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The map label for this gene is oxaA [H]

Identifier: 93007297

GI number: 93007297

Start: 3057589

End: 3059283

Strand: Reverse

Name: oxaA [H]

Synonym: Pcryo_2473

Alternate gene names: 93007297

Gene position: 3059283-3057589 (Counterclockwise)

Preceding gene: 93007298

Following gene: 93007296

Centisome position: 99.98

GC content: 43.54

Gene sequence:

>1695_bases
ATGCAAAAGATATTTCGGGTGATGATCATCATTGCGATGTTAATCACCGCTTATCTGCTGATTTTGGCATGGCGTGATGA
TTATGCAGATGCCCCAGCTGTAGACACGGTGCCAGAAACTGCAGCTTCAGTAGGAGCCGATATTCCTTCTACTAGCGGTG
CAGCAGGTGATATTCCAGTACAGACGCTACCTGTCGACAACGGTACAGTTGATAGCGCTGTGACTGCTACACCTGCTACT
GATGCAGGACTAATCACAGTCACTACTGATCGTTATGACATCAAAATCAATCCAGAAGGCGGTGACATCGTTTATGCTGC
GCTAAAGCAGTATGATGCGACCCTTGATAGCGATAAGCCTTTTGTATTGCTAGAAAACAACAGTAACCGCGTTTACGTGG
CTCAGTCTGGTCTGATTGGTCAAAATGGTATCGATACTGCAGAAGGTCGTGCCAAATACAGCCATACCGCTAACAATTAC
GTGATGGAAAAAGGCCAGCAAACGTTATCAGTGCCGCTTACGTATAAAAAAGATGGCGTGACAGTCACTAAGACTTTTAC
CTTTACACACGATAAATATCCTATCGATATCAGCTATAAGATTCAAAATGCTTCTACAGCGGCGTGGCAAGGTCAGATGT
TTGCGCAGCTAAAGCGTGATGATAGCAAAGATCCCGGTATGTCTGATAAAGGTGCGCTTAGTATGGCAACTTATTTGGGC
GGCGCTTGGGGTACACCCGATGATCCCTATAATAAGCTGAAGTTTGGTAAGTTTAATGATGGTGAATTGACTACAACCAG
TGATAAAGGTTGGGTTGGCATCGTACAGCATTACTTTGTGTCAGCATGGACGCCTGAAAACTTTACTGGTAAATTCTTTA
GCCGCGAAACCGGTGATGATTATTTTATTGGTTTTAATAGTCAGCCTGTCAATGTTGCACCAAACAAGCAAGTAACCTTA
AATGCCACGCTATACGCAGGTCCAAAGGTACAATCTGAGCTTAAGGATGTAGCAGTAGGGTTAAATCAGACAGTCGATTA
TGGTCTGTTATGGCCAATATCAAAGATATTGTTTGGTATTTTGGATGGCATTCATAAAGTCATCGGTAACTGGGGCTGGT
CAATTATTCTATTGACTATCTTAGTGAAGCTGGCATTGATGTGGTTCTCAAACAAGAGCTACTACTCGATGGCGAAGATG
CGTGCGATTGCACCGCGCCTTGCCGCATTAAAAGAAGAGCATGGCGACGATCGCATGAAAATGTCGCAAGAAATGATGGC
AATGTACAAAGAAGAAAAAGTCAATCCAATGGCGGGTTGTTTGCCGATTCTGATGCAGATGCCGATTTTCTTAGCCTTGT
ATTGGGTACTCGTTGAGAGTGTTGAGCTACGTCATGCACCGTGGATTTTGTGGATTCAAGATCTATCAGCGATGGATCCG
TGGTTTATTTTGCCACTATTAATGGGTGCATCGATGTTTATTCAGCAGCAGCTTAATCCACAGCCAGCTGATCCGATGCA
AGCGAAAGTAATGAAGTTCTTACCGATTATTTTCACCGCGTTCATGCTGTTCTTCCCAGCGGGTCTAGTACTATACTGGA
CTGTGAATAACTTATTTAGTATGACGCATCAATATATCGTCAATAAAAAAGTAGAAGAAGAGCAGAAGCTTCGTACGGTT
AAGGTACTGGATTAA

Upstream 100 bases:

>100_bases
TGCTGACATTACTGTTCACTATCTGGGCCAATGCTGTGTGGTGGTCATAACACATGCCCTAGCTTTTTTATTCCCTAATT
TTTTAATCTAGGAAAGGTTT

Downstream 100 bases:

