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The map label for this gene is fdx4 [H]

Identifier: 94309172

GI number: 94309172

Start: 240781

End: 241185

Strand: Reverse

Name: fdx4 [H]

Synonym: Rmet_0227

Alternate gene names: 94309172

Gene position: 241185-240781 (Counterclockwise)

Preceding gene: 94309177

Following gene: 94309171

Centisome position: 6.14

GC content: 60.25

Gene sequence:

>405_bases
GTGAACACGTATAATTCCGAGCTTCCAATTACGGGCGATGGCAGGCCACGACGCCTCGCCACACCGCGCCCCACGTCAGC
CGTCATGAGCAGCTACTACCAACACCACGTCTTCTTCTGCCTGAACCAGCGCGACGATGGCTCTGCCTGCTGCGCCGATC
ACAATGCGAAGGCCATGCAGGAATACGCCAAGAAACGCTGCAAGGAGCTTGGTATCGCCGGTGGCGAAGGCCGCGTGCGC
ATCAACAAGGCCGGCTGCCTGAACCGCTGTGAACTTGGACCGGTGCTCGTGGTCTACCCCGAGGCCGTCTGGTACACCTT
CGTCGACGAGCAGGACATCGACGAAATCATCGAAAGCCATCTGATCAACGGAAAGCCCGTGCAGCGCCTGATGGTCGATC
GCTGA

Upstream 100 bases:

>100_bases
GCATTCTGGCGTCCATCATGACGGGAGAGCGGCCCGACGGCCCCGGCCAGGGCCCGGATTCCGGAATTCCGTGCACCTCG
TGTTACGCGGAGCGGAGGCC

Downstream 100 bases:

>100_bases
AACGCGTTACCCGCCGAGCCATGCCGGGTCCAGCCCGGTTTTTTGTTGTGCCGCTGTTGTAGTTCCGTAGCTGCGCTGTA
GTTACCCAGTAGTTGCCCAG

Product: putative ferredoxin

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNTYNSELPITGDGRPRRLATPRPTSAVMSSYYQHHVFFCLNQRDDGSACCADHNAKAMQEYAKKRCKELGIAGGEGRVR
INKAGCLNRCELGPVLVVYPEAVWYTFVDEQDIDEIIESHLINGKPVQRLMVDR

Sequences:

>Translated_134_residues
MNTYNSELPITGDGRPRRLATPRPTSAVMSSYYQHHVFFCLNQRDDGSACCADHNAKAMQEYAKKRCKELGIAGGEGRVR
INKAGCLNRCELGPVLVVYPEAVWYTFVDEQDIDEIIESHLINGKPVQRLMVDR
>Mature_134_residues
MNTYNSELPITGDGRPRRLATPRPTSAVMSSYYQHHVFFCLNQRDDGSACCADHNAKAMQEYAKKRCKELGIAGGEGRVR
INKAGCLNRCELGPVLVVYPEAVWYTFVDEQDIDEIIESHLINGKPVQRLMVDR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 15117; Mature: 15117

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYNSELPITGDGRPRRLATPRPTSAVMSSYYQHHVFFCLNQRDDGSACCADHNAKAMQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCEECCCCCHHHHH
EYAKKRCKELGIAGGEGRVRINKAGCLNRCELGPVLVVYPEAVWYTFVDEQDIDEIIESH
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHH
LINGKPVQRLMVDR
CCCCCCHHHHHCCC
>Mature Secondary Structure
MNTYNSELPITGDGRPRRLATPRPTSAVMSSYYQHHVFFCLNQRDDGSACCADHNAKAMQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCEECCCCCHHHHH
EYAKKRCKELGIAGGEGRVRINKAGCLNRCELGPVLVVYPEAVWYTFVDEQDIDEIIESH
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHH
LINGKPVQRLMVDR
CCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]