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The map label for this gene is mmgC [H]

Identifier: 94309330

GI number: 94309330

Start: 410451

End: 412238

Strand: Direct

Name: mmgC [H]

Synonym: Rmet_0385

Alternate gene names: 94309330

Gene position: 410451-412238 (Clockwise)

Preceding gene: 94309329

Following gene: 94309331

Centisome position: 10.45

GC content: 64.21

Gene sequence:

>1788_bases
ATGGGCCAGTACACCGCACCGTTGCGCGACATGCAGTTCGTGCTCCATGAACTGCTCGGCGCCGAAGCCGAACTCAAGGC
GATGCCGCAGCACGCGGACATCGACGTGGACACCATCAACCAGGTGCTTGAGGAAGCCGGCAAGTTCTGCTCCGACGTGG
TCTTCCCGCTGAACCAGCCTGGTGACCGTGAAGGCTGCACCTACGTCGGCGACGGCGTGGTGCGCGCGCCCAAGGGCTTC
AAGGAGGCCTATCAGCAGTTCGTGGAAGCCGGCTGGCCCGCACTGGCGTGCGATCCGGAGTTTGGCGGCCAGGGTTTGCC
GATCATGATCAACAACGCGCTGTACGAGATGCTGAACTCGGCCGGCCAGGCATGGACGATGTATCCGGGCCTGTCGCACG
GTGCCTATGAAGCGCTGCACGCGCACGGCACGCCGGAACTGAAGCAGACGTATCTGCCGAAGCTGGTGTCGGGTGTCTGG
ACGGGCACGATGTGCCTGACCGAGCCGCACTGCGGCACCGATCTCGGCATCCTGCGCAGCAAGGCCGAACCGCAGGCCGA
TGGCTCGTACTCGATCACCGGCACCAAGATCTTTATCTCGGCCGGCGAGCATGACATGGCCGAGAACATCATCCACCTCG
TGCTGGCACGCCTGCCGGACGCACCTGGCGGTACCAAGGGCATTTCGCTGTTCGTCGTGCCGAAGTTCATCCCCGACGCC
AACGGCAACCCGGGCGAGCGCAACGGCATCAAGTGCGGCTCGATCGAACACAAGATGGGCATTCACGGCAACGCCACCTG
CGTGATGAACCTCGACGGCGCGCGCGGCTGGATGGTGGGCGAGCCCAACAAGGGCCTGAACGCGATGTTCGTGATGATGA
ACGCCGCGCGCCTCGGCGTTGGCGCCCAGGGTCTGGGCTTGACCGAGGTGGCCTATCAGAACTCGCTGGCCTACGCGAAG
GACCGTCTGCAGATGCGCTCGCTGACTGGCCCGAAGGCACCGGACAAGCCCGCCGACCCGATCATCGTGCACCCGGACGT
GCGTCGCATGTTGCTGACGCAAAAGGCCTACGCCGAAGGTGGCCGCGCGTTCGCCTACTGGACCGCGCTGCAGATCGACC
GTGAACTGTCGCACCCCGACGAAAGCGTGCGCAAGGAAGCCGGCGACCTCGTGGCGCTGCTGACCCCGGTCATCAAGGCC
TTCCTGACCGACAACGCCTTCACCTCGACCAACGAGGGCATGCAGGTGTTCGGCGGCCACGGCTACATCTCCGAGTGGGG
CATGGAGCAATACGTGCGCGACGCGCGTATCAACATGATCTACGAAGGCACCAACACGGTTCAGTCGCTGGACCTGCTGG
GCCGCAAGGTGCTGGGCGACATGGGCGCCAAGCTGAAGGCCTTCGGCAAGATCGTGCAGACGTTTGTCGAGGAAGAAGGC
ACGAGCGAGGCGATGCAGGAGTTCGTCAACCCGCTGGCCGACATCGGCGACAAGGTGCAGAAGCTGACGATGGAGATCGG
CATGAAGGCGATGGGCAATGCCGACGAAGTGGGTGCTGCCGCCGTGCCGTACTTGCGCGTGGTGGGACACCTCGTGTTCT
CGTACTTCTGGGCCCGCATGGCCAAGATCGCCCTGGACAAGCAGGATAGCGGCGACAAGTTCTACACGACCAAGCTGGCC
ACGGCGCGCTTCTACTTCGCCAAGCTGCTGCCGGAAACCGCGGGCGAGATTCGCAAGGCTCGCGCTGGCGCATCCACGCT
GATGGCGCTGGACGCAGATCTGTTCTGA

Upstream 100 bases:

>100_bases
CCGAACCTGAGCCGCCCCACGGGCAGCGCTCGCGCAATCCCACTTCAGGGTGCGCGGCTCGCGCGTGTGGTGGCACTAGC
AAACCTCCAAGGAGTCTTTG

Downstream 100 bases:

>100_bases
TTGGGGTTGCTCCCCTGAGGGTTGTCTCCCTTCTCCCCTGATACGGGAGAAGGGGAGAATCCACCCGCAGCATATTCATC
TCTCCTCAAACGCTCACTAG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MGQYTAPLRDMQFVLHELLGAEAELKAMPQHADIDVDTINQVLEEAGKFCSDVVFPLNQPGDREGCTYVGDGVVRAPKGF
KEAYQQFVEAGWPALACDPEFGGQGLPIMINNALYEMLNSAGQAWTMYPGLSHGAYEALHAHGTPELKQTYLPKLVSGVW
TGTMCLTEPHCGTDLGILRSKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
NGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNAARLGVGAQGLGLTEVAYQNSLAYAK
DRLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGGRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKA
FLTDNAFTSTNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAFGKIVQTFVEEEG
TSEAMQEFVNPLADIGDKVQKLTMEIGMKAMGNADEVGAAAVPYLRVVGHLVFSYFWARMAKIALDKQDSGDKFYTTKLA
TARFYFAKLLPETAGEIRKARAGASTLMALDADLF

Sequences:

>Translated_595_residues
MGQYTAPLRDMQFVLHELLGAEAELKAMPQHADIDVDTINQVLEEAGKFCSDVVFPLNQPGDREGCTYVGDGVVRAPKGF
KEAYQQFVEAGWPALACDPEFGGQGLPIMINNALYEMLNSAGQAWTMYPGLSHGAYEALHAHGTPELKQTYLPKLVSGVW
TGTMCLTEPHCGTDLGILRSKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
NGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNAARLGVGAQGLGLTEVAYQNSLAYAK
DRLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGGRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKA
FLTDNAFTSTNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAFGKIVQTFVEEEG
TSEAMQEFVNPLADIGDKVQKLTMEIGMKAMGNADEVGAAAVPYLRVVGHLVFSYFWARMAKIALDKQDSGDKFYTTKLA
TARFYFAKLLPETAGEIRKARAGASTLMALDADLF
>Mature_594_residues
GQYTAPLRDMQFVLHELLGAEAELKAMPQHADIDVDTINQVLEEAGKFCSDVVFPLNQPGDREGCTYVGDGVVRAPKGFK
EAYQQFVEAGWPALACDPEFGGQGLPIMINNALYEMLNSAGQAWTMYPGLSHGAYEALHAHGTPELKQTYLPKLVSGVWT
GTMCLTEPHCGTDLGILRSKAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDAN
GNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNAARLGVGAQGLGLTEVAYQNSLAYAKD
RLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEGGRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKAF
LTDNAFTSTNEGMQVFGGHGYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAFGKIVQTFVEEEGT
SEAMQEFVNPLADIGDKVQKLTMEIGMKAMGNADEVGAAAVPYLRVVGHLVFSYFWARMAKIALDKQDSGDKFYTTKLAT
ARFYFAKLLPETAGEIRKARAGASTLMALDADLF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=26.2032085561497, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI21361497, Length=430, Percent_Identity=25.8139534883721, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=27.807486631016, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4557235, Length=457, Percent_Identity=26.4770240700219, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI76496475, Length=457, Percent_Identity=26.4770240700219, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI4557233, Length=316, Percent_Identity=28.1645569620253, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI226958412, Length=440, Percent_Identity=25, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI226958414, Length=389, Percent_Identity=25.1928020565553, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4501857, Length=347, Percent_Identity=25.0720461095101, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI4557231, Length=315, Percent_Identity=25.0793650793651, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI187960098, Length=315, Percent_Identity=25.0793650793651, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI87082384, Length=412, Percent_Identity=25.4854368932039, Blast_Score=112, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=424, Percent_Identity=25.7075471698113, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=309, Percent_Identity=29.126213592233, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=369, Percent_Identity=28.1842818428184, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=27.0557029177719, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=428, Percent_Identity=26.6355140186916, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI86563383, Length=372, Percent_Identity=28.494623655914, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI86563381, Length=372, Percent_Identity=28.494623655914, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=405, Percent_Identity=25.4320987654321, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=377, Percent_Identity=23.8726790450928, Blast_Score=89, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=186, Percent_Identity=31.7204301075269, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=252, Percent_Identity=29.3650793650794, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17570075, Length=366, Percent_Identity=22.9508196721311, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=187, Percent_Identity=28.8770053475936, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=356, Percent_Identity=25.2808988764045, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363737, Length=493, Percent_Identity=24.7464503042596, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646207, Length=384, Percent_Identity=25.2604166666667, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=24.5989304812834, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21355753, Length=389, Percent_Identity=25.4498714652956, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24660351, Length=315, Percent_Identity=26.3492063492064, Blast_Score=86, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64586; Mature: 64455

