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The map label for this gene is htrE [H]

Identifier: 94309519

GI number: 94309519

Start: 614604

End: 617162

Strand: Reverse

Name: htrE [H]

Synonym: Rmet_0574

Alternate gene names: 94309519

Gene position: 617162-614604 (Counterclockwise)

Preceding gene: 94309520

Following gene: 94309516

Centisome position: 15.71

GC content: 61.98

Gene sequence:

>2559_bases
ATGCGCACTCGGAAGCCGCGCGCCTCGCGCGCTCTGGCTGCGCGTTGGATCCTGGCCACCGCTCTGCCCACCGCGGTATT
TGCTAATGAACCCGGCAAGACGGCCACCATCGCAGCCGTCAAGTTCAATTCAGATTTTCTGAAACGTTCCGATGGCACCA
GCGTCGATGTCAGCCGGTTTGCGTTTGGCAACCCCATCTCACCTGGCGACCATGCGGTCGACATCTACCTGAACGGATCG
TGGGTTGGTCGAGAGACAGTGCGATTCCGGTCCCGGGACGAGGTTGTCGGCCCATGCATGGACCGATCGCTCATTACCCG
GTTGAATCTCGACGAACAGGCGCTGCCACCCGCCAGCCGCAATGCGATAGCGCAGGCCGTCAGTGGCGAATGCACTCGCC
CATCGGACATCTCGGAAGACCTCACCTGGTCGTTCAACCTCAATGACCTGCGTCTCGACATCGGCGTGGCGCAGGCATTG
TTACGCCGCACGCCGCGCGGCAGCGTCAGCCCAGAGCTCCTGGATGATGGCGTCCCGTCCGCGACGGTCGCCTACAATTT
CAACACGTTCCACACTACTGGTAGCTCATCTGTCACTTCTACCTACCTTGGCATCGATTCCGGATTAAACATCGGTGCCT
GGCACCTGCGGCAGCGCTCCTCGATGAGTTGGCAGTCCATGGGCCAAAGCACCTACGACTACCAGAACATCGCGACCTAT
TTGCAGCGGGATATATCGCGCCTGCGTAGTCAGCTCACCGTTGGCGATGCCTACACGGATGGAGCCGTCTTCGACAGCTT
TTCCGTGCGCGGCGTGAATCTGGCCAGCGATGACCGGATGCTTCCTGACTCCGCACGCGGCTATGCGCCACTGGTGCGAG
GCGTCGCCCGCTCCAATGCGCGTGTCACGGTCACGCAGAATGGCAACAAGCTCTATGAAACGACCGTGGCGCCAGGACCG
TTCGAGATCAAGGATCTCTACGCCACCGGTTATGGCGGCAATCTGCTCGTCACGGTGACAGAAGCCGACGGCAGCCAAAG
CAGCTTTACCGTGCCCTATGCATCTGTGGCTCAGCTTCTACGGCCCGGTATCACGCGGTACTCGGCCACGGTTGGGGAGT
ACCGCGATGGCTCGCGCACGTCTTCCCGCCGCGAGAAACTGGTCCAGGGTACGGTGCAGCACGGGTTCAACAACTTCGTA
ACGGGCTATGCCGGGCTAGTCCTCTCGGAGGGCTACCGGGCGGGCCTGATCGGCGCGGCCTTGAATCTGCCCATTGGCGC
ATTCGCGCTGGATGCGACCCATGCCCACGCCTCGATCGACCAGGTTGACAACACCAGCGGACAAAGCGTGCGCCTCAGCT
ACAGCAAGTTCGTGCCGTCAACTAGCACGAGTATGTCACTCGCCGCCTATCGCTATGCGACCCGTGGCTTCTGGACGATG
AGCGACGCATTCACGGCTCGCGCCAGCGGTGGCAATGCCCGCGCCGTGGACCGCCAGCGCAGCCAGGTCCAACTCACGCT
GAATCAGAGTCTCGGAGATCGCTGGGGCAACTTCTATCTCACAGGCACTTCCGCGGAATACTGGAATCGGGGCGGTACTG
CGCTGATGTTCCAGGTGGGCTACAGCAACTCGCTGCGTGTGCTGGGACTGCCGATGACCTACAACATCGCGGCCTCACGC
CAACGCGAGGCGATGACCGGCCGGTTCACCACCCAGGTTTTCGCCAGCCTCACCGTACCGCTGGGCAAGAGCAGCCACGC
CCCGATGCTGTCGTTCGGCGCCACGCATAGTGACAGCCAATCCTCGCAACAGATGCGGCTGAGCGGCACTGCACTCGAGG
ACAACGCCTTCACCTATGGCCTGAACGTCGACCGTTCGCCGAACACAACCACCGGCGGTGGCAACGTACAGTACCGGACG
CCTTACACCACCGTTTCCGCTTCTGTCAGCGGCGGCGGCGGTTACACGCAATACTCGGGTGGCCTGCAAGGCGCCCTGGT
CGCCCACCAAGGAGGCATCACACTTGCCAACTTCCTTGGCGACACCATCGGCATCGTCGAAGCAAAGGGCGCTACCGGCG
CGCGCGTCGCCAATGCGACGGGCGTCAGGATCGACGCATTCGGCTACGCCATTGTGCCGTACCTCCAGCCTTACAACATG
AACACGATCGAGATAGATCCACGCGGGATACCGCTGGATGTATCGCTGGACGCGACCAGCGCCCAGGTAGCGCCGCGCGC
GAACGCAGCGGTAAAAATCAAGTTCGCCGCGCTCAGCGGACGCGCCGTCATCATTTCAGCCAGCCAGCCCGATGGAGCGC
CTTTGCCCTTTGGCGCATCAGTGCGCGATAGGGACAATGCCGAAATCGGCGTGGTTGGCCAAAGCGGCATCATTTTCGCG
CGTGGCATCGAAGACACCGGACGCTTGCAGGTGTCCTGGGGCACACACTCAGCGCAACGCTGCACGATCGAATATCGGCT
GCCGGAGAAGGTCCGCAATGCGACATCATTCACGCAGATCCGATCGGTATGCCAGCCCGACGCAAAGGGGGAATCGTGA

Upstream 100 bases:

>100_bases
AACCCGCGCAGGTCAGTTACACGTTTATCTCGGACTATGGCGCCGGTGTATCTGGCGTCCACAATGCGAAGCCAACACAG
GAAGCGAAAGGGCAATGACG

Downstream 100 bases:

>100_bases
ATGCCGATACTGCTATCAGATCGCGCCAAATGTTGCCAACCATCGCCGTGACTAGGCTTGGCCTGATCACTATCGGCGCA
ATGTCAACGCCTCGCACGCG

Product: Fimbrial biogenesis outer membrane usher

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 852; Mature: 852

Protein sequence:

>852_residues
MRTRKPRASRALAARWILATALPTAVFANEPGKTATIAAVKFNSDFLKRSDGTSVDVSRFAFGNPISPGDHAVDIYLNGS
WVGRETVRFRSRDEVVGPCMDRSLITRLNLDEQALPPASRNAIAQAVSGECTRPSDISEDLTWSFNLNDLRLDIGVAQAL
LRRTPRGSVSPELLDDGVPSATVAYNFNTFHTTGSSSVTSTYLGIDSGLNIGAWHLRQRSSMSWQSMGQSTYDYQNIATY
LQRDISRLRSQLTVGDAYTDGAVFDSFSVRGVNLASDDRMLPDSARGYAPLVRGVARSNARVTVTQNGNKLYETTVAPGP
FEIKDLYATGYGGNLLVTVTEADGSQSSFTVPYASVAQLLRPGITRYSATVGEYRDGSRTSSRREKLVQGTVQHGFNNFV
TGYAGLVLSEGYRAGLIGAALNLPIGAFALDATHAHASIDQVDNTSGQSVRLSYSKFVPSTSTSMSLAAYRYATRGFWTM
SDAFTARASGGNARAVDRQRSQVQLTLNQSLGDRWGNFYLTGTSAEYWNRGGTALMFQVGYSNSLRVLGLPMTYNIAASR
QREAMTGRFTTQVFASLTVPLGKSSHAPMLSFGATHSDSQSSQQMRLSGTALEDNAFTYGLNVDRSPNTTTGGGNVQYRT
PYTTVSASVSGGGGYTQYSGGLQGALVAHQGGITLANFLGDTIGIVEAKGATGARVANATGVRIDAFGYAIVPYLQPYNM
NTIEIDPRGIPLDVSLDATSAQVAPRANAAVKIKFAALSGRAVIISASQPDGAPLPFGASVRDRDNAEIGVVGQSGIIFA
RGIEDTGRLQVSWGTHSAQRCTIEYRLPEKVRNATSFTQIRSVCQPDAKGES

Sequences:

>Translated_852_residues
MRTRKPRASRALAARWILATALPTAVFANEPGKTATIAAVKFNSDFLKRSDGTSVDVSRFAFGNPISPGDHAVDIYLNGS
WVGRETVRFRSRDEVVGPCMDRSLITRLNLDEQALPPASRNAIAQAVSGECTRPSDISEDLTWSFNLNDLRLDIGVAQAL
LRRTPRGSVSPELLDDGVPSATVAYNFNTFHTTGSSSVTSTYLGIDSGLNIGAWHLRQRSSMSWQSMGQSTYDYQNIATY
LQRDISRLRSQLTVGDAYTDGAVFDSFSVRGVNLASDDRMLPDSARGYAPLVRGVARSNARVTVTQNGNKLYETTVAPGP
FEIKDLYATGYGGNLLVTVTEADGSQSSFTVPYASVAQLLRPGITRYSATVGEYRDGSRTSSRREKLVQGTVQHGFNNFV
TGYAGLVLSEGYRAGLIGAALNLPIGAFALDATHAHASIDQVDNTSGQSVRLSYSKFVPSTSTSMSLAAYRYATRGFWTM
SDAFTARASGGNARAVDRQRSQVQLTLNQSLGDRWGNFYLTGTSAEYWNRGGTALMFQVGYSNSLRVLGLPMTYNIAASR
QREAMTGRFTTQVFASLTVPLGKSSHAPMLSFGATHSDSQSSQQMRLSGTALEDNAFTYGLNVDRSPNTTTGGGNVQYRT
PYTTVSASVSGGGGYTQYSGGLQGALVAHQGGITLANFLGDTIGIVEAKGATGARVANATGVRIDAFGYAIVPYLQPYNM
NTIEIDPRGIPLDVSLDATSAQVAPRANAAVKIKFAALSGRAVIISASQPDGAPLPFGASVRDRDNAEIGVVGQSGIIFA
RGIEDTGRLQVSWGTHSAQRCTIEYRLPEKVRNATSFTQIRSVCQPDAKGES
>Mature_852_residues
MRTRKPRASRALAARWILATALPTAVFANEPGKTATIAAVKFNSDFLKRSDGTSVDVSRFAFGNPISPGDHAVDIYLNGS
WVGRETVRFRSRDEVVGPCMDRSLITRLNLDEQALPPASRNAIAQAVSGECTRPSDISEDLTWSFNLNDLRLDIGVAQAL
LRRTPRGSVSPELLDDGVPSATVAYNFNTFHTTGSSSVTSTYLGIDSGLNIGAWHLRQRSSMSWQSMGQSTYDYQNIATY
LQRDISRLRSQLTVGDAYTDGAVFDSFSVRGVNLASDDRMLPDSARGYAPLVRGVARSNARVTVTQNGNKLYETTVAPGP
FEIKDLYATGYGGNLLVTVTEADGSQSSFTVPYASVAQLLRPGITRYSATVGEYRDGSRTSSRREKLVQGTVQHGFNNFV
TGYAGLVLSEGYRAGLIGAALNLPIGAFALDATHAHASIDQVDNTSGQSVRLSYSKFVPSTSTSMSLAAYRYATRGFWTM
SDAFTARASGGNARAVDRQRSQVQLTLNQSLGDRWGNFYLTGTSAEYWNRGGTALMFQVGYSNSLRVLGLPMTYNIAASR
QREAMTGRFTTQVFASLTVPLGKSSHAPMLSFGATHSDSQSSQQMRLSGTALEDNAFTYGLNVDRSPNTTTGGGNVQYRT
PYTTVSASVSGGGGYTQYSGGLQGALVAHQGGITLANFLGDTIGIVEAKGATGARVANATGVRIDAFGYAIVPYLQPYNM
NTIEIDPRGIPLDVSLDATSAQVAPRANAAVKIKFAALSGRAVIISASQPDGAPLPFGASVRDRDNAEIGVVGQSGIIFA
RGIEDTGRLQVSWGTHSAQRCTIEYRLPEKVRNATSFTQIRSVCQPDAKGES

Specific function: Involved in the export and assembly of the type 3 fimbrial subunit (mrkA) [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1786332, Length=847, Percent_Identity=34.3565525383707, Blast_Score=469, Evalue=1e-133,
Organism=Escherichia coli, GI1790772, Length=844, Percent_Identity=34.2417061611374, Blast_Score=460, Evalue=1e-130,
Organism=Escherichia coli, GI1787172, Length=849, Percent_Identity=34.7467608951708, Blast_Score=459, Evalue=1e-130,
Organism=Escherichia coli, GI1789533, Length=831, Percent_Identity=32.7316486161252, Blast_Score=427, Evalue=1e-120,
Organism=Escherichia coli, GI1786744, Length=848, Percent_Identity=32.5471698113208, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1788427, Length=833, Percent_Identity=31.0924369747899, Blast_Score=368, Evalue=1e-102,
Organism=Escherichia coli, GI87081778, Length=847, Percent_Identity=26.2101534828808, Blast_Score=246, Evalue=6e-66,
Organism=Escherichia coli, GI1789610, Length=841, Percent_Identity=22.7110582639715, Blast_Score=161, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 91242; Mature: 91242

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRKPRASRALAARWILATALPTAVFANEPGKTATIAAVKFNSDFLKRSDGTSVDVSRF
CCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCHHHHCCCCCEEEEHHH
AFGNPISPGDHAVDIYLNGSWVGRETVRFRSRDEVVGPCMDRSLITRLNLDEQALPPASR
CCCCCCCCCCCEEEEEECCEECCCHHEEECCCCCCCCCCCCCHHHHHCCCCHHCCCCCHH
NAIAQAVSGECTRPSDISEDLTWSFNLNDLRLDIGVAQALLRRTPRGSVSPELLDDGVPS
HHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCCCHHHHHCCCCC
ATVAYNFNTFHTTGSSSVTSTYLGIDSGLNIGAWHLRQRSSMSWQSMGQSTYDYQNIATY
EEEEEECEEEEECCCCCCEEEEEECCCCCCCCEEEHHHCCCCCHHHCCCCCCCHHHHHHH
LQRDISRLRSQLTVGDAYTDGAVFDSFSVRGVNLASDDRMLPDSARGYAPLVRGVARSNA
HHHHHHHHHHHEEECCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
RVTVTQNGNKLYETTVAPGPFEIKDLYATGYGGNLLVTVTEADGSQSSFTVPYASVAQLL
EEEEEECCCEEEEEECCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEECCHHHHHHHH
RPGITRYSATVGEYRDGSRTSSRREKLVQGTVQHGFNNFVTGYAGLVLSEGYRAGLIGAA
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCEEEEHH
LNLPIGAFALDATHAHASIDQVDNTSGQSVRLSYSKFVPSTSTSMSLAAYRYATRGFWTM
HCCCCEEEEEECCCCCCCHHHCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHCCEEEE
SDAFTARASGGNARAVDRQRSQVQLTLNQSLGDRWGNFYLTGTSAEYWNRGGTALMFQVG
CCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEC
YSNSLRVLGLPMTYNIAASRQREAMTGRFTTQVFASLTVPLGKSSHAPMLSFGATHSDSQ
CCCCEEEEECCEEEEEHHCCHHHHHCCHHHHEEHEEEEECCCCCCCCCEEEECCCCCCCC
SSQQMRLSGTALEDNAFTYGLNVDRSPNTTTGGGNVQYRTPYTTVSASVSGGGGYTQYSG
CCCEEEEECCEECCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEECC
GLQGALVAHQGGITLANFLGDTIGIVEAKGATGARVANATGVRIDAFGYAIVPYLQPYNM
CCCEEEEEECCCEEEHHHCCCCEEEEEECCCCCCEEECCCCEEEEECCEEEEEEECCCCC
NTIEIDPRGIPLDVSLDATSAQVAPRANAAVKIKFAALSGRAVIISASQPDGAPLPFGAS
CEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCC
VRDRDNAEIGVVGQSGIIFARGIEDTGRLQVSWGTHSAQRCTIEYRLPEKVRNATSFTQI
CCCCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHH
RSVCQPDAKGES
HHHHCCCCCCCC
>Mature Secondary Structure
MRTRKPRASRALAARWILATALPTAVFANEPGKTATIAAVKFNSDFLKRSDGTSVDVSRF
CCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCHHHHCCCCCEEEEHHH
AFGNPISPGDHAVDIYLNGSWVGRETVRFRSRDEVVGPCMDRSLITRLNLDEQALPPASR
CCCCCCCCCCCEEEEEECCEECCCHHEEECCCCCCCCCCCCCHHHHHCCCCHHCCCCCHH
NAIAQAVSGECTRPSDISEDLTWSFNLNDLRLDIGVAQALLRRTPRGSVSPELLDDGVPS
HHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCCCHHHHHCCCCC
ATVAYNFNTFHTTGSSSVTSTYLGIDSGLNIGAWHLRQRSSMSWQSMGQSTYDYQNIATY
EEEEEECEEEEECCCCCCEEEEEECCCCCCCCEEEHHHCCCCCHHHCCCCCCCHHHHHHH
LQRDISRLRSQLTVGDAYTDGAVFDSFSVRGVNLASDDRMLPDSARGYAPLVRGVARSNA
HHHHHHHHHHHEEECCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
RVTVTQNGNKLYETTVAPGPFEIKDLYATGYGGNLLVTVTEADGSQSSFTVPYASVAQLL
EEEEEECCCEEEEEECCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEECCHHHHHHHH
RPGITRYSATVGEYRDGSRTSSRREKLVQGTVQHGFNNFVTGYAGLVLSEGYRAGLIGAA
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCEEEEHH
LNLPIGAFALDATHAHASIDQVDNTSGQSVRLSYSKFVPSTSTSMSLAAYRYATRGFWTM
HCCCCEEEEEECCCCCCCHHHCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHCCEEEE
SDAFTARASGGNARAVDRQRSQVQLTLNQSLGDRWGNFYLTGTSAEYWNRGGTALMFQVG
CCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEC
YSNSLRVLGLPMTYNIAASRQREAMTGRFTTQVFASLTVPLGKSSHAPMLSFGATHSDSQ
CCCCEEEEECCEEEEEHHCCHHHHHCCHHHHEEHEEEEECCCCCCCCCEEEECCCCCCCC
SSQQMRLSGTALEDNAFTYGLNVDRSPNTTTGGGNVQYRTPYTTVSASVSGGGGYTQYSG
CCCEEEEECCEECCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEECC
GLQGALVAHQGGITLANFLGDTIGIVEAKGATGARVANATGVRIDAFGYAIVPYLQPYNM
CCCEEEEEECCCEEEHHHCCCCEEEEEECCCCCCEEECCCCEEEEECCEEEEEEECCCCC
NTIEIDPRGIPLDVSLDATSAQVAPRANAAVKIKFAALSGRAVIISASQPDGAPLPFGAS
CEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCC
VRDRDNAEIGVVGQSGIIFARGIEDTGRLQVSWGTHSAQRCTIEYRLPEKVRNATSFTQI
CCCCCCCEEEEEECCCEEEEECCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHH
RSVCQPDAKGES
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1670938 [H]