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The map label for this gene is ybhP [H]

Identifier: 94309326

GI number: 94309326

Start: 406663

End: 407418

Strand: Direct

Name: ybhP [H]

Synonym: Rmet_0381

Alternate gene names: 94309326

Gene position: 406663-407418 (Clockwise)

Preceding gene: 94309325

Following gene: 94309328

Centisome position: 10.35

GC content: 61.64

Gene sequence:

>756_bases
ATGAAGTTGCGCGTTGTCACCTACAACATTCACAAGGGTGTAAAGGGATTCACCGGCAAGCCACGAATCCAGAGCGTGCG
AACCGGCCTGCAGTCGATGGACGCGGATATTGTGTTCCTGCAGGAAGTGCAGGACCGCAATGATCGCCTGATCGCGGCCG
AGTTGTTCGACCCCGATCACACCCAGCTCAACTACCTGGCGACGGATGCCTATCCGCATTCGGTCTATGGCCGCAATGCA
GTGTATGACCATGGCCATCATGGCAATGCAATCCTGTCGCGCCATCCGATCCTGATGTCGGAAAACCTCGATATCTCCGA
TCACCGCTTCGAGCAGCGCGGGCTGTTGCACGCGGTGGCCGATATCAACGGCGTCGAGGCACACCTGATCTGCGTGCACT
TCGGCCTGTTCGCGGGTAGCCGCGTGCGTCAGACCACCGCGCTGGTGGAGCGCGTGCGTAGCGTGGTGCCGGCCGATGCG
CCGCTGGTGATCGCGGGCGACTTCAACGACTGGAACCACAAGCTCGACTCGAAGATCTGCAACACGCTCAATGCCGTGGA
GTCGGCGAATGCGAAGAACGGACGCATCCATACGTTCCCGAGCCATATGCCATGGTGGCAGCTCGACCGTATCTACGCGC
GGGGCTTCGAGTTCGAGCGCACGCAAGCGCTGACCGGCCGCGAATGGGCGCAGCGCTCGGACCATGTCCCGCTGATGGCG
GAACTGGCCCGGCGGGTGGCAATTCCGGAGGTCTGA

Upstream 100 bases:

>100_bases
GCTTCTCCAGCAGCAATGCCGAAGCAGTGCGCCAGCTTGCCTGGCGCGTGGCAGGCGGTCAGGGCGCCGGGCTCGACGTC
ACGAACGGAGCCGCCGCACC

Downstream 100 bases:

>100_bases
TGTCTGGCGATCGGATTCAGCGATCGAGATAACCGCGGATCCACGCGTAGATCGCGTCGACATCCGAGAGGTTCAGAACG
GGCAGGGTCGTCTGTCGGGA

Product: putative endonuclease/exonuclease/phosphatase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKLRVVTYNIHKGVKGFTGKPRIQSVRTGLQSMDADIVFLQEVQDRNDRLIAAELFDPDHTQLNYLATDAYPHSVYGRNA
VYDHGHHGNAILSRHPILMSENLDISDHRFEQRGLLHAVADINGVEAHLICVHFGLFAGSRVRQTTALVERVRSVVPADA
PLVIAGDFNDWNHKLDSKICNTLNAVESANAKNGRIHTFPSHMPWWQLDRIYARGFEFERTQALTGREWAQRSDHVPLMA
ELARRVAIPEV

Sequences:

>Translated_251_residues
MKLRVVTYNIHKGVKGFTGKPRIQSVRTGLQSMDADIVFLQEVQDRNDRLIAAELFDPDHTQLNYLATDAYPHSVYGRNA
VYDHGHHGNAILSRHPILMSENLDISDHRFEQRGLLHAVADINGVEAHLICVHFGLFAGSRVRQTTALVERVRSVVPADA
PLVIAGDFNDWNHKLDSKICNTLNAVESANAKNGRIHTFPSHMPWWQLDRIYARGFEFERTQALTGREWAQRSDHVPLMA
ELARRVAIPEV
>Mature_251_residues
MKLRVVTYNIHKGVKGFTGKPRIQSVRTGLQSMDADIVFLQEVQDRNDRLIAAELFDPDHTQLNYLATDAYPHSVYGRNA
VYDHGHHGNAILSRHPILMSENLDISDHRFEQRGLLHAVADINGVEAHLICVHFGLFAGSRVRQTTALVERVRSVVPADA
PLVIAGDFNDWNHKLDSKICNTLNAVESANAKNGRIHTFPSHMPWWQLDRIYARGFEFERTQALTGREWAQRSDHVPLMA
ELARRVAIPEV

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=245, Percent_Identity=37.9591836734694, Blast_Score=153, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28427; Mature: 28427

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRVVTYNIHKGVKGFTGKPRIQSVRTGLQSMDADIVFLQEVQDRNDRLIAAELFDPDH
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHCCCCCCEEEEEECCCCC
TQLNYLATDAYPHSVYGRNAVYDHGHHGNAILSRHPILMSENLDISDHRFEQRGLLHAVA
CEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHH
DINGVEAHLICVHFGLFAGSRVRQTTALVERVRSVVPADAPLVIAGDFNDWNHKLDSKIC
CCCCCHHEEHEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
NTLNAVESANAKNGRIHTFPSHMPWWQLDRIYARGFEFERTQALTGREWAQRSDHVPLMA
HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCHHH
ELARRVAIPEV
HHHHHHCCCCC
>Mature Secondary Structure
MKLRVVTYNIHKGVKGFTGKPRIQSVRTGLQSMDADIVFLQEVQDRNDRLIAAELFDPDH
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHCCCCCCEEEEEECCCCC
TQLNYLATDAYPHSVYGRNAVYDHGHHGNAILSRHPILMSENLDISDHRFEQRGLLHAVA
CEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHH
DINGVEAHLICVHFGLFAGSRVRQTTALVERVRSVVPADAPLVIAGDFNDWNHKLDSKIC
CCCCCHHEEHEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
NTLNAVESANAKNGRIHTFPSHMPWWQLDRIYARGFEFERTQALTGREWAQRSDHVPLMA
HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCHHH
ELARRVAIPEV
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]