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The map label for this gene is ychJ [C]

Identifier: 94309056

GI number: 94309056

Start: 117745

End: 118170

Strand: Direct

Name: ychJ [C]

Synonym: Rmet_0111

Alternate gene names: 94309056

Gene position: 117745-118170 (Clockwise)

Preceding gene: 94309055

Following gene: 94309057

Centisome position: 3.0

GC content: 69.95

Gene sequence:

>426_bases
ATGACGAACAAGGGTCGGGCCGGCACCGGCCCGGCACCGTGCCCCTGCGGCAACGGCGCCTACGACACGTGCTGCGGCCG
CTTCCATCGTGGCGAGGCATCGCCACCCACGGCGGAGGCGCTGATGCGGTCGCGTTACAGCGCCTATGTGCTGGGTGACG
TGAGCTGGCTGCGGCAGACCTGGCACGCGTCGACCTGCCCGCCGGACCTCTCGGCCGATCCCGGCACGAACTGGCTCGGG
CTGACCGTGAAGTCCCACGCGCAGCAGGACGCCACGCACGCCACAGTCGAGTTCGTCGCGCGTTACAAGGTGGGGGGCCG
CGCGCACCGGCTGCATGAGCTGAGCCGTTTTGTATTCGAGTCGCGTGAGCCGGGCGAAGCGTCGCGCTGGCTCTACGTGG
ATGGTGACCTGCGCGAACCGGCCTGA

Upstream 100 bases:

>100_bases
CGGTGTTTGGCTACGCCGCGAGCACCAACGCCGACGCCTTGCGCGCGGTTGGCGTGACGACGATCTTCACTGACATGCGC
GAGTTGCCGGGGCTGATCGG

Downstream 100 bases:

>100_bases
CCGGCGCTGCAATACATCCTGGCGAATTGCGCCAGTAACGTTTTCTGAAGAAGGTTGGTTGTGAAGTCTCGCGTCGTCTC
CTCCATCTGCGGCATCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTNKGRAGTGPAPCPCGNGAYDTCCGRFHRGEASPPTAEALMRSRYSAYVLGDVSWLRQTWHASTCPPDLSADPGTNWLG
LTVKSHAQQDATHATVEFVARYKVGGRAHRLHELSRFVFESREPGEASRWLYVDGDLREPA

Sequences:

>Translated_141_residues
MTNKGRAGTGPAPCPCGNGAYDTCCGRFHRGEASPPTAEALMRSRYSAYVLGDVSWLRQTWHASTCPPDLSADPGTNWLG
LTVKSHAQQDATHATVEFVARYKVGGRAHRLHELSRFVFESREPGEASRWLYVDGDLREPA
>Mature_140_residues
TNKGRAGTGPAPCPCGNGAYDTCCGRFHRGEASPPTAEALMRSRYSAYVLGDVSWLRQTWHASTCPPDLSADPGTNWLGL
TVKSHAQQDATHATVEFVARYKVGGRAHRLHELSRFVFESREPGEASRWLYVDGDLREPA

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=129, Percent_Identity=41.8604651162791, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y111_RALME (Q1LS79)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_582266.1
- ProteinModelPortal:   Q1LS79
- SMR:   Q1LS79
- STRING:   Q1LS79
- GeneID:   4036895
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_0111
- eggNOG:   COG3012
- HOGENOM:   HBG609508
- OMA:   RTCPADL
- PhylomeDB:   Q1LS79
- ProtClustDB:   PRK01842
- BioCyc:   RMET266264:RMET_0111-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR023006

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15462; Mature: 15331

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKGRAGTGPAPCPCGNGAYDTCCGRFHRGEASPPTAEALMRSRYSAYVLGDVSWLRQT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHH
WHASTCPPDLSADPGTNWLGLTVKSHAQQDATHATVEFVARYKVGGRAHRLHELSRFVFE
HCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SREPGEASRWLYVDGDLREPA
CCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
TNKGRAGTGPAPCPCGNGAYDTCCGRFHRGEASPPTAEALMRSRYSAYVLGDVSWLRQT
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHH
WHASTCPPDLSADPGTNWLGLTVKSHAQQDATHATVEFVARYKVGGRAHRLHELSRFVFE
HCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SREPGEASRWLYVDGDLREPA
CCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA