, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1790544, Length=250, Percent_Identity=27.6, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1789991, Length=217, Percent_Identity=26.7281105990783, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787164, Length=235, Percent_Identity=30.2127659574468, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786319, Length=236, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790534, Length=197, Percent_Identity=31.9796954314721, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87082268, Length=236, Percent_Identity=26.271186440678, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787792, Length=241, Percent_Identity=27.3858921161826, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1790739, Length=242, Percent_Identity=31.404958677686, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786253, Length=227, Percent_Identity=26.431718061674, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789593, Length=243, Percent_Identity=27.1604938271605, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1787112, Length=249, Percent_Identity=27.3092369477912, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788002, Length=226, Percent_Identity=27.8761061946903, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786981, Length=248, Percent_Identity=29.0322580645161, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71996809, Length=225, Percent_Identity=30.2222222222222, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193211015, Length=225, Percent_Identity=30.2222222222222, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193211017, Length=225, Percent_Identity=30.2222222222222, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115533608, Length=235, Percent_Identity=25.531914893617, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71984940, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17558664, Length=243, Percent_Identity=28.8065843621399, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193202349, Length=233, Percent_Identity=25.7510729613734, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI85726357, Length=239, Percent_Identity=25.9414225941423, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641565, Length=225, Percent_Identity=28, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI17136662, Length=227, Percent_Identity=28.6343612334802, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 28388; Mature: 28388
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATPLLSVRNLTHTWDGVHGCHDVNFDLYPGEVLCVVGESGSGKSTLLQALSMQVKAQR CCCCCCCHHHCCHHHCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GSVSYDMRESGLTDLAGLSSARMRLLARTDWGFVRQHARDGLRMQVSAGANIAERLMAVG CCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHC NRHYGDLREIAGAWLEKMEIDLSRLDDVPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCEEEEEECCCC SLDVSVQARLLDLMRRLVTDLGLAAILVTHDLAVARLLAHRTLVMQGGRVVEQGLTDQIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHH DDPQHPYTQLLVSSILQG CCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNATPLLSVRNLTHTWDGVHGCHDVNFDLYPGEVLCVVGESGSGKSTLLQALSMQVKAQR CCCCCCCHHHCCHHHCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GSVSYDMRESGLTDLAGLSSARMRLLARTDWGFVRQHARDGLRMQVSAGANIAERLMAVG CCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHC NRHYGDLREIAGAWLEKMEIDLSRLDDVPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCEEEEEECCCC SLDVSVQARLLDLMRRLVTDLGLAAILVTHDLAVARLLAHRTLVMQGGRVVEQGLTDQIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHH DDPQHPYTQLLVSSILQG CCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]