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The map label for this gene is pqiA1 [H]

Identifier: 94309525

GI number: 94309525

Start: 621745

End: 622494

Strand: Reverse

Name: pqiA1 [H]

Synonym: Rmet_0580

Alternate gene names: 94309525

Gene position: 622494-621745 (Counterclockwise)

Preceding gene: 94309526

Following gene: 94309524

Centisome position: 15.85

GC content: 65.07

Gene sequence:

>750_bases
ATGGCACGCGACCAGATCGCGCGGTCACGGCGCGTGGCCGCCGATGTGATGGCGGAGCTGACCGACGACGACGAACGCAC
CCCGCTGGCAGAGGTACCCACCGCATCCTCACGCGGGTTGCTGTCGTGCCATGCATGCGACCTGGTGAGCCCCATCACGC
TCGAAGGCGAACCGTGCCCACGCTGCGGCGCCACGCTACACCGCCGCAAGCCGGCCAGCCTGGCGCGCACCTGGGCCTTC
CTGCTGGCCGCGTACATCCTCTACATCCCGGCCAACCTGCTACCGGTGATGGTCACCGAGTCGATCCTGGGCGTGCAGCG
CGACACCATCCTGTCCGGTGTGCTCTATCTGTGGCTATCCGGATCGCACATGCTGGCTGGCGTGGTGCTGATCGCGAGTA
TCGTCGTGCCGCTGCTGAAGATGATGATCCTGACGCTGCTGCTGATCTCGGTGCACATGAAATCTACATGGCGCATCCGC
CAGCAGACCAAGCTGTACGGGCTGGTCGAAGTCATCGGCCGCTGGTCGATGCTTGATATCTTCGTGGTGGCGCTGCTGGC
CTCGCTGGTGCGCGCGGGCGCGCTAGCCACGATCATCCCCGGCGCCGGCGCGCTGGCATTTGCCTCGGTGGTCGTGATGA
CCATGCTGGCATCGCTGAGCTTCGACCCGCGCCTACTTTGGGACTCGCTCGAGACCCCGAACCCCTCTTCCATCGAATTG
CCGGAATCCGACAATGCCCGATCACGATAG

Upstream 100 bases:

>100_bases
ATTACCTGGAAACGCCGGATGGAGATGACACCCCGCCCGGCGCGCAGGAGCCCACGCCATGAGCCAGCCATCACGCCCAT
CGCGCCCATCACGCACGGCC

Downstream 100 bases:

>100_bases
TCCCTCCCCGCCGCCGACCTCCGGTGGCGTGCCCCAGCCCGCGCGCAAGCGTCGCGCCCGCTGGCTGCCATCGCTGGTGT
GGCTGATCCCGATTGTCGCC

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MARDQIARSRRVAADVMAELTDDDERTPLAEVPTASSRGLLSCHACDLVSPITLEGEPCPRCGATLHRRKPASLARTWAF
LLAAYILYIPANLLPVMVTESILGVQRDTILSGVLYLWLSGSHMLAGVVLIASIVVPLLKMMILTLLLISVHMKSTWRIR
QQTKLYGLVEVIGRWSMLDIFVVALLASLVRAGALATIIPGAGALAFASVVVMTMLASLSFDPRLLWDSLETPNPSSIEL
PESDNARSR

Sequences:

>Translated_249_residues
MARDQIARSRRVAADVMAELTDDDERTPLAEVPTASSRGLLSCHACDLVSPITLEGEPCPRCGATLHRRKPASLARTWAF
LLAAYILYIPANLLPVMVTESILGVQRDTILSGVLYLWLSGSHMLAGVVLIASIVVPLLKMMILTLLLISVHMKSTWRIR
QQTKLYGLVEVIGRWSMLDIFVVALLASLVRAGALATIIPGAGALAFASVVVMTMLASLSFDPRLLWDSLETPNPSSIEL
PESDNARSR
>Mature_248_residues
ARDQIARSRRVAADVMAELTDDDERTPLAEVPTASSRGLLSCHACDLVSPITLEGEPCPRCGATLHRRKPASLARTWAFL
LAAYILYIPANLLPVMVTESILGVQRDTILSGVLYLWLSGSHMLAGVVLIASIVVPLLKMMILTLLLISVHMKSTWRIRQ
QTKLYGLVEVIGRWSMLDIFVVALLASLVRAGALATIIPGAGALAFASVVVMTMLASLSFDPRLLWDSLETPNPSSIELP
ESDNARSR

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=224, Percent_Identity=41.5178571428571, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1788137, Length=201, Percent_Identity=40.2985074626866, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 27071; Mature: 26940

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDQIARSRRVAADVMAELTDDDERTPLAEVPTASSRGLLSCHACDLVSPITLEGEPCP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCEECCCCCC
RCGATLHRRKPASLARTWAFLLAAYILYIPANLLPVMVTESILGVQRDTILSGVLYLWLS
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSHMLAGVVLIASIVVPLLKMMILTLLLISVHMKSTWRIRQQTKLYGLVEVIGRWSMLDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
FVVALLASLVRAGALATIIPGAGALAFASVVVMTMLASLSFDPRLLWDSLETPNPSSIEL
HHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEC
PESDNARSR
CCCCCCCCC
>Mature Secondary Structure 
ARDQIARSRRVAADVMAELTDDDERTPLAEVPTASSRGLLSCHACDLVSPITLEGEPCP
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCEECCCCCC
RCGATLHRRKPASLARTWAFLLAAYILYIPANLLPVMVTESILGVQRDTILSGVLYLWLS
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSHMLAGVVLIASIVVPLLKMMILTLLLISVHMKSTWRIRQQTKLYGLVEVIGRWSMLDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
FVVALLASLVRAGALATIIPGAGALAFASVVVMTMLASLSFDPRLLWDSLETPNPSSIEL
HHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEC
PESDNARSR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]