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQYTAPLRDMQFVLHELLGAEAELKAMPQHADIDVDTINQVLEEAGKFCSDVVFPLNQP
CCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GDREGCTYVGDGVVRAPKGFKEAYQQFVEAGWPALACDPEFGGQGLPIMINNALYEMLNS
CCCCCCEEECCCCEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEHHHHHHHHHC
AGQAWTMYPGLSHGAYEALHAHGTPELKQTYLPKLVSGVWTGTMCLTEPHCGTDLGILRS
CCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHC
KAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
CCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
NGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCC
GAQGLGLTEVAYQNSLAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKAFLTDNAFTSTNEGMQVFGGH
CCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
GYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAFGKIVQTFVEEEG
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
TSEAMQEFVNPLADIGDKVQKLTMEIGMKAMGNADEVGAAAVPYLRVVGHLVFSYFWARM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AKIALDKQDSGDKFYTTKLATARFYFAKLLPETAGEIRKARAGASTLMALDADLF
HHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure 
GQYTAPLRDMQFVLHELLGAEAELKAMPQHADIDVDTINQVLEEAGKFCSDVVFPLNQP
CCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GDREGCTYVGDGVVRAPKGFKEAYQQFVEAGWPALACDPEFGGQGLPIMINNALYEMLNS
CCCCCCEEECCCCEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEHHHHHHHHHC
AGQAWTMYPGLSHGAYEALHAHGTPELKQTYLPKLVSGVWTGTMCLTEPHCGTDLGILRS
CCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHC
KAEPQADGSYSITGTKIFISAGEHDMAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
CCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
NGNPGERNGIKCGSIEHKMGIHGNATCVMNLDGARGWMVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCC
GAQGLGLTEVAYQNSLAYAKDRLQMRSLTGPKAPDKPADPIIVHPDVRRMLLTQKAYAEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRAFAYWTALQIDRELSHPDESVRKEAGDLVALLTPVIKAFLTDNAFTSTNEGMQVFGGH
CCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
GYISEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKVLGDMGAKLKAFGKIVQTFVEEEG
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
TSEAMQEFVNPLADIGDKVQKLTMEIGMKAMGNADEVGAAAVPYLRVVGHLVFSYFWARM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AKIALDKQDSGDKFYTTKLATARFYFAKLLPETAGEIRKARAGASTLMALDADLF
HHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]