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The map label for this gene is cpaB1

Identifier: 94309593

GI number: 94309593

Start: 715009

End: 715854

Strand: Reverse

Name: cpaB1

Synonym: Rmet_0648

Alternate gene names: NA

Gene position: 715854-715009 (Counterclockwise)

Preceding gene: 94309594

Following gene: 94309592

Centisome position: 18.22

GC content: 67.26

Gene sequence:

>846_bases
ATGAAGAACACGCGAGCAATCCTGATGCTGCTGATTGCGCTGGTGGCCGGCGCGGCGGCGGTGGTTTCCGCATCCCGCTG
GCTGCTGCAGCAGTCGTCCAGCTCGGTCAAGCAGGTGGTGGTGGCCGCGAACGATCTCGATCTCGGCCAGCCGCTCAATG
GCAGCCAGCTCAAGCTCGTCAGCTGGCCCGCCGGCAGCGTGCCGCCCGGTGCGTTCGAAGATCCCAAGACGCTGGACGGG
CGCGTGGTCCGCACCAGCTTGCAACGCGGCGAGCCCATTATCGACGCGAAGCTGGCGCCGGTGGGCACCAAGGGCGGCCT
CTCCGCCGTCATCAACGACGGCAAGCGCGCCATCACGGTTCGTGTCAACGATGTGGTGGGCGTGGCTGGCTTCGCGCTGC
CAGGCAACTACGTCGATGTGATCGTCAACACCAACGAGGACACCAAGAGCGCGCAGAACGGCAGCATCTCGAAGATCGTG
CTCGAGAAGATTCTGGTGCTGGCCGTGGCGCAACAGGTCAGCCGCGATGACACGCAGCCGAAGGTGGTCAACGCCGTGAC
GCTGGAAGTCTCGCCGGATCAGGCCGAGAAGCTCGACGTGGCGCGCAGCGTGGGAACGCTGTCGCTGGTGCTGCGCAATC
AGATGGACGTGGCCGACATCAACACGGGCGGCGCCACCAAGCACACGCTGCTCGGCAAGGCCGAACTGCCCGCGCCGGCT
CCGCTCGCTGCGCCGGCTCCCGTTACGCGCACGGTGGTCAAGACCCGCACGGTCGCCGCCGCACCGCGCGCTGGCAACTG
CGTCGGCGTGCTCGCAGGCATCCAGGGCAGCCTGGAGTGCTTCTGA

Upstream 100 bases:

>100_bases
CACCACCGCCGGACAACGAACACCGCTGGCCCGCCGGCCATCGTGCAGCGGGCTGAGTCAGCCCAACCAGGAAGCAAGTA
CATACGAGGGGAGAGTCATC

Downstream 100 bases:

>100_bases
CCGTAAAGGGTGAAACAGCCGAAGCACCGAGACACCTAGACGCTTAGCGCATCCAGATCCGCTTCACTCTCCGGGGGGAG
ATCAAAAATGAACCAGAAGA

Product: Flp pilus assembly CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly CpaB Domain Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; CtpC Protein; Pilus Assembly-Related Exported Protein; Pilus Assembly Domain-Containing Protein; Flp Pilus Assembly Protein Cpab; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB Family Flp Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKNTRAILMLLIALVAGAAAVVSASRWLLQQSSSSVKQVVVAANDLDLGQPLNGSQLKLVSWPAGSVPPGAFEDPKTLDG
RVVRTSLQRGEPIIDAKLAPVGTKGGLSAVINDGKRAITVRVNDVVGVAGFALPGNYVDVIVNTNEDTKSAQNGSISKIV
LEKILVLAVAQQVSRDDTQPKVVNAVTLEVSPDQAEKLDVARSVGTLSLVLRNQMDVADINTGGATKHTLLGKAELPAPA
PLAAPAPVTRTVVKTRTVAAAPRAGNCVGVLAGIQGSLECF

Sequences:

>Translated_281_residues
MKNTRAILMLLIALVAGAAAVVSASRWLLQQSSSSVKQVVVAANDLDLGQPLNGSQLKLVSWPAGSVPPGAFEDPKTLDG
RVVRTSLQRGEPIIDAKLAPVGTKGGLSAVINDGKRAITVRVNDVVGVAGFALPGNYVDVIVNTNEDTKSAQNGSISKIV
LEKILVLAVAQQVSRDDTQPKVVNAVTLEVSPDQAEKLDVARSVGTLSLVLRNQMDVADINTGGATKHTLLGKAELPAPA
PLAAPAPVTRTVVKTRTVAAAPRAGNCVGVLAGIQGSLECF
>Mature_281_residues
MKNTRAILMLLIALVAGAAAVVSASRWLLQQSSSSVKQVVVAANDLDLGQPLNGSQLKLVSWPAGSVPPGAFEDPKTLDG
RVVRTSLQRGEPIIDAKLAPVGTKGGLSAVINDGKRAITVRVNDVVGVAGFALPGNYVDVIVNTNEDTKSAQNGSISKIV
LEKILVLAVAQQVSRDDTQPKVVNAVTLEVSPDQAEKLDVARSVGTLSLVLRNQMDVADINTGGATKHTLLGKAELPAPA
PLAAPAPVTRTVVKTRTVAAAPRAGNCVGVLAGIQGSLECF

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29011; Mature: 29011

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTRAILMLLIALVAGAAAVVSASRWLLQQSSSSVKQVVVAANDLDLGQPLNGSQLKLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCEEEEE
SWPAGSVPPGAFEDPKTLDGRVVRTSLQRGEPIIDAKLAPVGTKGGLSAVINDGKRAITV
ECCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCEEEEEECCCCCCCCHHHEECCCCEEEEE
RVNDVVGVAGFALPGNYVDVIVNTNEDTKSAQNGSISKIVLEKILVLAVAQQVSRDDTQP
EEECEEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
KVVNAVTLEVSPDQAEKLDVARSVGTLSLVLRNQMDVADINTGGATKHTLLGKAELPAPA
EEEEEEEEEECCCHHHHHHHHHHHHHHEEEHHCCCCEEECCCCCCCCEEEECCCCCCCCC
PLAAPAPVTRTVVKTRTVAAAPRAGNCVGVLAGIQGSLECF
CCCCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKNTRAILMLLIALVAGAAAVVSASRWLLQQSSSSVKQVVVAANDLDLGQPLNGSQLKLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCEEEEE
SWPAGSVPPGAFEDPKTLDGRVVRTSLQRGEPIIDAKLAPVGTKGGLSAVINDGKRAITV
ECCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCEEEEEECCCCCCCCHHHEECCCCEEEEE
RVNDVVGVAGFALPGNYVDVIVNTNEDTKSAQNGSISKIVLEKILVLAVAQQVSRDDTQP
EEECEEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
KVVNAVTLEVSPDQAEKLDVARSVGTLSLVLRNQMDVADINTGGATKHTLLGKAELPAPA
EEEEEEEEEECCCHHHHHHHHHHHHHHEEEHHCCCCEEECCCCCCCCEEEECCCCCCCCC
PLAAPAPVTRTVVKTRTVAAAPRAGNCVGVLAGIQGSLECF
CCCCCCCHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA