Click here to switch to the map view.

The map label for this gene is pqiB [H]

Identifier: 94309524

GI number: 94309524

Start: 620121

End: 621761

Strand: Reverse

Name: pqiB [H]

Synonym: Rmet_0579

Alternate gene names: 94309524

Gene position: 621761-620121 (Counterclockwise)

Preceding gene: 94309525

Following gene: 94309523

Centisome position: 15.83

GC content: 65.33

Gene sequence:

>1641_bases
ATGCCCGATCACGATAGTCCCTCCCCGCCGCCGACCTCCGGTGGCGTGCCCCAGCCCGCGCGCAAGCGTCGCGCCCGCTG
GCTGCCATCGCTGGTGTGGCTGATCCCGATTGTCGCCGCCGTGGTCGGCGTCTCGCTGCTGATCAACACGCTCGCCTCAC
GCGGGCCAGAGATCAACGTCACCTTCCGCTCCGCCGACGGGCTGACACCGGGCAAGACCGCCGTGCGCTACAAGGACGTC
GACATCGGCCTGGTCAAGTCAGTGCGGCTCGCGTCCGATCGCTCGCACGTGATCGCGTCGATCGAGCTGACAAAGGACGC
CGAGAGCTTCGCCGTCAAGGACACGCGTTTCTGGGTGGTGCGCCCGCGCTTTGCGATCAGTGGCGTATCCGGCCTGGAAA
CGCTGCTCTCGGGCGCCTACATCGGCGTGGATGCCGGCAAGTCACGGGAAAGCACGCGCAACTTCATCGGTCTCGAAGTG
CCACCCGTGGTCACCGCCGACGCGTCCGGCCGCCAGTTCGTGCTGCGCGCCCAGGACTTGGGCTCGCTCGATATCGGCTC
GCCGGTCTACTATCGCCGCGTGCAGGTAGGCCAGGTGGTGGCGTACCAGCTCGACCCGAACGGGCGTGACATCTCGCTGC
GCGTGTTCGTCAACAAGCCGTACGACAAGCTCGTCAATGGCGACACCCGCTTCTGGCACGCCAGCGGCGTCGACCTCAAA
CTCGATGCGAACGGCCTGAAGCTTTCCACGCAATCGCTGGTCACGGTGCTGTTGGGCGGCGTGGCCTTCCAGGCGCCGGA
CAACTCCACCGCAACGCAACCGGCGTCCGAGAATACGCAATTCCTGCTGGCATCGGACCAGTCAGAGGCGATGAAGGAGC
CTGAAGAACTGGCGCCAGCGCTGGCAGTGCTGAACTTCGACCAGTCGGTGCGCGGCCTGTCGCCGGGCGCGCCGGTCGAC
TTCCGCGGTGTGATCGTGGGCCAGGTGCGCTCGATCGGCATCGAATACCAGCGCGACAAAAAGGCATTCCGAATGCCCGT
AGTGGTGGAGTTCTACCCGTCGCGCATGGGATTCCGGGAGCGCGATGTGTCCGACGAGGCCAAGAAGCGCAGCATCGTGC
AGGGCCTGGTCAAGCGCGGCATGCGCGCGCAACTGCGCACTGGCAACCTGCTGACCGGTCAGCTCTACGTGGCGCTCGAC
TTCTTCCCGAAGGCGCCACCGCCGAAGGACCTCGACCTCAACGCGACAATGCCGGAACTGCCGACCACGCCGGGTACCTT
CGATGAGTTGCAGGCCAAGCTCGGCGACATCGTCAACAAGATCGACAAGGTGCCGTTCGATCAGATCGGCCAGGATCTGC
GTACCAGCGTGGTGTCGATGAACAAGATGCTCGATAACGCCGACAAGCTCGTGACCCAACTGCACGGCGATGTAGCGCCC
CAGGTACTCGCCGCGCTGCAGGATGCACGACGTACGCTGAACGCCGCCAATGGCACGCTTGCATCGGACGCGCCGCTGCA
GCAGGATACGCGCCGCATGATGCAGGAACTGACGCGCACGGCCGTGTCCCTGCGTGCGCTGACCGACTATCTCGAGCGCC
ATCCCGAGGCGCTGTTGCGTGGGAAGACGGAGAAGGAATGA

Upstream 100 bases:

>100_bases
GTGATGACCATGCTGGCATCGCTGAGCTTCGACCCGCGCCTACTTTGGGACTCGCTCGAGACCCCGAACCCCTCTTCCAT
CGAATTGCCGGAATCCGACA

Downstream 100 bases:

>100_bases
TGAAACGCTCGCTGATGCTTCTGGCGCTGGCCGCCGCGCTGCTCAACGGCTGTGCATCGCCGGAGCCCCGCTACTACACG
CTCGCATCCACAGCCGCACC

Product: paraquat-inducible protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MPDHDSPSPPPTSGGVPQPARKRRARWLPSLVWLIPIVAAVVGVSLLINTLASRGPEINVTFRSADGLTPGKTAVRYKDV
DIGLVKSVRLASDRSHVIASIELTKDAESFAVKDTRFWVVRPRFAISGVSGLETLLSGAYIGVDAGKSRESTRNFIGLEV
PPVVTADASGRQFVLRAQDLGSLDIGSPVYYRRVQVGQVVAYQLDPNGRDISLRVFVNKPYDKLVNGDTRFWHASGVDLK
LDANGLKLSTQSLVTVLLGGVAFQAPDNSTATQPASENTQFLLASDQSEAMKEPEELAPALAVLNFDQSVRGLSPGAPVD
FRGVIVGQVRSIGIEYQRDKKAFRMPVVVEFYPSRMGFRERDVSDEAKKRSIVQGLVKRGMRAQLRTGNLLTGQLYVALD
FFPKAPPPKDLDLNATMPELPTTPGTFDELQAKLGDIVNKIDKVPFDQIGQDLRTSVVSMNKMLDNADKLVTQLHGDVAP
QVLAALQDARRTLNAANGTLASDAPLQQDTRRMMQELTRTAVSLRALTDYLERHPEALLRGKTEKE

Sequences:

>Translated_546_residues
MPDHDSPSPPPTSGGVPQPARKRRARWLPSLVWLIPIVAAVVGVSLLINTLASRGPEINVTFRSADGLTPGKTAVRYKDV
DIGLVKSVRLASDRSHVIASIELTKDAESFAVKDTRFWVVRPRFAISGVSGLETLLSGAYIGVDAGKSRESTRNFIGLEV
PPVVTADASGRQFVLRAQDLGSLDIGSPVYYRRVQVGQVVAYQLDPNGRDISLRVFVNKPYDKLVNGDTRFWHASGVDLK
LDANGLKLSTQSLVTVLLGGVAFQAPDNSTATQPASENTQFLLASDQSEAMKEPEELAPALAVLNFDQSVRGLSPGAPVD
FRGVIVGQVRSIGIEYQRDKKAFRMPVVVEFYPSRMGFRERDVSDEAKKRSIVQGLVKRGMRAQLRTGNLLTGQLYVALD
FFPKAPPPKDLDLNATMPELPTTPGTFDELQAKLGDIVNKIDKVPFDQIGQDLRTSVVSMNKMLDNADKLVTQLHGDVAP
QVLAALQDARRTLNAANGTLASDAPLQQDTRRMMQELTRTAVSLRALTDYLERHPEALLRGKTEKE
>Mature_545_residues
PDHDSPSPPPTSGGVPQPARKRRARWLPSLVWLIPIVAAVVGVSLLINTLASRGPEINVTFRSADGLTPGKTAVRYKDVD
IGLVKSVRLASDRSHVIASIELTKDAESFAVKDTRFWVVRPRFAISGVSGLETLLSGAYIGVDAGKSRESTRNFIGLEVP
PVVTADASGRQFVLRAQDLGSLDIGSPVYYRRVQVGQVVAYQLDPNGRDISLRVFVNKPYDKLVNGDTRFWHASGVDLKL
DANGLKLSTQSLVTVLLGGVAFQAPDNSTATQPASENTQFLLASDQSEAMKEPEELAPALAVLNFDQSVRGLSPGAPVDF
RGVIVGQVRSIGIEYQRDKKAFRMPVVVEFYPSRMGFRERDVSDEAKKRSIVQGLVKRGMRAQLRTGNLLTGQLYVALDF
FPKAPPPKDLDLNATMPELPTTPGTFDELQAKLGDIVNKIDKVPFDQIGQDLRTSVVSMNKMLDNADKLVTQLHGDVAPQ
VLAALQDARRTLNAANGTLASDAPLQQDTRRMMQELTRTAVSLRALTDYLERHPEALLRGKTEKE

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiB family [H]

Homologues:

Organism=Escherichia coli, GI1787184, Length=516, Percent_Identity=32.3643410852713, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI87081984, Length=325, Percent_Identity=32.6153846153846, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 59624; Mature: 59493

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDHDSPSPPPTSGGVPQPARKRRARWLPSLVWLIPIVAAVVGVSLLINTLASRGPEINV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TFRSADGLTPGKTAVRYKDVDIGLVKSVRLASDRSHVIASIELTKDAESFAVKDTRFWVV
EEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHEEECCEEEEE
RPRFAISGVSGLETLLSGAYIGVDAGKSRESTRNFIGLEVPPVVTADASGRQFVLRAQDL
ECCHHHCCCHHHHHHHCCCEEEECCCCCCHHHHCEECEECCCEEEECCCCCEEEEEECCC
GSLDIGSPVYYRRVQVGQVVAYQLDPNGRDISLRVFVNKPYDKLVNGDTRFWHASGVDLK
CCCCCCCCHHEEEEEECEEEEEEECCCCCEEEEEEEEECCHHHHCCCCCEEEECCCCEEE
LDANGLKLSTQSLVTVLLGGVAFQAPDNSTATQPASENTQFLLASDQSEAMKEPEELAPA
ECCCCCEECHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHHCCHHHHHHH
LAVLNFDQSVRGLSPGAPVDFRGVIVGQVRSIGIEYQRDKKAFRMPVVVEFYPSRMGFRE
HHHCCCCHHHCCCCCCCCCCCCCEEEEHHHHCCCEEECCCHHHCCCEEEEECCCCCCCCC
RDVSDEAKKRSIVQGLVKRGMRAQLRTGNLLTGQLYVALDFFPKAPPPKDLDLNATMPEL
CCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
PTTPGTFDELQAKLGDIVNKIDKVPFDQIGQDLRTSVVSMNKMLDNADKLVTQLHGDVAP
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QVLAALQDARRTLNAANGTLASDAPLQQDTRRMMQELTRTAVSLRALTDYLERHPEALLR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
GKTEKE
CCCCCC
>Mature Secondary Structure 
PDHDSPSPPPTSGGVPQPARKRRARWLPSLVWLIPIVAAVVGVSLLINTLASRGPEINV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TFRSADGLTPGKTAVRYKDVDIGLVKSVRLASDRSHVIASIELTKDAESFAVKDTRFWVV
EEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHEEECCEEEEE
RPRFAISGVSGLETLLSGAYIGVDAGKSRESTRNFIGLEVPPVVTADASGRQFVLRAQDL
ECCHHHCCCHHHHHHHCCCEEEECCCCCCHHHHCEECEECCCEEEECCCCCEEEEEECCC
GSLDIGSPVYYRRVQVGQVVAYQLDPNGRDISLRVFVNKPYDKLVNGDTRFWHASGVDLK
CCCCCCCCHHEEEEEECEEEEEEECCCCCEEEEEEEEECCHHHHCCCCCEEEECCCCEEE
LDANGLKLSTQSLVTVLLGGVAFQAPDNSTATQPASENTQFLLASDQSEAMKEPEELAPA
ECCCCCEECHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHHCCHHHHHHH
LAVLNFDQSVRGLSPGAPVDFRGVIVGQVRSIGIEYQRDKKAFRMPVVVEFYPSRMGFRE
HHHCCCCHHHCCCCCCCCCCCCCEEEEHHHHCCCEEECCCHHHCCCEEEEECCCCCCCCC
RDVSDEAKKRSIVQGLVKRGMRAQLRTGNLLTGQLYVALDFFPKAPPPKDLDLNATMPEL
CCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
PTTPGTFDELQAKLGDIVNKIDKVPFDQIGQDLRTSVVSMNKMLDNADKLVTQLHGDVAP
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QVLAALQDARRTLNAANGTLASDAPLQQDTRRMMQELTRTAVSLRALTDYLERHPEALLR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
GKTEKE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7751275 [H]