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The map label for this gene is phnM [H]

Identifier: 94309705

GI number: 94309705

Start: 838436

End: 839662

Strand: Reverse

Name: phnM [H]

Synonym: Rmet_0760

Alternate gene names: 94309705

Gene position: 839662-838436 (Counterclockwise)

Preceding gene: 94309706

Following gene: 94309704

Centisome position: 21.38

GC content: 67.24

Gene sequence:

>1227_bases
TTGCCTGAACCTGAACTGGAACCGGACATGTCTACCACCTACCTCACGCACGCGACGCTGGTACTGCCGGATCGCGTCCT
GCACGACAGCGCGATGCTGATCGCCGACGGCCAGATCGCCGCCATCGAGCCAGCCTCCGCCCCAGCCGACGCCGAGGTCA
TCAACCTGCGCGGCCACACCGTGATGCCCGGGCTTATCGACGTCCACTGCGACGCGATCGAAAAGGAAGCCGAGCCCCGC
GCCAATGTGCTGTTTCCGCTCGACTTCGCGGTGGCGCAGGTTGACCGCCGCAATGCCGCAGCTGGCATCACCACGCCGTA
CCACGCGTTGTCGTTCGCCAGCAACCAGTTCGGCGTACGCAACAACGAGACCGCCGCGACGCTGGTGCGTACCGTGGCCG
CGTATCGCGCGCACAGCCTCGTCGACAATCGCATCCACTGCCGCTATGAAGTCACCGATAACGCCGCCGTGCCAGTGCTC
GAGATGCTGATGGCCGAAGGCGTGGTCGACCTGCTGTCGGTCATGGACCACTCGCCGGGCCAGGGTCAGTTCAAAACGCT
CGATGCTTACCTGTCGTACATGATGGGCAATCACGGCATGAGCCGCGAGGAAGCCGCCGACGCGGCTGCGAAGAAATCGG
CTGAGTTGGCCGGCGCAACCGAGCGCGTCAACCGTCTGGTCTCGAAGGCGCACGAACTCGGCATCCCCACCGCCAGCCAC
GACGACGACTCTCCGCAACGCATCGCCGCAATGCACGCGCTGGGGGTTCGCATGAGCGAGTTTCCGATCAACGTGGAGAC
GGCGCAGGCCGCCTCGGCCCACGCGCTCCCGACGATCCTCGGCGCGCCGAACGTGCTGCGCGGCAAGAGCCAGAGCGGTT
CGATGCGTGCGATCGATGCGATTCACGCCGGCGTCGGCCACATCCTCTGCTCGGACTACCAGCCGTCCACACTGATCGCG
GCGGCATTCGCCGCCTCACGCCTCGCCGACCTTCCGCTCGACCGGGCGCTGGCACTGGTCACGTCCAATCCGGCAGATGC
CTGCCTGCTGGACGATCGCGGCCGGCTGGCGCCGGGCAAGCGTGCCGACGTCATCGCCGTGGGCAGCGTTGCCGGGCAGC
CGCTGGTCACCCATACGTGGTCGGCCGGGCGTCTGGTGTTCGCGGCGGGATATCCGATGGTGCAGCCTGCTGCGCCGCGT
GCCGCCGAGATGCGAGCGGTGGCTTGA

Upstream 100 bases:

>100_bases
GCGCTGGCCGAAGGCCGCTCGCTGATCGGCATCTTCCACGACGAGGCTGTGCGCGATGCGGTGGCCACGCGCATGCTGCC
GCTGCAGCCGGCCACGGCGC

Downstream 100 bases:

>100_bases
AATGTGATCGGCCAATGCGAGGCCTCGCCCTCTCTCCCGACCTCTCCTCCGGCCTCGCTCCCGCAGGCGGGAGAGAGGCC
GGGGGCGATGGCGGGTGCCC

Product: phosphonate metabolism protein PhnM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPEPELEPDMSTTYLTHATLVLPDRVLHDSAMLIADGQIAAIEPASAPADAEVINLRGHTVMPGLIDVHCDAIEKEAEPR
ANVLFPLDFAVAQVDRRNAAAGITTPYHALSFASNQFGVRNNETAATLVRTVAAYRAHSLVDNRIHCRYEVTDNAAVPVL
EMLMAEGVVDLLSVMDHSPGQGQFKTLDAYLSYMMGNHGMSREEAADAAAKKSAELAGATERVNRLVSKAHELGIPTASH
DDDSPQRIAAMHALGVRMSEFPINVETAQAASAHALPTILGAPNVLRGKSQSGSMRAIDAIHAGVGHILCSDYQPSTLIA
AAFAASRLADLPLDRALALVTSNPADACLLDDRGRLAPGKRADVIAVGSVAGQPLVTHTWSAGRLVFAAGYPMVQPAAPR
AAEMRAVA

