| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309538
Identifier: 94309538
GI number: 94309538
Start: 640023
End: 640901
Strand: Direct
Name: 94309538
Synonym: Rmet_0593
Alternate gene names: NA
Gene position: 640023-640901 (Clockwise)
Preceding gene: 94309537
Following gene: 94309539
Centisome position: 16.29
GC content: 65.87
Gene sequence:
>879_bases ATGGACGTCAAACGTTTCTACCGGATTGCCAGTTCGGCGGCGGTCGCATTCATCGTATTCGTGGTGATCGCGGTGGGCAG CACGTACTGGTGGGGCGGGCGCAAGCTCGTGCGCAAGATCGACGTGGCGGTGCAGCCGGTGACCTTCCCGACGGATGCCG GGGCGGTTGAGCACGGCAAGTACCTCTACGAATCGCGCGGATGCATGGATTGCCACGGTGCCAACGGCGCGGGCAAACAG GTGTTTGACGAAGCCAATGGCCTGCGCGTGCGTGCTCCCGACATCACGCGGGGCAACTCCGACATCGAAAAATATCAGCT GCGTGACTGGGATCTGGCGATCCGTCACGGCGTGGCGCCTTCCGGGCGTCCGCTGCTGATCATGCCGAGTGAGGACTACA ACCGGCTTTCCGATAGCGACTTCGGGGCGCTCGTTGCCTACGTCCGCAGCCTTCCTGCCGGGGGCGGCCAGCCGGCCGAC ATCCGTCTGCCGTGGTTCATCCAGGGCCTGTACGGCGCCGGGGTGGTCAAGGATGCGGCCGAGAAGATCGACCACAGCCT GCCACCGTCGCCACCGATCGCGGCTGCCGTGAATGCGCAGTACGGCGCCTACGTCGCCAATTCCTGCAAGGGGTGCCACG GCGCCACGCTGCGTGGCGGTAACATCCCCGGGGCGCCGCCCGACTGGCCGGCCGCCGCCGACCTGCGCCCGTCCGGCGCG ATGAAGACGTATCCGCAGGCGGACCAGTTCGTCGCCATGATGCGCAGCGGCAAACGGCCCGATGGCAGCGAGGTGAGCCG CGTGATGCCGTTCGGCGCGTTCGCGAAGATGAACGATACCGATCTCAATGCGCTGTATCTGTTCCTCGCCGGGAAATAA
Upstream 100 bases:
>100_bases CCCCCACTCGCCACCATCCCGCTTCGTCTGTACCATCGCGCACGGAACATCCGGCACGCAGCCGCTCCAATCAGCCCGGC GGCTTCAGAGGGGGGTACCG
Downstream 100 bases:
>100_bases TCCCGCTTTCGGTGCGCGCTGCCCGGTGTGAGCGGCGCTGCGCAAGTTTTTTCCGTTTGCACTATGCTCCTCGGGTCTGC CGGCCTGGCCAGCCCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Di-Heme Cytochrome C-Signal Peptide; Diheme Cytochrome C-Type
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDVKRFYRIASSAAVAFIVFVVIAVGSTYWWGGRKLVRKIDVAVQPVTFPTDAGAVEHGKYLYESRGCMDCHGANGAGKQ VFDEANGLRVRAPDITRGNSDIEKYQLRDWDLAIRHGVAPSGRPLLIMPSEDYNRLSDSDFGALVAYVRSLPAGGGQPAD IRLPWFIQGLYGAGVVKDAAEKIDHSLPPSPPIAAAVNAQYGAYVANSCKGCHGATLRGGNIPGAPPDWPAAADLRPSGA MKTYPQADQFVAMMRSGKRPDGSEVSRVMPFGAFAKMNDTDLNALYLFLAGK
Sequences:
>Translated_292_residues MDVKRFYRIASSAAVAFIVFVVIAVGSTYWWGGRKLVRKIDVAVQPVTFPTDAGAVEHGKYLYESRGCMDCHGANGAGKQ VFDEANGLRVRAPDITRGNSDIEKYQLRDWDLAIRHGVAPSGRPLLIMPSEDYNRLSDSDFGALVAYVRSLPAGGGQPAD IRLPWFIQGLYGAGVVKDAAEKIDHSLPPSPPIAAAVNAQYGAYVANSCKGCHGATLRGGNIPGAPPDWPAAADLRPSGA MKTYPQADQFVAMMRSGKRPDGSEVSRVMPFGAFAKMNDTDLNALYLFLAGK >Mature_292_residues MDVKRFYRIASSAAVAFIVFVVIAVGSTYWWGGRKLVRKIDVAVQPVTFPTDAGAVEHGKYLYESRGCMDCHGANGAGKQ VFDEANGLRVRAPDITRGNSDIEKYQLRDWDLAIRHGVAPSGRPLLIMPSEDYNRLSDSDFGALVAYVRSLPAGGGQPAD IRLPWFIQGLYGAGVVKDAAEKIDHSLPPSPPIAAAVNAQYGAYVANSCKGCHGATLRGGNIPGAPPDWPAAADLRPSGA MKTYPQADQFVAMMRSGKRPDGSEVSRVMPFGAFAKMNDTDLNALYLFLAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31350; Mature: 31350
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKRFYRIASSAAVAFIVFVVIAVGSTYWWGGRKLVRKIDVAVQPVTFPTDAGAVEHGK CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHEEECEECCCCCCCHHHCH YLYESRGCMDCHGANGAGKQVFDEANGLRVRAPDITRGNSDIEKYQLRDWDLAIRHGVAP HHHHCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHCCCCC SGRPLLIMPSEDYNRLSDSDFGALVAYVRSLPAGGGQPADIRLPWFIQGLYGAGVVKDAA CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHCCCHHHHHH EKIDHSLPPSPPIAAAVNAQYGAYVANSCKGCHGATLRGGNIPGAPPDWPAAADLRPSGA HHHHCCCCCCCCCEEEECCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC MKTYPQADQFVAMMRSGKRPDGSEVSRVMPFGAFAKMNDTDLNALYLFLAGK CCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MDVKRFYRIASSAAVAFIVFVVIAVGSTYWWGGRKLVRKIDVAVQPVTFPTDAGAVEHGK CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHEEECEECCCCCCCHHHCH YLYESRGCMDCHGANGAGKQVFDEANGLRVRAPDITRGNSDIEKYQLRDWDLAIRHGVAP HHHHCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHCCCCC SGRPLLIMPSEDYNRLSDSDFGALVAYVRSLPAGGGQPADIRLPWFIQGLYGAGVVKDAA CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHCCCHHHHHH EKIDHSLPPSPPIAAAVNAQYGAYVANSCKGCHGATLRGGNIPGAPPDWPAAADLRPSGA HHHHCCCCCCCCCEEEECCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC MKTYPQADQFVAMMRSGKRPDGSEVSRVMPFGAFAKMNDTDLNALYLFLAGK CCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA