| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ywhH [H]
Identifier: 94309064
GI number: 94309064
Start: 125870
End: 126367
Strand: Direct
Name: ywhH [H]
Synonym: Rmet_0119
Alternate gene names: 94309064
Gene position: 125870-126367 (Clockwise)
Preceding gene: 94309063
Following gene: 94309065
Centisome position: 3.2
GC content: 67.67
Gene sequence:
>498_bases ATGAGCGAGAGCCCCACGCTTCCCGATGCCGCGCAACGCGTGGCCGATCTGTTGGTCGGCATCGGCCACGACCGCCCCGT GGTGATGCTGCCGGCCACCGGCAAGACCTCGGCGGAAGCGGCTGCCGGTCTGGGCTGCACCGTGGCCGAGATCGCGAAGT CCATCATCTTCCGCCGCGTGGAAGACGATGTGCCGGTGCTGGTGATCGCCAGCGGCAGCAATCGCGTCGACGAGGCCAAG GTGGCGGCGCGCGTGGGCGCGCTGGGCAAGGCCGATGCGAAGTTCGTGCGCGAGAAGACCGGCTACGCGATTGGCGGTGT CTGCCCGATCGGGCACGCCGTCGCACCCGTGATGTTGCTCGATCAGGACCTGTTCCAGTACGACAGCGTGTGGGCAGCAG CGGGACATCCGCATGCCGTCTTCAACCTGACGCCGCAACAGCTTCAGGCGATGACCGGAGCGGAAGTCGCGGACGTGGCC CAGGTGACTTCGGCATGA
Upstream 100 bases:
>100_bases AAGATCCGCCTGCTCGAGTCGGGCAAGCCGATCGCCGGCGTGGTGGACCTGCAGCGCGGCTACTAGACCGCGACGCGCCC AGACAAAGGAGACACGATCC
Downstream 100 bases:
>100_bases CCGCCGCGCAACGCCGTCTGCTGGCCGATCTGGTACGTGGCGCTGCCGCGGCACAGATCGTCGCGCCGGTGCCGTCGCCC TGCCGCAACGTCTGCAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSESPTLPDAAQRVADLLVGIGHDRPVVMLPATGKTSAEAAAGLGCTVAEIAKSIIFRRVEDDVPVLVIASGSNRVDEAK VAARVGALGKADAKFVREKTGYAIGGVCPIGHAVAPVMLLDQDLFQYDSVWAAAGHPHAVFNLTPQQLQAMTGAEVADVA QVTSA
Sequences:
>Translated_165_residues MSESPTLPDAAQRVADLLVGIGHDRPVVMLPATGKTSAEAAAGLGCTVAEIAKSIIFRRVEDDVPVLVIASGSNRVDEAK VAARVGALGKADAKFVREKTGYAIGGVCPIGHAVAPVMLLDQDLFQYDSVWAAAGHPHAVFNLTPQQLQAMTGAEVADVA QVTSA >Mature_164_residues SESPTLPDAAQRVADLLVGIGHDRPVVMLPATGKTSAEAAAGLGCTVAEIAKSIIFRRVEDDVPVLVIASGSNRVDEAKV AARVGALGKADAKFVREKTGYAIGGVCPIGHAVAPVMLLDQDLFQYDSVWAAAGHPHAVFNLTPQQLQAMTGAEVADVAQ VTSA
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007214 [H]
Pfam domain/function: PF04073 YbaK [H]
EC number: NA
Molecular weight: Translated: 17028; Mature: 16896
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESPTLPDAAQRVADLLVGIGHDRPVVMLPATGKTSAEAAAGLGCTVAEIAKSIIFRRV CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH EDDVPVLVIASGSNRVDEAKVAARVGALGKADAKFVREKTGYAIGGVCPIGHAVAPVMLL CCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHH DQDLFQYDSVWAAAGHPHAVFNLTPQQLQAMTGAEVADVAQVTSA HHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure SESPTLPDAAQRVADLLVGIGHDRPVVMLPATGKTSAEAAAGLGCTVAEIAKSIIFRRV CCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH EDDVPVLVIASGSNRVDEAKVAARVGALGKADAKFVREKTGYAIGGVCPIGHAVAPVMLL CCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHH DQDLFQYDSVWAAAGHPHAVFNLTPQQLQAMTGAEVADVAQVTSA HHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]