Sequences:

>Translated_408_residues
MPEPELEPDMSTTYLTHATLVLPDRVLHDSAMLIADGQIAAIEPASAPADAEVINLRGHTVMPGLIDVHCDAIEKEAEPR
ANVLFPLDFAVAQVDRRNAAAGITTPYHALSFASNQFGVRNNETAATLVRTVAAYRAHSLVDNRIHCRYEVTDNAAVPVL
EMLMAEGVVDLLSVMDHSPGQGQFKTLDAYLSYMMGNHGMSREEAADAAAKKSAELAGATERVNRLVSKAHELGIPTASH
DDDSPQRIAAMHALGVRMSEFPINVETAQAASAHALPTILGAPNVLRGKSQSGSMRAIDAIHAGVGHILCSDYQPSTLIA
AAFAASRLADLPLDRALALVTSNPADACLLDDRGRLAPGKRADVIAVGSVAGQPLVTHTWSAGRLVFAAGYPMVQPAAPR
AAEMRAVA
>Mature_407_residues
PEPELEPDMSTTYLTHATLVLPDRVLHDSAMLIADGQIAAIEPASAPADAEVINLRGHTVMPGLIDVHCDAIEKEAEPRA
NVLFPLDFAVAQVDRRNAAAGITTPYHALSFASNQFGVRNNETAATLVRTVAAYRAHSLVDNRIHCRYEVTDNAAVPVLE
MLMAEGVVDLLSVMDHSPGQGQFKTLDAYLSYMMGNHGMSREEAADAAAKKSAELAGATERVNRLVSKAHELGIPTASHD
DDSPQRIAAMHALGVRMSEFPINVETAQAASAHALPTILGAPNVLRGKSQSGSMRAIDAIHAGVGHILCSDYQPSTLIAA
AFAASRLADLPLDRALALVTSNPADACLLDDRGRLAPGKRADVIAVGSVAGQPLVTHTWSAGRLVFAAGYPMVQPAAPRA
AEMRAVA

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=382, Percent_Identity=32.1989528795811, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 43112; Mature: 42981

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPELEPDMSTTYLTHATLVLPDRVLHDSAMLIADGQIAAIEPASAPADAEVINLRGHT
CCCCCCCCCCCCEEEEEEEEECCHHHHCCCEEEEECCCEEEECCCCCCCCCEEEEECCCE
VMPGLIDVHCDAIEKEAEPRANVLFPLDFAVAQVDRRNAAAGITTPYHALSFASNQFGVR
ECCCHHEEHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
NNETAATLVRTVAAYRAHSLVDNRIHCRYEVTDNAAVPVLEMLMAEGVVDLLSVMDHSPG
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
QGQFKTLDAYLSYMMGNHGMSREEAADAAAKKSAELAGATERVNRLVSKAHELGIPTASH
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
DDDSPQRIAAMHALGVRMSEFPINVETAQAASAHALPTILGAPNVLRGKSQSGSMRAIDA
CCCCHHHHHHHHHHCCCHHHCCCCCCHHCCCCHHCCHHHHCCCHHHCCCCCCCCCHHHHH
IHAGVGHILCSDYQPSTLIAAAFAASRLADLPLDRALALVTSNPADACLLDDRGRLAPGK
HHHCHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCEEEECCCCCCCCCC
RADVIAVGSVAGQPLVTHTWSAGRLVFAAGYPMVQPAAPRAAEMRAVA
CCCEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
PEPELEPDMSTTYLTHATLVLPDRVLHDSAMLIADGQIAAIEPASAPADAEVINLRGHT
CCCCCCCCCCCEEEEEEEEECCHHHHCCCEEEEECCCEEEECCCCCCCCCEEEEECCCE
VMPGLIDVHCDAIEKEAEPRANVLFPLDFAVAQVDRRNAAAGITTPYHALSFASNQFGVR
ECCCHHEEHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
NNETAATLVRTVAAYRAHSLVDNRIHCRYEVTDNAAVPVLEMLMAEGVVDLLSVMDHSPG
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
QGQFKTLDAYLSYMMGNHGMSREEAADAAAKKSAELAGATERVNRLVSKAHELGIPTASH
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
DDDSPQRIAAMHALGVRMSEFPINVETAQAASAHALPTILGAPNVLRGKSQSGSMRAIDA
CCCCHHHHHHHHHHCCCHHHCCCCCCHHCCCCHHCCHHHHCCCHHHCCCCCCCCCHHHHH
IHAGVGHILCSDYQPSTLIAAAFAASRLADLPLDRALALVTSNPADACLLDDRGRLAPGK
HHHCHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCEEEECCCCCCCCCC
RADVIAVGSVAGQPLVTHTWSAGRLVFAAGYPMVQPAAPRAAEMRAVA
CCCEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]