| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is fdsR [H]
Identifier: 94309497
GI number: 94309497
Start: 589658
End: 590779
Strand: Reverse
Name: fdsR [H]
Synonym: Rmet_0552
Alternate gene names: 94309497
Gene position: 590779-589658 (Counterclockwise)
Preceding gene: 94309503
Following gene: 94309492
Centisome position: 15.04
GC content: 65.42
Gene sequence:
>1122_bases TTGCCCCGTTCAATATGCTATTTTCCGCATATGCTCCGCATTTCGATCCACCCCCACCTGCAGATTCGCGACGACACGGC CCGGACACCGGCGCCAGCGCTCGACGTATCGCGACTCGTGGCGTTGCTCGGCCATATCGAAGCCACCGGCAATATCGCCC AGTCGGCGGAAGCGGTGTCGTTGTCATATCGCTACGCCTGGGGAATCCTGCGCGATGCGGAGACCCTGTTCGGCGGCGCG CTGATCGCCAAGACACGCGGGCGCGGATCGGTGCTGACGCCGCTGGCGCAGCAACTCGTCTGGGCCAGCAAGCGCATTGC CGCGCGGCTGTCGCCCACACTGGAAAGCCTGGCCTCGGAACTCGAGATCGAACTCAAGAAGCTGATGGCCGAGTCCGACC CGGCCGTGCGCATCCATGCCAGCCACGGATTCGCGGTGGCCGCGCTACGCGATTTTCTCGATGAACAGAAGGTGCGGCAC GACCTGAAGTACTGCGGCAGCCTGGAAGCCGCCGCCGCGCTGGCCGAAGGCGCCTGTGACATCGCCGGCTTCCACGTGCC GATCGGCGAGTTCGAGGAAGAGACACTGCGGCGATTCACGCGCCTGCTGCATCCGCAAACCCACTGCCTGATTCACCTGG CCACGCGCGCGCAGGGGTTGTTCGTGCGGCCGGGCAACCCGCTCAATGTGTTGACGCTGGAAGACCTGGTGCGCCCCGAC GTGCGCTTCGTCAATCGCCAGATGGGCTCTGGCACCCGGTTGCTGCTGGACCTGATGCTCGCAAGGCGCGGCATCGACAG CAGCCGCATCGAAGGCTTCAACAACGGCGAGTTCACCCACGCCGCGGTGGCCGCATATATCGGCAGCGGCATGGCCGATG TGGGTTTCGGCGTGGAGACGGCCGCGCGCCGCTTCGGGCTGGAGTTCGTGCCGGTGCTCAAGGAGCGCTACTTCTTCGCC ATCGAGACGAAGGCGCTGCAGAACCCGGCGCTGACGGGAGCGGTGAACGCGATGAAGAGCGGGAGTTTCCGGGAGCGCGT CAATGCGCTGCCCGGCTACGATGGCGAGATGACCGGACTGGTGCAGTCATTCGAGGAAGCGTTCCCGGGAATGCTGCCGT AG
Upstream 100 bases:
>100_bases GTACCGTTTTGCGGCACCCACCGATATCGGCTTTTTTCTACATATTTGGTGGTACCGAGGCTGGCTTTTTTGCCGCTTTG TGCGACTATAGGACCGTGGT
Downstream 100 bases:
>100_bases GCGCGTGGCGGGGAAATCCCATCCACGCGCCTGACGCGCCTGACTCCCGAATCAATACACCACGACCGACAGCGCCGCAC CCGCCGGCACGCGCACCTTG
Product: formate dehydrogenase operon transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MPRSICYFPHMLRISIHPHLQIRDDTARTPAPALDVSRLVALLGHIEATGNIAQSAEAVSLSYRYAWGILRDAETLFGGA LIAKTRGRGSVLTPLAQQLVWASKRIAARLSPTLESLASELEIELKKLMAESDPAVRIHASHGFAVAALRDFLDEQKVRH DLKYCGSLEAAAALAEGACDIAGFHVPIGEFEEETLRRFTRLLHPQTHCLIHLATRAQGLFVRPGNPLNVLTLEDLVRPD VRFVNRQMGSGTRLLLDLMLARRGIDSSRIEGFNNGEFTHAAVAAYIGSGMADVGFGVETAARRFGLEFVPVLKERYFFA IETKALQNPALTGAVNAMKSGSFRERVNALPGYDGEMTGLVQSFEEAFPGMLP
Sequences:
>Translated_373_residues MPRSICYFPHMLRISIHPHLQIRDDTARTPAPALDVSRLVALLGHIEATGNIAQSAEAVSLSYRYAWGILRDAETLFGGA LIAKTRGRGSVLTPLAQQLVWASKRIAARLSPTLESLASELEIELKKLMAESDPAVRIHASHGFAVAALRDFLDEQKVRH DLKYCGSLEAAAALAEGACDIAGFHVPIGEFEEETLRRFTRLLHPQTHCLIHLATRAQGLFVRPGNPLNVLTLEDLVRPD VRFVNRQMGSGTRLLLDLMLARRGIDSSRIEGFNNGEFTHAAVAAYIGSGMADVGFGVETAARRFGLEFVPVLKERYFFA IETKALQNPALTGAVNAMKSGSFRERVNALPGYDGEMTGLVQSFEEAFPGMLP >Mature_372_residues PRSICYFPHMLRISIHPHLQIRDDTARTPAPALDVSRLVALLGHIEATGNIAQSAEAVSLSYRYAWGILRDAETLFGGAL IAKTRGRGSVLTPLAQQLVWASKRIAARLSPTLESLASELEIELKKLMAESDPAVRIHASHGFAVAALRDFLDEQKVRHD LKYCGSLEAAAALAEGACDIAGFHVPIGEFEEETLRRFTRLLHPQTHCLIHLATRAQGLFVRPGNPLNVLTLEDLVRPDV RFVNRQMGSGTRLLLDLMLARRGIDSSRIEGFNNGEFTHAAVAAYIGSGMADVGFGVETAARRFGLEFVPVLKERYFFAI ETKALQNPALTGAVNAMKSGSFRERVNALPGYDGEMTGLVQSFEEAFPGMLP
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40828; Mature: 40696
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSICYFPHMLRISIHPHLQIRDDTARTPAPALDVSRLVALLGHIEATGNIAQSAEAVS CCCCEEECCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHE LSYRYAWGILRDAETLFGGALIAKTRGRGSVLTPLAQQLVWASKRIAARLSPTLESLASE EEHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LEIELKKLMAESDPAVRIHASHGFAVAALRDFLDEQKVRHDLKYCGSLEAAAALAEGACD HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHH IAGFHVPIGEFEEETLRRFTRLLHPQTHCLIHLATRAQGLFVRPGNPLNVLTLEDLVRPD HCEEECCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCEEEECCCCCCEEEEHHHHHCHH VRFVNRQMGSGTRLLLDLMLARRGIDSSRIEGFNNGEFTHAAVAAYIGSGMADVGFGVET HHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHCCCHHH AARRFGLEFVPVLKERYFFAIETKALQNPALTGAVNAMKSGSFRERVNALPGYDGEMTGL HHHHHCCHHHHHHHHHEEEEEEHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHH VQSFEEAFPGMLP HHHHHHHCCCCCC >Mature Secondary Structure PRSICYFPHMLRISIHPHLQIRDDTARTPAPALDVSRLVALLGHIEATGNIAQSAEAVS CCCEEECCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHE LSYRYAWGILRDAETLFGGALIAKTRGRGSVLTPLAQQLVWASKRIAARLSPTLESLASE EEHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LEIELKKLMAESDPAVRIHASHGFAVAALRDFLDEQKVRHDLKYCGSLEAAAALAEGACD HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHH IAGFHVPIGEFEEETLRRFTRLLHPQTHCLIHLATRAQGLFVRPGNPLNVLTLEDLVRPD HCEEECCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCEEEECCCCCCEEEEHHHHHCHH VRFVNRQMGSGTRLLLDLMLARRGIDSSRIEGFNNGEFTHAAVAAYIGSGMADVGFGVET HHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHCCCHHH AARRFGLEFVPVLKERYFFAIETKALQNPALTGAVNAMKSGSFRERVNALPGYDGEMTGL HHHHHCCHHHHHHHHHEEEEEEHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHH VQSFEEAFPGMLP HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]