>100_bases
TCATTTAATAGTTTAGAAGTTCAAAAAACCATCGCTACGGCGGTGGTTTTTTTATGCCCTTAATATCATATCTGGTATGA
ATACTTACTTAAGACTACGC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MQKIFRVMIIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPVQTLPVDNGTVDSAVTATPAT
DAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKPFVLLENNSNRVYVAQSGLIGQNGIDTAEGRAKYSHTANNY
VMEKGQQTLSVPLTYKKDGVTVTKTFTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLG
GAWGTPDDPYNKLKFGKFNDGELTTTSDKGWVGIVQHYFVSAWTPENFTGKFFSRETGDDYFIGFNSQPVNVAPNKQVTL
NATLYAGPKVQSELKDVAVGLNQTVDYGLLWPISKILFGILDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKM
RAIAPRLAALKEEHGDDRMKMSQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQDLSAMDP
WFILPLLMGASMFIQQQLNPQPADPMQAKVMKFLPIIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLRTV
KVLD

Sequences:

>Translated_564_residues
MQKIFRVMIIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPVQTLPVDNGTVDSAVTATPAT
DAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKPFVLLENNSNRVYVAQSGLIGQNGIDTAEGRAKYSHTANNY
VMEKGQQTLSVPLTYKKDGVTVTKTFTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLG
GAWGTPDDPYNKLKFGKFNDGELTTTSDKGWVGIVQHYFVSAWTPENFTGKFFSRETGDDYFIGFNSQPVNVAPNKQVTL
NATLYAGPKVQSELKDVAVGLNQTVDYGLLWPISKILFGILDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKM
RAIAPRLAALKEEHGDDRMKMSQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQDLSAMDP
WFILPLLMGASMFIQQQLNPQPADPMQAKVMKFLPIIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLRTV
KVLD
>Mature_564_residues
MQKIFRVMIIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPVQTLPVDNGTVDSAVTATPAT
DAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKPFVLLENNSNRVYVAQSGLIGQNGIDTAEGRAKYSHTANNY
VMEKGQQTLSVPLTYKKDGVTVTKTFTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLG
GAWGTPDDPYNKLKFGKFNDGELTTTSDKGWVGIVQHYFVSAWTPENFTGKFFSRETGDDYFIGFNSQPVNVAPNKQVTL
NATLYAGPKVQSELKDVAVGLNQTVDYGLLWPISKILFGILDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKM
RAIAPRLAALKEEHGDDRMKMSQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQDLSAMDP
WFILPLLMGASMFIQQQLNPQPADPMQAKVMKFLPIIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLRTV
KVLD

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=559, Percent_Identity=41.6815742397138, Blast_Score=424, Evalue=1e-120,
Organism=Drosophila melanogaster, GI24662345, Length=189, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356443, Length=189, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 62850; Mature: 62850

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIFRVMIIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCE
QTLPVDNGTVDSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKP
EEEECCCCCCCCCEEECCCCCCCEEEEEECEEEEEECCCCCCCHHHHHHHHCCCCCCCCC
FVLLENNSNRVYVAQSGLIGQNGIDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYKKDGV
EEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCEEEEEEEEECCCE
TVTKTFTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLG
EEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC
GAWGTPDDPYNKLKFGKFNDGELTTTSDKGWVGIVQHYFVSAWTPENFTGKFFSRETGDD
CCCCCCCCCHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCC
YFIGFNSQPVNVAPNKQVTLNATLYAGPKVQSELKDVAVGLNQTVDYGLLWPISKILFGI
EEEECCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKMRAIAPRLAALKEEHGDDRMK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
MSQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQDLSAMDP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
WFILPLLMGASMFIQQQLNPQPADPMQAKVMKFLPIIFTAFMLFFPAGLVLYWTVNNLFS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH
MTHQYIVNKKVEEEQKLRTVKVLD
HHHHHHHCCHHHHHHHHCEEECCC
>Mature Secondary Structure
MQKIFRVMIIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCE
QTLPVDNGTVDSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKP
EEEECCCCCCCCCEEECCCCCCCEEEEEECEEEEEECCCCCCCHHHHHHHHCCCCCCCCC
FVLLENNSNRVYVAQSGLIGQNGIDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYKKDGV
EEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCEEEEEEEEECCCE
TVTKTFTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLG
EEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC
GAWGTPDDPYNKLKFGKFNDGELTTTSDKGWVGIVQHYFVSAWTPENFTGKFFSRETGDD
CCCCCCCCCHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCC
YFIGFNSQPVNVAPNKQVTLNATLYAGPKVQSELKDVAVGLNQTVDYGLLWPISKILFGI
EEEECCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKMRAIAPRLAALKEEHGDDRMK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
MSQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQDLSAMDP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
WFILPLLMGASMFIQQQLNPQPADPMQAKVMKFLPIIFTAFMLFFPAGLVLYWTVNNLFS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH
MTHQYIVNKKVEEEQKLRTVKVLD
HHHHHHHCCHHHHHHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA