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The map label for this gene is yqaA [H]

Identifier: 94309311

GI number: 94309311

Start: 388068

End: 388646

Strand: Direct

Name: yqaA [H]

Synonym: Rmet_0366

Alternate gene names: 94309311

Gene position: 388068-388646 (Clockwise)

Preceding gene: 94309302

Following gene: 94309312

Centisome position: 9.88

GC content: 64.08

Gene sequence:

>579_bases
ATGGACGCCTTCATCCACTGGCTGTTTGACACCCTTGCCCTCCCGACGGTGGGGTTGCCCGCCATTTTCGTGGTCAGCCT
GGTGTCGGCCACGCTACTGCCGCTCGGCTCCGAGCCGGCCGTGTTCGGCTACGTCAAGCTCAACCCCGATATGTTCTGGC
CGGCCGTGCTGGTGGCCACGCTCGGTAACACGGTCGGCGGGGCCATCGACTGGTGGATGGGTTACGCGGCCAAGCTTGCC
GTGGTGCGCTATCGGCTACGGCGCCAGAATCGGCAGCATGAGCGCGAACACGAGCAGCACCTGGAACACCCGAAGAAGGC
CAGCAAGCCGGCGCTCGATGCCAAGTACTTCCGCTGGATGCGCCGTTGGGGGCCCCCGACGATGCTGGTGTCGTGGCTTC
CTGGTATTGGTGATCCATTGTGCACTTTGGCGGGCTGGCTGCGGATGCCGTTCTGGCCCAGCGTCGGCTATATGGCCATC
GGCAAGTTCCTGCGTTATCTGGCGATGACGGGCAGCCTGCTGTGGATTCCGGACTCCTTCTGGCACGGCGTGGGCCAGAT
CTTCCACCGGTTGTTCTGA

Upstream 100 bases:

>100_bases
GTGAACGATTGGACGCAAAAGGCTCTCCCAGTTAAACACAAAACCACCGGTGCTGCCATGCGGGTTCTCCTGCGATTCGC
GGCCCTATGTTCTCTAGCGC

Downstream 100 bases:

>100_bases
GCGGGAATGCGCCGGACGGGCAGAAAACGGCGAGATCCCTGACGAAACCAAGGGTTATAGGGGGTTTTCGGGGTTGTTGC
GGTGCGGCAAACATGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDAFIHWLFDTLALPTVGLPAIFVVSLVSATLLPLGSEPAVFGYVKLNPDMFWPAVLVATLGNTVGGAIDWWMGYAAKLA
VVRYRLRRQNRQHEREHEQHLEHPKKASKPALDAKYFRWMRRWGPPTMLVSWLPGIGDPLCTLAGWLRMPFWPSVGYMAI
GKFLRYLAMTGSLLWIPDSFWHGVGQIFHRLF

Sequences:

>Translated_192_residues
MDAFIHWLFDTLALPTVGLPAIFVVSLVSATLLPLGSEPAVFGYVKLNPDMFWPAVLVATLGNTVGGAIDWWMGYAAKLA
VVRYRLRRQNRQHEREHEQHLEHPKKASKPALDAKYFRWMRRWGPPTMLVSWLPGIGDPLCTLAGWLRMPFWPSVGYMAI
GKFLRYLAMTGSLLWIPDSFWHGVGQIFHRLF
>Mature_192_residues
MDAFIHWLFDTLALPTVGLPAIFVVSLVSATLLPLGSEPAVFGYVKLNPDMFWPAVLVATLGNTVGGAIDWWMGYAAKLA
VVRYRLRRQNRQHEREHEQHLEHPKKASKPALDAKYFRWMRRWGPPTMLVSWLPGIGDPLCTLAGWLRMPFWPSVGYMAI
GKFLRYLAMTGSLLWIPDSFWHGVGQIFHRLF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=156, Percent_Identity=31.4102564102564, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21947; Mature: 21947

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFIHWLFDTLALPTVGLPAIFVVSLVSATLLPLGSEPAVFGYVKLNPDMFWPAVLVAT
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH
LGNTVGGAIDWWMGYAAKLAVVRYRLRRQNRQHEREHEQHLEHPKKASKPALDAKYFRWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH
RRWGPPTMLVSWLPGIGDPLCTLAGWLRMPFWPSVGYMAIGKFLRYLAMTGSLLWIPDSF
HHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCHH
WHGVGQIFHRLF
HHHHHHHHHHHC
>Mature Secondary Structure
MDAFIHWLFDTLALPTVGLPAIFVVSLVSATLLPLGSEPAVFGYVKLNPDMFWPAVLVAT
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH
LGNTVGGAIDWWMGYAAKLAVVRYRLRRQNRQHEREHEQHLEHPKKASKPALDAKYFRWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH
RRWGPPTMLVSWLPGIGDPLCTLAGWLRMPFWPSVGYMAIGKFLRYLAMTGSLLWIPDSF
HHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCHH
WHGVGQIFHRLF
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]